Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0059
         (694 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0330 + 16731390-16731699,16731774-16732080,16732182-167335...    30   1.5  
03_05_0862 + 28353235-28354431                                         29   2.6  
03_02_0520 + 9092020-9092079,9092253-9093047                           29   4.6  
01_07_0346 + 42889121-42890406,42896115-42896118                       29   4.6  
07_03_1764 + 29322683-29323387,29323809-29323889,29323968-293240...    28   6.1  
06_01_0985 - 7646772-7647451,7647957-7648107                           28   8.1  
05_06_0246 + 26656629-26656907,26657001-26657228,26657595-266576...    28   8.1  
04_01_0423 - 5597068-5597109,5597181-5597309,5597490-5598431           28   8.1  

>09_04_0330 +
           16731390-16731699,16731774-16732080,16732182-16733561,
           16734064-16734112
          Length = 681

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +2

Query: 344 KSTAAQGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQ 478
           K  AA   VCE +  G+ + +C      + D  RM C +  E WQ
Sbjct: 602 KEEAAAAAVCEGSGGGERVVDCACGA-VDDDGERMACCDICEAWQ 645


>03_05_0862 + 28353235-28354431
          Length = 398

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = -1

Query: 586 LGSSVILDLKRGGIADHGTDQSCRGIASLAVYFAIRLPGFVEVCAH 449
           +G   +L    G +A   + + C G+    VYFA+ L G   VCA+
Sbjct: 317 IGDVAVLVDASGAVA--ASTRECPGLRPSTVYFAVDLAGETRVCAY 360


>03_02_0520 + 9092020-9092079,9092253-9093047
          Length = 284

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = -1

Query: 214 VLDVFSLRDVPAAELLRRWTFSSR 143
           VLD+ +++ +PA  +L+RWT  +R
Sbjct: 138 VLDLMNIKSLPAQYILKRWTREAR 161


>01_07_0346 + 42889121-42890406,42896115-42896118
          Length = 429

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 26/87 (29%), Positives = 38/87 (43%)
 Frame = +3

Query: 318 NQHGRPLPESPLQRRDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYT 497
           +QHG P     ++RR  +++ T   T   ++SR  P     D    Q S  P   +    
Sbjct: 169 DQHGEPDARLDIERRR-NSRRTPRATEGASSSRVSPRHGRED----QPSVPPAGGVG--- 220

Query: 498 ASDAMPRQL*SVPWSAIPPRFKSSITE 578
              A    L +V W   PPRF+ +ITE
Sbjct: 221 -CRAFVASLRNVRW---PPRFRPTITE 243


>07_03_1764 +
           29322683-29323387,29323809-29323889,29323968-29324072,
           29324453-29325382,29326728-29326856,29326953-29327042,
           29327237-29327293,29327362-29327394
          Length = 709

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
 Frame = +1

Query: 406 LHQGLSLRDRLQTHGVHKLQRNLA---IGLRSIPPAMLCLDNSDQCRGPQYH--HVSNRV 570
           L  G   R +L T   H+L+ N +   +G     P  LCL  S  CRG   H   V  + 
Sbjct: 625 LPAGCPCRGQLLTMD-HRLEENASGGEVGPLGCWPGGLCLSRSIGCRGAISHVDQVKRQR 683

Query: 571 LRNCREMP 594
              CR++P
Sbjct: 684 HAGCRDLP 691


>06_01_0985 - 7646772-7647451,7647957-7648107
          Length = 276

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -1

Query: 214 VLDVFSLRDVPAAELLRRWTFSSR 143
           VLDV +++ +P   +L+RWT  +R
Sbjct: 240 VLDVMNIKSLPKRYILKRWTREAR 263


>05_06_0246 +
           26656629-26656907,26657001-26657228,26657595-26657630,
           26658362-26658475,26658562-26659167
          Length = 420

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -2

Query: 237 SSKLSDIPCSMCSASEMSPRPSCSDVG 157
           S+  SD PC + SAS  S  P+ SD G
Sbjct: 310 SASSSDFPCDVSSASTSSATPARSDGG 336


>04_01_0423 - 5597068-5597109,5597181-5597309,5597490-5598431
          Length = 370

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -1

Query: 214 VLDVFSLRDVPAAELLRRWTFSSR 143
           VLD+ ++  +PA  +L+RWT  +R
Sbjct: 196 VLDLMNIESLPAQYILKRWTREAR 219


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,213,667
Number of Sequences: 37544
Number of extensions: 391635
Number of successful extensions: 1153
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1153
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)