Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0058
         (768 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    26   1.1  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    26   1.5  
AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    25   1.9  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    25   1.9  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   1.9  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   5.9  
DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    23   7.9  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    23   7.9  

>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = +1

Query: 556 KQTPTPKP-HGLTGVNSVERVLRXNWXLAXPLSTDNGRFVSSCTNRGITTKAXVLSKAK 729
           K  P P   H +    ++ER+ +    LA   +   G +   CT +G +  A V++ AK
Sbjct: 464 KDYPLPMVNHAIASRANMERIKQVYQHLAKYRTPSGGCYEGDCTEKGGSAIAGVMTAAK 522


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 8/23 (34%), Positives = 17/23 (73%)
 Frame = +2

Query: 194 QEERSHHKCRKQTHTKQQDERME 262
           +EE+ H +C KQ+ T + ++++E
Sbjct: 483 REEKHHERCAKQSETTRIEKQLE 505


>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +1

Query: 367 QARRSCFDVAR*QQQRWQTCLRRWQGQDESKS 462
           Q  + C    R +    QT LRR Q QDE ++
Sbjct: 66  QCEKCCLTAERQRVMALQTALRRAQTQDEQRA 97


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +1

Query: 367 QARRSCFDVAR*QQQRWQTCLRRWQGQDESKS 462
           Q  + C    R +    QT LRR Q QDE ++
Sbjct: 66  QCEKCCLTAERQRVMALQTALRRAQTQDEQRA 97


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +2

Query: 350 NIKLMYKRDGLALTLRDDSNNDGRLAYGDGKDKTSPKVSWKFVP 481
           N+K+  K+  +    R ++ ND  +  G  K   S K+ W   P
Sbjct: 680 NVKIETKKIDIKAAPRIEAKNDAYIPKGGDKKIISTKLQWNAKP 723


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +2

Query: 551 VKNKPRPQNHMGLRGSTASKGF*GPIG 631
           +K     +   GL G    KGF GP+G
Sbjct: 662 IKGDKGEKGENGLMGIKGEKGFPGPVG 688


>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 376 RSCFDVAR*QQQRWQTCLRRWQGQDESKS 462
           + C    R +    QT LRR Q QDE ++
Sbjct: 69  KCCLTAERQRVMALQTALRRAQTQDEQRA 97


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 376 RSCFDVAR*QQQRWQTCLRRWQGQDESKS 462
           + C    R +    QT LRR Q QDE ++
Sbjct: 69  KCCLTAERQRVMALQTALRRAQTQDEQRA 97


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 737,263
Number of Sequences: 2352
Number of extensions: 13272
Number of successful extensions: 77
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 76
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)