Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0058
         (768 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49128-2|CAA88959.1|  848|Caenorhabditis elegans Hypothetical pr...    32   0.52 
U22831-4|AAK20066.1|  633|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z66561-1|CAA91454.1|  635|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z80344-2|CAB02487.3|  608|Caenorhabditis elegans Hypothetical pr...    29   4.8  
Z74030-16|CAI79165.1|  481|Caenorhabditis elegans Hypothetical p...    29   4.8  
Z74030-15|CAI79164.1|  477|Caenorhabditis elegans Hypothetical p...    29   4.8  
Z74030-7|CAA98447.2|  559|Caenorhabditis elegans Hypothetical pr...    29   4.8  
Z74030-6|CAA98444.2|  508|Caenorhabditis elegans Hypothetical pr...    29   4.8  
U41021-7|AAL02487.1|  680|Caenorhabditis elegans Hypothetical pr...    29   4.8  
U41021-6|AAL02488.1|  713|Caenorhabditis elegans Hypothetical pr...    29   4.8  
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation...    29   4.8  
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini...    29   4.8  
U80848-1|AAB37990.3|  389|Caenorhabditis elegans Hypothetical pr...    28   6.4  
U41026-3|AAL02447.3|  817|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z81046-4|CAB02825.1|  278|Caenorhabditis elegans Hypothetical pr...    28   8.4  
Z49207-3|CAA89071.1|  927|Caenorhabditis elegans Hypothetical pr...    28   8.4  

>Z49128-2|CAA88959.1|  848|Caenorhabditis elegans Hypothetical
           protein M03C11.2 protein.
          Length = 848

 Score = 31.9 bits (69), Expect = 0.52
 Identities = 17/69 (24%), Positives = 30/69 (43%)
 Frame = -3

Query: 562 FVFN*QTSNTDYAECSQSEVDLVVLPQRNELPADFWTRLVLAIAVGKSAIVVAVIAQRQS 383
           F+FN Q    ++    + E    V  +  +  +D W R   A    K AI+ AV+  + S
Sbjct: 670 FLFNFQKKMKEFGILKRIEEKKAVFTESRQPTSDVWDRFSRAAKTSKGAILFAVVGGKMS 729

Query: 382 KTVALVHQL 356
           + +    +L
Sbjct: 730 EGINFCDEL 738


>U22831-4|AAK20066.1|  633|Caenorhabditis elegans Hypothetical
           protein F47D12.5 protein.
          Length = 633

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 18/65 (27%), Positives = 31/65 (47%)
 Frame = +2

Query: 290 SKDIVRECFPVEFTLIFAENNIKLMYKRDGLALTLRDDSNNDGRLAYGDGKDKTSPKVSW 469
           +  ++RECFP    +I    +   +Y ++G+   +  DS  DG L +     K+S +   
Sbjct: 543 ANSLIRECFPEISNVIKIPVSDSKIYVKNGILKKILKDSREDGSLLWALLVIKSSMEQDK 602

Query: 470 KFVPL 484
            FV L
Sbjct: 603 SFVNL 607


>Z66561-1|CAA91454.1|  635|Caenorhabditis elegans Hypothetical
           protein F08G12.1 protein.
          Length = 635

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = +3

Query: 69  VASLYANGTSVSDSKLEDDLYNSILVADYDNAVE---KSKQIYEDKKSEV 209
           +  L  N + +  S  E D Y     ADYD  +E   + ++ Y DKKSE+
Sbjct: 250 IRQLETNKSEIVSSYHELDCYQETPEADYDTFIELVNQKRREYADKKSEM 299


>Z80344-2|CAB02487.3|  608|Caenorhabditis elegans Hypothetical
           protein F15D4.4 protein.
          Length = 608

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
 Frame = +1

Query: 85  PTEPQSPTPNSKTIFTTASSLPITT---MPLKKANRSTRTRRAKSSQMS*TNSYETTR 249
           PT  Q+ TP + TI TT   +P TT    PL+K N +     A  S M   N   T +
Sbjct: 94  PTSTQTTTPTTTTITTT--PVPTTTPYLSPLEKFNEAMNNDGAFKSLMDVINFNSTAK 149


>Z74030-16|CAI79165.1|  481|Caenorhabditis elegans Hypothetical
           protein D1054.9e protein.
          Length = 481

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
 Frame = +1

Query: 82  MPTEPQSPTPNSKTIFTTASSLPI----TTMPLKKANRSTRTRRAKSSQMS*TNSYETT 246
           +PTEP +   +S T  +T   LPI        + +A+ ST T  A+ S  + T +  TT
Sbjct: 235 IPTEPSTSVSSSSTSASTTPELPIIEETEEREVTEASTSTTTTTAEPSTTATTTTTTTT 293


>Z74030-15|CAI79164.1|  477|Caenorhabditis elegans Hypothetical
           protein D1054.9d protein.
          Length = 477

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
 Frame = +1

Query: 82  MPTEPQSPTPNSKTIFTTASSLPI----TTMPLKKANRSTRTRRAKSSQMS*TNSYETT 246
           +PTEP +   +S T  +T   LPI        + +A+ ST T  A+ S  + T +  TT
Sbjct: 235 IPTEPSTSVSSSSTSASTTPELPIIEETEEREVTEASTSTTTTTAEPSTTATTTTTTTT 293


