Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0060
         (767 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    25   0.59 
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    25   0.59 
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    25   0.59 
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    25   0.59 
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    25   0.59 
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    25   0.77 
AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    25   0.77 
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    25   0.77 
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    25   0.77 
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    25   0.77 
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   4.1  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    23   4.1  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   4.1  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   5.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   5.5  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   5.5  

>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 25.4 bits (53), Expect = 0.59
 Identities = 11/41 (26%), Positives = 24/41 (58%)
 Frame = +3

Query: 120 HELRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 242
           +E +K+    N +RN     +H SSR + + + +R+ +++Y
Sbjct: 205 NESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 245


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 25.4 bits (53), Expect = 0.59
 Identities = 11/41 (26%), Positives = 24/41 (58%)
 Frame = +3

Query: 120 HELRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 242
           +E +K+    N +RN     +H SSR + + + +R+ +++Y
Sbjct: 194 NESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 234


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 25.4 bits (53), Expect = 0.59
 Identities = 11/41 (26%), Positives = 24/41 (58%)
 Frame = +3

Query: 120 HELRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 242
           +E +K+    N +RN     +H SSR + + + +R+ +++Y
Sbjct: 210 NESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 250


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 25.4 bits (53), Expect = 0.59
 Identities = 11/41 (26%), Positives = 24/41 (58%)
 Frame = +3

Query: 120 HELRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 242
           +E +K+    N +RN     +H SSR + + + +R+ +++Y
Sbjct: 205 NESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 245


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 25.4 bits (53), Expect = 0.59
 Identities = 11/41 (26%), Positives = 24/41 (58%)
 Frame = +3

Query: 120 HELRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 242
           +E +K+    N +RN     +H SSR + + + +R+ +++Y
Sbjct: 205 NESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 245


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = +3

Query: 120 HELRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 242
           +E +K+    N +RN     +H SSR + +   +R+ +++Y
Sbjct: 205 NESKKYATSSNSLRNRTHDFQHTSSRYSRERRCSRDRNREY 245


>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +3

Query: 123 ELRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 242
           E +K+    N +RN     +H SSR + + + +R+ +++Y
Sbjct: 195 ESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 234


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +3

Query: 123 ELRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 242
           E +K+    N +RN     +H SSR + + + +R+ +++Y
Sbjct: 206 ESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 245


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +3

Query: 123 ELRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 242
           E +K+    N +RN     +H SSR + + + +R+ +++Y
Sbjct: 206 ESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 245


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +3

Query: 123 ELRKHGFEENLMRNWVCLVEHESSRDTSKTNTNRNGSKDY 242
           E +K+    N +RN     +H SSR + + + +R+ +++Y
Sbjct: 195 ESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREY 234


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -2

Query: 292 WTGAFAAPVPVVDWNNP*SFEPLRF 218
           W  AFA       + NP SF+P RF
Sbjct: 397 WIPAFAIHRDSAIYPNPDSFDPERF 421


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = -3

Query: 570 GRCSNYIQIS 541
           GRCS+Y+Q+S
Sbjct: 55  GRCSSYLQVS 64


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 227 RLEGLRIVPVNDRYWCSKGA 286
           R E LRI  + D Y+C  GA
Sbjct: 311 RFEQLRIKILGDCYYCISGA 330


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = +2

Query: 194 P*HVQDEHEP*RLEGLRIVPVNDRY-WCSKGASPGKDCNVK 313
           P H  D+HE  +L    I P N+ Y W      PGK  N K
Sbjct: 122 PNHTSDQHEWFQLSLKNIEPYNNYYIW-----HPGKIVNGK 157


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 460  QWNLAAANIR*GALAVVLPTVP 395
            +WN  + N++ G   VVL  VP
Sbjct: 1505 EWNQVSNNVKPGGNFVVLDLVP 1526


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = +2

Query: 194 P*HVQDEHEP*RLEGLRIVPVNDRY-WCSKGASPGKDCNVK 313
           P H  D+HE  +L    I P N+ Y W      PGK  N K
Sbjct: 122 PNHTSDQHEWFQLSLKNIEPYNNYYIW-----HPGKIVNGK 157


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,008
Number of Sequences: 438
Number of extensions: 3962
Number of successful extensions: 22
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)