Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0059
(694 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_45722| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.072
SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.095
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 33 0.17
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 33 0.22
SB_51009| Best HMM Match : 7tm_1 (HMM E-Value=2.8e-14) 33 0.22
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0) 32 0.38
SB_11015| Best HMM Match : 7tm_2 (HMM E-Value=0.00048) 32 0.51
SB_43077| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_39766| Best HMM Match : RVT_1 (HMM E-Value=1.8e-07) 31 0.67
SB_7030| Best HMM Match : Kazal_2 (HMM E-Value=4.6e-08) 31 0.67
SB_54868| Best HMM Match : Rhabdo_NV (HMM E-Value=1.1) 31 0.89
SB_9563| Best HMM Match : Kazal_1 (HMM E-Value=1.7e-07) 30 1.5
SB_33509| Best HMM Match : Kazal_1 (HMM E-Value=2.3e-26) 30 2.0
SB_17430| Best HMM Match : Kazal_1 (HMM E-Value=1e-07) 29 2.7
SB_13131| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_1345| Best HMM Match : IBN_N (HMM E-Value=0.84) 29 2.7
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 29 3.6
SB_22177| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=4.5e-11) 29 3.6
SB_44331| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_56344| Best HMM Match : Kazal_2 (HMM E-Value=1.5e-09) 29 4.7
SB_3697| Best HMM Match : Mucin (HMM E-Value=4.2) 28 6.2
SB_43190| Best HMM Match : GKAP (HMM E-Value=1.6e-09) 28 8.3
SB_38061| Best HMM Match : DUF995 (HMM E-Value=4) 28 8.3
SB_33512| Best HMM Match : Kazal_1 (HMM E-Value=2.6e-20) 28 8.3
SB_15403| Best HMM Match : CH (HMM E-Value=0) 28 8.3
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 35.9 bits (79), Expect = 0.031
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +2
Query: 371 CEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 508
CE+ ++ +A+C C KDCP E D+ VC +T+ ++C + +Q C
Sbjct: 1779 CEVKDN-EAVCECPKDCPKE-DAE--VCGTNWKTYTNECMMRKQAC 1820
Score = 35.5 bits (78), Expect = 0.041
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +2
Query: 359 QGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 508
QG VC + C C CP S+R VC + T+ S CE++R C
Sbjct: 2986 QGEVCVTDSRNVPRCVCPPGCPPAEVSQR-VCASDGLTYPSVCEMHRTAC 3034
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 398 MCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCYASTTL 526
+C C ++C D VC + N T+ ++C + +Q C A+TT+
Sbjct: 1203 VCACPENCSSTVDP---VCGSDNNTYDNECLMRQQACVANTTV 1242
Score = 31.9 bits (69), Expect = 0.51
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 371 CEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCYASTTL 526
C+ + G A C C +DCP + + VC + N + ++C + + C + T+
Sbjct: 1362 CQAKD-GKATCECSEDCP---KTLKPVCGSDNNDYDNECLMQARACATNKTI 1409
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 1/103 (0%)
Frame = +2
Query: 215 GMSESLDEKRYHEEK*PELTTFSTRSLMKRMKTKKSTWKTLA*KSTAAQGRVCEINEH-G 391
G++ S+D+ TF T S + ++ A CE ++ G
Sbjct: 154 GITSSVDKSELESIASSPNMTFYTESFASLRTITEQLQNSVCKLFAMAPYSDCEADKSSG 213
Query: 392 DAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCYAST 520
C C DC ++D VC + N T+ S+C++ R C T
Sbjct: 214 VITCKC-PDCKDKSDP---VCGSDNVTYASECQLRRAACLNDT 252
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 398 MCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCYASTTL 526
