Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0057
         (677 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         25   0.75 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   5.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   5.3  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   5.3  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   9.3  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   9.3  

>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
 Frame = +1

Query: 181 NSKRYQYHRQMSFLLRALQNKKPRYPRTNTSHSPKF----PTRRNT-LRPRTS 324
           N+ + QY+     L R     + R+ ++ +   PK      TRRN   RPRTS
Sbjct: 186 NTGKTQYNLNSKSLPRQYSQSRGRHNQSRSKRQPKTGREDQTRRNPYYRPRTS 238


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 318 PRAERVAASWKLRRMTRICPG 256
           P   +VAASW    M  + PG
Sbjct: 179 PEMSQVAASWHTPSMYPLSPG 199


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 318 PRAERVAASWKLRRMTRICPG 256
           P   +VAASW    M  + PG
Sbjct: 71  PEMSQVAASWHTPSMYPLSPG 91


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +3

Query: 372 TKAWSPIDRT 401
           T AWSPID T
Sbjct: 150 TYAWSPIDHT 159


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 249 EVSQDKYESFSEVSNSPQHAPPED 320
           + S    E+  ++ N P  APP D
Sbjct: 141 DCSDGSDENTCDIDNDPNRAPPCD 164


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -3

Query: 591 MIFSTSNPAQQSGVVAHLLEQRYQGV 514
           +I +TSN   Q   V HLL Q Y  V
Sbjct: 29  IIHTTSNKQLQFFAVEHLLIQCYIAV 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,076
Number of Sequences: 336
Number of extensions: 2593
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)