>Z74030-7|CAA98447.2|  559|Caenorhabditis elegans Hypothetical
           protein D1054.9b protein.
          Length = 559

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
 Frame = +1

Query: 82  MPTEPQSPTPNSKTIFTTASSLPI----TTMPLKKANRSTRTRRAKSSQMS*TNSYETT 246
           +PTEP +   +S T  +T   LPI        + +A+ ST T  A+ S  + T +  TT
Sbjct: 235 IPTEPSTSVSSSSTSASTTPELPIIEETEEREVTEASTSTTTTTAEPSTTATTTTTTTT 293


>Z74030-6|CAA98444.2|  508|Caenorhabditis elegans Hypothetical
           protein D1054.9a protein.
          Length = 508

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
 Frame = +1

Query: 82  MPTEPQSPTPNSKTIFTTASSLPI----TTMPLKKANRSTRTRRAKSSQMS*TNSYETT 246
           +PTEP +   +S T  +T   LPI        + +A+ ST T  A+ S  + T +  TT
Sbjct: 235 IPTEPSTSVSSSSTSASTTPELPIIEETEEREVTEASTSTTTTTAEPSTTATTTTTTTT 293


>U41021-7|AAL02487.1|  680|Caenorhabditis elegans Hypothetical
           protein F14D12.1a protein.
          Length = 680

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +1

Query: 160 MPLKKANRSTRTRRAKSSQMS*TNSYETTR*THGVRLP 273
           +P + + R+   ++  SS +   NS +TTR T  VRLP
Sbjct: 585 LPKQPSQRTLTLQQQSSSSIDSLNSTQTTRTTSSVRLP 622


>U41021-6|AAL02488.1|  713|Caenorhabditis elegans Hypothetical
           protein F14D12.1b protein.
          Length = 713

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +1

Query: 160 MPLKKANRSTRTRRAKSSQMS*TNSYETTR*THGVRLP 273
           +P + + R+   ++  SS +   NS +TTR T  VRLP
Sbjct: 585 LPKQPSQRTLTLQQQSSSSIDSLNSTQTTRTTSSVRLP 622


>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
           germline protein5 protein.
          Length = 1200

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -3

Query: 502 DLVVLPQRNELPADFWTRLVLAIAVGKSAIVVAVIAQRQSKTV 374
           +L++LP    LP++  TR+      GK  +V+A      S T+
Sbjct: 781 ELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTI 823


>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
           protein MOG-5 protein.
          Length = 1200

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -3

Query: 502 DLVVLPQRNELPADFWTRLVLAIAVGKSAIVVAVIAQRQSKTV 374
           +L++LP    LP++  TR+      GK  +V+A      S T+
Sbjct: 781 ELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTI 823


>U80848-1|AAB37990.3|  389|Caenorhabditis elegans Hypothetical
           protein T10H10.3 protein.
          Length = 389

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
 Frame = +3

Query: 78  LYANGTSVSDSKLEDDLYNSILVADYDNAVEK--SKQIYE-DKKSEVITNVVNKLIRNNK 248
           +YA   S  D  LE DL+N   + +Y++ + K   +++++  KK E   NV+N+ I    
Sbjct: 318 MYAQSDSSLDHLLEWDLFNFEQLTEYEHLMMKLYKQEVFDIVKKYEKKRNVLNREIHRRD 377

Query: 249 MN 254
           ++
Sbjct: 378 VS 379


>U41026-3|AAL02447.3|  817|Caenorhabditis elegans Hypothetical
           protein C28G1.3 protein.
          Length = 817

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
 Frame = +3

Query: 15  GEPDAQKMKTVQVILCLFVASLYANGTSVSD--SKLED--DLYNSILVADYDNAVEKSKQ 182
           G PD   M  ++ ++ LF+ ++ + G +V+     L++  D YN ILV +Y    +  + 
Sbjct: 403 GSPDVLMMLKMKKVILLFILTMKSYGYAVAPLYELLQNFRDQYNEILVKEY--CAQFERD 460

Query: 183 IYEDKKSEVITN 218
           + +D  + +  N
Sbjct: 461 LEKDNYTPITVN 472


>Z81046-4|CAB02825.1|  278|Caenorhabditis elegans Hypothetical
           protein C37E2.5 protein.
          Length = 278

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +1

Query: 85  PTEPQSPTPNSKTIFTTASSLPITTMPLKKAN 180
           PT   + TP+S +  T  SSLP T+  L   N
Sbjct: 206 PTADNASTPSSSSSITATSSLPTTSSSLSVYN 237


>Z49207-3|CAA89071.1|  927|Caenorhabditis elegans Hypothetical
           protein R07E3.6 protein.
          Length = 927

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +1

Query: 94  PQSPTPNSKTIFTTAS-SLPITTMPLKKANRSTRTR 198
           PQ P P  +T  T    +LP TT+P+   N++ RT+
Sbjct: 762 PQVPLPVVQTTQTAPKPTLPPTTLPVLTTNKTPRTK 797


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,417,674
Number of Sequences: 27780
Number of extensions: 323383
Number of successful extensions: 1189
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1187
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)