+C C ++C D VC N T+ ++C + +Q C A+ T+
Sbjct: 1132 VCACPENCSSTVDP---VCGTDNNTYDNECLMRQQACVANATV 1171
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 398 MCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCYASTTL 526
+C C K CP D VC + N T+ ++C + + C ++ L
Sbjct: 1577 ICVCPKICPITLDP---VCASDNNTYPNECAMKQLACQSAKVL 1616
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +2
Query: 398 MCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 508
+C+C DC ET + +C + +T+ ++C + ++ C
Sbjct: 2151 VCSCPDDCTNET---KPICASDGQTYDNECLMQKRAC 2184
>SB_45722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1080
Score = 34.7 bits (76), Expect = 0.072
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 344 KSTAAQGRVCEINEHGDAM-CNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 508
+S +GR C I E G++ C C C E VC+ F S+CE+++Q C
Sbjct: 602 QSICPRGRECIIGEDGNSTSCECSAVCSSE---HAPVCSVFYTDHASECEMHKQAC 654
>SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 344
Score = 34.3 bits (75), Expect = 0.095
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 362 GRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 508
G+ C + G A C C+ +CP D + VC + T+ + CE++R C
Sbjct: 67 GQEC-VAAKGKASCECLSECP---DHIKPVCGSDGVTYPNHCELHRIAC 111
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 389 GDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCYASTTL 526
G A+C C +CP E VC T+ S C + + C A T++
Sbjct: 797 GSAVCECNTECPSEASP---VCGQDGRTYSSTCAMDARACQAQTSI 839
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/67 (23%), Positives = 29/67 (43%)
Frame = +2
Query: 371 CEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCYASTTLISAVVRNT 550
C G +C C+ CP + + VC + T++S+CE+ + C A + +
Sbjct: 1419 CFPQADGTGVCICLDQCPPDNQNAS-VCGSDLVTYRSECELKAKSCNAMRNVTTLFKGEC 1477
Query: 551 TTFQIEY 571
+ I Y
Sbjct: 1478 ANYYISY 1484
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 344 KSTAAQ-GRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 508
KS Q G CEI E G +C C C D VC + +T+ + C + + C
Sbjct: 1800 KSATCQFGGRCEIQEDGTEVCICPTYCRLNYDP---VCGSNRKTYLNFCSLTAEAC 1852
>SB_51009| Best HMM Match : 7tm_1 (HMM E-Value=2.8e-14)
Length = 579
Score = 33.1 bits (72), Expect = 0.22
Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 3/103 (2%)
Frame = +2
Query: 359 QGRVCEINEHGD---AMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCYASTTLI 529
+G VC GD C C CP D VC+ FN+ +++ CE+++ YA +
Sbjct: 124 RGGVCTPYVEGDRSYTTCECPTSCPDLDDP---VCSIFNQEFKNACEMHK---YACKLQM 177
Query: 530 SAVVRNTTTFQIEYYGTAEKCLTALKAEMSDFPRRMXDLAFLT 658
S ++N K + FP R D +LT
Sbjct: 178 SMAIKNAGACVKPTDPKMMGMTDCPKWMLEQFPYRFLDWLYLT 220
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +2
Query: 371 CEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCYASTTLISA 535
C++ + G C C C YE VC +T+ + CE+ C ST + A
Sbjct: 1283 CQVEDDGSTSCKCPIFCTYE---YMPVCGTDGKTYGNKCEMRASACLKSTMVTVA 1334
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 359 QGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCYASTTL 526
+G+ C + +G A C C CP D VC + +T+ + C++ C T L
Sbjct: 1581 KGKRCLL-VNGTATCECFSACP---DIYDPVCASNGKTYSNRCDMDADACIRDTKL 1632
>SB_35516| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 320
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 398 MCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCYASTTL 526
