Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0059
         (694 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              39   5e-05
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    27   0.22 
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   2.1  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   8.4  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   8.4  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 38.7 bits (86), Expect = 5e-05
 Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
 Frame = +2

Query: 362 GRVCEINEHGD-AMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCYASTTLISAV 538
           G+ CE++ +   A+C C++ CP      R VC +  + + + CE++R  C++ ++L  + 
Sbjct: 90  GKECELSPNSTIAVCVCMRKCPRR---HRPVCASNGKIYANHCELHRAACHSGSSLTKSR 146

Query: 539 VRNTTTFQIE 568
           +       IE
Sbjct: 147 LMRCLHHDIE 156


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 18/52 (34%), Positives = 22/52 (42%)
 Frame = +2

Query: 365 RVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCYAST 520
           +VC    H D+ C C+       DS   V  NFNE+     E  R  C  ST
Sbjct: 344 QVCRSRRHSDSCCLCL-------DSMNAVIRNFNES-----ENRRNSCLGST 383


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +2

Query: 362 GRVCEINEHGDAMCNCIKDCPYETDSRRMVC 454
           G  C   EH       + DC  E  +RR +C
Sbjct: 298 GTKCVSGEHLSVSGGALNDCHAEVVARRCLC 328


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 11/34 (32%), Positives = 13/34 (38%)
 Frame = +2

Query: 473 WQSDCEVYRQRCYASTTLISAVVRNTTTFQIEYY 574
           WQ    + + R Y S T     V     F IE Y
Sbjct: 100 WQWGLGICKLRAYVSETSSYVSVLTIVAFSIERY 133


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 200 QPPRCPRGR 174
           QPP+CPR R
Sbjct: 564 QPPQCPRFR 572


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,331
Number of Sequences: 438
Number of extensions: 3460
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)