Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0060
         (767 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0186 - 1561695-1561958,1562041-1562183,1562260-1562326,156...    29   5.4  
05_07_0028 + 27153663-27153932,27154966-27155175,27156220-271564...    28   7.1  
04_01_0374 + 4914864-4914947,4915094-4915217,4921146-4921471,492...    28   7.1  
12_02_0938 - 24576419-24576719,24576817-24576969,24577052-245778...    28   9.4  

>08_01_0186 -
           1561695-1561958,1562041-1562183,1562260-1562326,
           1562417-1562529,1562603-1562671,1563831-1563870,
           1563965-1564035,1565872-1566027,1566104-1566152,
           1566228-1567631
          Length = 791

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 18/63 (28%), Positives = 27/63 (42%)
 Frame = -2

Query: 409 LPTVPGIEAVTFVNFLSAFRCLSNVVSQEVGALNVAVFAWTGAFAAPVPVVDWNNP*SFE 230
           +P       V   N+  AF+   N++       N+    W G F APV VV  N P  F+
Sbjct: 145 VPPSAATPVVRSANYAEAFKQCGNLLK------NLFKHQWAGPFLAPVDVVQLNIPDYFD 198

Query: 229 PLR 221
            ++
Sbjct: 199 IIK 201


>05_07_0028 +
           27153663-27153932,27154966-27155175,27156220-27156414,
           27156491-27156840,27157198-27157423,27157524-27157692,
           27158145-27158990,27159647-27159818,27159934-27160052,
           27160117-27160155,27161033-27161157,27161250-27161309,
           27161471-27161542,27161980-27162114
          Length = 995

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 19/60 (31%), Positives = 25/60 (41%)
 Frame = -2

Query: 349 CLSNVVSQEVGALNVAVFAWTGAFAAPVPVVDWNNP*SFEPLRFVFVLDVSRLLSCSTRH 170
           CL  +V  E   L   VFAW G  A      D+ +P S   +R    +D +    CS  H
Sbjct: 212 CLHKIVPDEK-LLQQVVFAWIGGEAVKTISHDFCSPCSKSNVRCKDAIDQTDKYGCSHEH 270


>04_01_0374 +
           4914864-4914947,4915094-4915217,4921146-4921471,
           4921527-4921658,4921824-4922362,4922445-4922597,
           4922695-4922995
          Length = 552

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 19/58 (32%), Positives = 26/58 (44%)
 Frame = +3

Query: 126 LRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDYGLFQSTTGTGAAKAPVQAK 299
           L  H  +E +MR+W+ LV     + +  T  N N SKDY   + T     A  P   K
Sbjct: 443 LWSHQDKEYIMRHWILLV--IVPKWSRVTYLNSNKSKDYDFTEITKALNMAWGPYVEK 498


>12_02_0938 -
           24576419-24576719,24576817-24576969,24577052-24577884,
           24577966-24578427,24578506-24579213
          Length = 818

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = +3

Query: 135 HGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDYGLFQSTTGTGAAKAPVQAK 299
           H  +E +MR+W+ LV     + +  T  N N SKDY   + T     A  P   K
Sbjct: 712 HQDKEYIMRHWILLV--IVPKWSRVTYLNSNKSKDYDFSEITKALNMAWGPYVEK 764


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,067,722
Number of Sequences: 37544
Number of extensions: 343089
Number of successful extensions: 800
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 800
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)