+C C ++C D VC + N T+ ++C + +Q C A+TT+
Sbjct: 272 VCACPENCSSTVDP---VCGSDNNTYDNECLMRQQACVANTTV 311
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 398 MCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCYASTTL 526
+C C ++C D VC N T+ ++C + +Q C A+ T+
Sbjct: 158 VCACPENCSSTVDP---VCGTDNNTYDNECLMRQQACVANATV 197
>SB_11015| Best HMM Match : 7tm_2 (HMM E-Value=0.00048)
Length = 283
Score = 31.9 bits (69), Expect = 0.51
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -1
Query: 592 AFLGSSVILDLKRGGIADHGTDQSCRGIASLAVYFAIRLP 473
AF+G+SV++DL G D+G + C + + FA +P
Sbjct: 220 AFVGASVVIDLTVPGAIDYGKGEFCYITSRFGLIFAFLVP 259
>SB_43077| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 31.5 bits (68), Expect = 0.67
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 371 CEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCY 511
CE DA C C + CP D VC ET+ + C + + C+
Sbjct: 314 CEAFAADDAQCVCPRKCPSYVD---QVCATNGETFDNLCRLKKHVCH 357
>SB_39766| Best HMM Match : RVT_1 (HMM E-Value=1.8e-07)
Length = 392
Score = 31.5 bits (68), Expect = 0.67
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +2
Query: 449 VCTNFNETWQSDCEVYRQRCYASTTLISAVVRNTTTFQIEYYGTAEKCLTALKAEMSDFP 628
+ T+F+ + YR++ TTLI N T +++ YG + CL L++ +SD
Sbjct: 178 LATSFDSLMYVNSSAYRKQYSCETTLI-----NLTESKLKAYGAQDTCLRLLESYLSDRR 232
Query: 629 RRM 637
R+
Sbjct: 233 NRV 235
>SB_7030| Best HMM Match : Kazal_2 (HMM E-Value=4.6e-08)
Length = 286
Score = 31.5 bits (68), Expect = 0.67
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 371 CEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCY 511
CE DA C C + CP D VC ET+ + C + + C+
Sbjct: 48 CEAFAADDAQCVCPRKCPSYVD---QVCATNGETFDNLCRLKKHVCH 91
>SB_54868| Best HMM Match : Rhabdo_NV (HMM E-Value=1.1)
Length = 775
Score = 31.1 bits (67), Expect = 0.89
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 425 YETDSRRMVCTNFNETWQSDCEVYRQRCYASTTLISAVVRNTT 553
Y + RMVC W ++ + + +CY T L +V+R+ +
Sbjct: 5 YFASNSRMVCHQRQVCWATNADCFGNQCYCCTRLKGSVLRHAS 47
>SB_9563| Best HMM Match : Kazal_1 (HMM E-Value=1.7e-07)
Length = 170
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +2
Query: 371 CEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCY 511
CE DA C C + CP D VC ET+ + C + + C+
Sbjct: 91 CEAFAADDAQCVCPRKCPSYVD---QVCATNGETFDNLCLLKKHVCH 134
>SB_33509| Best HMM Match : Kazal_1 (HMM E-Value=2.3e-26)
Length = 143
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 398 MCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCYASTTL 526
+C C ++C D VC N T+ ++C + +Q C A+ T+
Sbjct: 24 VCACPENCSSTVDP---VCGTDNNTYDNECLMRQQACVANATV 63
>SB_17430| Best HMM Match : Kazal_1 (HMM E-Value=1e-07)
Length = 396
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +2
Query: 371 CEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 508
C+ DA C C + CP D R C + T+++DC + C
Sbjct: 9 CKAYGPKDARCECAESCPTYDDER---CGSDGVTYKNDCLYKKYIC 51
>SB_13131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +2
Query: 371 CEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 508
C+ DA C C + CP D R C + T+++DC + C
Sbjct: 163 CKAYGPKDARCECAESCPTYDDER---CGSDGVTYKNDCLYKKYIC 205
>SB_1345| Best HMM Match : IBN_N (HMM E-Value=0.84)
Length = 746
Score = 29.5 bits (63), Expect = 2.7
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = +2
Query: 374 EINEHGDAMCNCIKDCPY----ETDSRRMVCTNFNETWQSDCEVYRQRCYASTTLISAVV 541
++ EH +C+ C + E+D + N+ Q+DC V++QR ++S +V
Sbjct: 67 QLMEHSVKYASCVPFCTWMAELESDLMNVFRFNWGSMQQNDCAVFKQR------VMSLLV 120
Query: 542 RNTTTFQIEYYGTAEKCLTALKAEMS 619
T E Y E L L AE++
Sbjct: 121 NGTKPMSEEPYHLKES-LARLVAEVA 145
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 374 EINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQ 502
+I EHGD +KDC E ++ ++ C N Q+ C + Q
Sbjct: 2540 DIKEHGDHHTLIVKDCRPE-ETGKLTCKARNSAGQAICSCFVQ 2581
>SB_22177| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=4.5e-11)
Length = 1170
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +3
Query: 351 LQRRDVSAKSTNTETPCVTASRTVPTRQ 434
L+R +++ + + + PC+TASR P+RQ
Sbjct: 940 LRRAEMNYEQKHPKAPCLTASRPPPSRQ 967
>SB_44331| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1916
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/55 (29%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +3
Query: 324 HGRPLPESPLQ-RRDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRI 485
H P P Q D + T T TP + ++ T AWCA+ + N I
Sbjct: 78 HDTEKPSDPCQLTADQNPYPTQTPTPALESAPAAMPDATDTAWCAKLGIQERNAI 132
>SB_56344| Best HMM Match : Kazal_2 (HMM E-Value=1.5e-09)
Length = 217
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/55 (23%), Positives = 23/55 (41%)
Frame = +2
Query: 344 KSTAAQGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 508
K G +C + G C C CP ++ VC+ + + + CE++ C
Sbjct: 16 KRVCMWGEMCRADSSGFTYCECPVSCP---NTYEPVCSVYGIQFPNKCELHMFAC 67
>SB_3697| Best HMM Match : Mucin (HMM E-Value=4.2)
Length = 120
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +3
Query: 357 RRDVSAKSTNTETPCVTASRTV-PTRQTPDAWCAQTSTKPGNRIAKYTASDAMPRQL*SV 533
R +AKS T TP ++ T PTR + A+ TKP + +S P++ +
Sbjct: 34 RNTRTAKSHTTTTPSTSSGTTSKPTRVPSNPTMAKVITKPRTTSSTPGSSSTTPQKPATT 93
Query: 534 PWSAIP 551
S IP
Sbjct: 94 EHSTIP 99
>SB_43190| Best HMM Match : GKAP (HMM E-Value=1.6e-09)
Length = 816
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = +3
Query: 342 ESPLQRRDVSAKSTNTETPCVTASRTV-PTRQTPDAWCAQTSTKPGNRIAKYT 497
E+ L + KS N T + P + PDA + KPG I K T
Sbjct: 179 ENTLPGDKKAVKSNNGSTKLANKQENIGPNKTKPDAKTPANANKPGKEITKQT 231
>SB_38061| Best HMM Match : DUF995 (HMM E-Value=4)
Length = 220
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +2
Query: 164 SEQLGRGDISEAEHIEHGMSESLDEKRYHEEK*PELTTFSTRSLMKRMKTKK 319
S G +++E EH E SE D+K + K + + R L KR++ KK
Sbjct: 115 SSDSGNSEVTEQEHDEDANSEENDDKPTRKTKLDK----AQRKLNKRLRQKK 162
>SB_33512| Best HMM Match : Kazal_1 (HMM E-Value=2.6e-20)
Length = 87
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 449 VCTNFNETWQSDCEVYRQRCYASTTL 526
VC + N T+ ++C + +Q C A+TT+
Sbjct: 10 VCGSDNNTYDNECLMRQQACVANTTV 35
>SB_15403| Best HMM Match : CH (HMM E-Value=0)
Length = 1907
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/58 (27%), Positives = 23/58 (39%)
Frame = +2
Query: 362 GRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCYASTTLISA 535
G VC+ G C C C T VC + T+ + C + RC + T + A
Sbjct: 709 GGVCQAGADGKTKCVCSAAC---TREYAPVCGSDGNTYNNLCLLTAARCQSQTFIYRA 763
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,462,944
Number of Sequences: 59808
Number of extensions: 441181
Number of successful extensions: 1596
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1594
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1805522550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -