BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0057
(677 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537536-1|CAD97776.1| 492|Homo sapiens hypothetical protein pr... 35 0.31
BC107684-1|AAI07685.1| 387|Homo sapiens PPIL4 protein protein. 35 0.31
BC064134-1|AAH64134.1| 434|Homo sapiens PPIL4 protein protein. 35 0.31
BC020986-1|AAH20986.1| 492|Homo sapiens peptidylprolyl isomeras... 35 0.31
AL357619-2|CAI16471.1| 492|Homo sapiens peptidylprolyl isomeras... 35 0.31
AL078581-5|CAI19508.1| 492|Homo sapiens peptidylprolyl isomeras... 35 0.31
U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi... 32 2.2
M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. 32 2.2
EF127492-1|ABO33171.1| 2087|Homo sapiens Rho GTPase-activating p... 32 2.2
BC113429-1|AAI13430.1| 1738|Homo sapiens Rho GTPase-activating p... 32 2.2
BC104898-1|AAI04899.1| 1738|Homo sapiens Rho GTPase-activating p... 32 2.2
BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein. 32 2.2
AY194287-1|AAO43677.1| 1738|Homo sapiens rac GTPase activating p... 32 2.2
AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alph... 32 2.2
AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alph... 32 2.2
AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alph... 32 2.2
AB018255-1|BAA34432.2| 1770|Homo sapiens KIAA0712 protein protein. 32 2.2
BC146797-1|AAI46798.1| 754|Homo sapiens nibrin protein. 30 6.6
AY566246-1|AAS59158.1| 754|Homo sapiens Nijmegen breakage syndr... 30 6.6
AK223256-1|BAD96976.1| 754|Homo sapiens nibrin variant protein. 30 6.6
AF069291-2|AAC62232.1| 754|Homo sapiens nibrin protein. 30 6.6
AF058696-1|AAC39752.1| 754|Homo sapiens cell cycle regulatory p... 30 6.6
AF051334-1|AAC39732.1| 754|Homo sapiens nibrin protein. 30 6.6
AB013139-1|BAA28616.1| 754|Homo sapiens NBS1 protein. 30 6.6
U80458-1|AAD00355.1| 1604|Homo sapiens microtubule associated pr... 30 8.7
U38292-1|AAB41133.1| 2805|Homo sapiens microtubule-associated pr... 30 8.7
U38291-1|AAB41132.1| 2805|Homo sapiens microtubule-associated pr... 30 8.7
AF200415-1|AAF08305.2| 1825|Homo sapiens proliferation-related p... 30 8.7
AF188530-1|AAF05541.1| 764|Homo sapiens ubiquitous tetratricope... 30 8.7
>BX537536-1|CAD97776.1| 492|Homo sapiens hypothetical protein
protein.
Length = 492
Score = 34.7 bits (76), Expect = 0.31
Identities = 17/41 (41%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Frame = +2
Query: 383 VTDRPDXVDKCNQTVIDKN--PSLEIKIDANSILLDDHFDD 499
VT+ D + K N+T +DK+ P +I+I+ ++++LDD FDD
Sbjct: 129 VTEGMDIIKKINETFVDKDFVPYQDIRIN-HTVILDDPFDD 168
>BC107684-1|AAI07685.1| 387|Homo sapiens PPIL4 protein protein.
Length = 387
Score = 34.7 bits (76), Expect = 0.31
Identities = 17/41 (41%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Frame = +2
Query: 383 VTDRPDXVDKCNQTVIDKN--PSLEIKIDANSILLDDHFDD 499
VT+ D + K N+T +DK+ P +I+I+ ++++LDD FDD
Sbjct: 129 VTEGMDIIKKINETFVDKDFVPYQDIRIN-HTVILDDPFDD 168
>BC064134-1|AAH64134.1| 434|Homo sapiens PPIL4 protein protein.
Length = 434
Score = 34.7 bits (76), Expect = 0.31
Identities = 17/41 (41%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Frame = +2
Query: 383 VTDRPDXVDKCNQTVIDKN--PSLEIKIDANSILLDDHFDD 499
VT+ D + K N+T +DK+ P +I+I+ ++++LDD FDD
Sbjct: 129 VTEGMDIIKKINETFVDKDFVPYQDIRIN-HTVILDDPFDD 168
>BC020986-1|AAH20986.1| 492|Homo sapiens peptidylprolyl isomerase
(cyclophilin)-like 4 protein.
Length = 492
Score = 34.7 bits (76), Expect = 0.31
Identities = 17/41 (41%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Frame = +2
Query: 383 VTDRPDXVDKCNQTVIDKN--PSLEIKIDANSILLDDHFDD 499
VT+ D + K N+T +DK+ P +I+I+ ++++LDD FDD
Sbjct: 129 VTEGMDIIKKINETFVDKDFVPYQDIRIN-HTVILDDPFDD 168
>AL357619-2|CAI16471.1| 492|Homo sapiens peptidylprolyl isomerase
(cyclophilin)-like 4 protein.
Length = 492
Score = 34.7 bits (76), Expect = 0.31
Identities = 17/41 (41%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Frame = +2
Query: 383 VTDRPDXVDKCNQTVIDKN--PSLEIKIDANSILLDDHFDD 499
VT+ D + K N+T +DK+ P +I+I+ ++++LDD FDD
Sbjct: 129 VTEGMDIIKKINETFVDKDFVPYQDIRIN-HTVILDDPFDD 168
>AL078581-5|CAI19508.1| 492|Homo sapiens peptidylprolyl isomerase
(cyclophilin)-like 4 protein.
Length = 492
Score = 34.7 bits (76), Expect = 0.31
Identities = 17/41 (41%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Frame = +2
Query: 383 VTDRPDXVDKCNQTVIDKN--PSLEIKIDANSILLDDHFDD 499
VT+ D + K N+T +DK+ P +I+I+ ++++LDD FDD
Sbjct: 129 VTEGMDIIKKINETFVDKDFVPYQDIRIN-HTVILDDPFDD 168
>U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid
antigen 2/type XVII collagen protein.
Length = 1497
Score = 31.9 bits (69), Expect = 2.2
Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = +3
Query: 147 TGEVSAGPVRSEQQKISVPQADVVSIEGAT-EQKTEVSQDKYESFSEVSNSPQHAPPEDV 323
TG S ++ P + + + G+T E+KT V++ YE S ++SP++ E
Sbjct: 68 TGSTRGHASTSSYRRAHSPASTLPNSPGSTFERKTHVTRHAYEGSSSGNSSPEYPRKEFA 127
Query: 324 IPKIKTEVIDKPLDLKTKAWSPIDRTXWT 410
+ + +++ + S T WT
Sbjct: 128 SSSTRGRSQTRESEIRVRLQSASPSTRWT 156
>M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.
Length = 1532
Score = 31.9 bits (69), Expect = 2.2
Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = +3
Query: 147 TGEVSAGPVRSEQQKISVPQADVVSIEGAT-EQKTEVSQDKYESFSEVSNSPQHAPPEDV 323
TG S ++ P + + + G+T E+KT V++ YE S ++SP++ E
Sbjct: 103 TGSTRGHASTSSYRRAHSPASTLPNSPGSTFERKTHVTRHAYEGSSSGNSSPEYPRKEFA 162
Query: 324 IPKIKTEVIDKPLDLKTKAWSPIDRTXWT 410
+ + +++ + S T WT
Sbjct: 163 SSSTRGRSQTRESEIRVRLQSASPSTRWT 191
>EF127492-1|ABO33171.1| 2087|Homo sapiens Rho GTPase-activating
protein protein.
Length = 2087
Score = 31.9 bits (69), Expect = 2.2
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +3
Query: 141 LQTGE-VSAGPVRSEQQKISVPQADVVSIEGATEQKTEVSQDKYESFSEV-SNSPQHAPP 314
++T E V+ SE Q + A+ V + G +Q SQ K + + + + H PP
Sbjct: 959 MKTNETVAQEAYESEVQPLDQVAAEEVELPGKEDQSVSSSQSKAVASGQTQTGAVTHDPP 1018
Query: 315 EDVIPKIKTEVIDKP 359
+D +P +I P
Sbjct: 1019 QDSVPVSSVSLIPPP 1033
>BC113429-1|AAI13430.1| 1738|Homo sapiens Rho GTPase-activating
protein protein.
Length = 1738
Score = 31.9 bits (69), Expect = 2.2
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +3
Query: 141 LQTGE-VSAGPVRSEQQKISVPQADVVSIEGATEQKTEVSQDKYESFSEV-SNSPQHAPP 314
++T E V+ SE Q + A+ V + G +Q SQ K + + + + H PP
Sbjct: 610 MKTNETVAQEAYESEVQPLDQVAAEEVELPGKEDQSVSSSQSKAVASGQTQTGAVTHDPP 669
Query: 315 EDVIPKIKTEVIDKP 359
+D +P +I P
Sbjct: 670 QDSVPVSSVSLIPPP 684
>BC104898-1|AAI04899.1| 1738|Homo sapiens Rho GTPase-activating
protein protein.
Length = 1738
Score = 31.9 bits (69), Expect = 2.2
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +3
Query: 141 LQTGE-VSAGPVRSEQQKISVPQADVVSIEGATEQKTEVSQDKYESFSEV-SNSPQHAPP 314
++T E V+ SE Q + A+ V + G +Q SQ K + + + + H PP
Sbjct: 610 MKTNETVAQEAYESEVQPLDQVAAEEVELPGKEDQSVSSSQSKAVASGQTQTGAVTHDPP 669
Query: 315 EDVIPKIKTEVIDKP 359
+D +P +I P
Sbjct: 670 QDSVPVSSVSLIPPP 684
>BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein.
Length = 393
Score = 31.9 bits (69), Expect = 2.2
Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = +3
Query: 147 TGEVSAGPVRSEQQKISVPQADVVSIEGAT-EQKTEVSQDKYESFSEVSNSPQHAPPEDV 323
TG S ++ P + + + G+T E+KT V++ YE S ++SP++ E
Sbjct: 68 TGSTRGHASTSSYRRAHSPASTLPNSPGSTFERKTHVTRHAYEGSSSGNSSPEYPRKEFA 127
Query: 324 IPKIKTEVIDKPLDLKTKAWSPIDRTXWT 410
+ + +++ + S T WT
Sbjct: 128 SSSTRGRSQTRESEIRVRLQSASPSTRWT 156
>AY194287-1|AAO43677.1| 1738|Homo sapiens rac GTPase activating
protein protein.
Length = 1738
Score = 31.9 bits (69), Expect = 2.2
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +3
Query: 141 LQTGE-VSAGPVRSEQQKISVPQADVVSIEGATEQKTEVSQDKYESFSEV-SNSPQHAPP 314
++T E V+ SE Q + A+ V + G +Q SQ K + + + + H PP
Sbjct: 610 MKTNETVAQEAYESEVQPLDQVAAEEVELPGKEDQSVSSSQSKAVASGQTQTGAVTHDPP 669
Query: 315 EDVIPKIKTEVIDKP 359
+D +P +I P
Sbjct: 670 QDSVPVSSVSLIPPP 684
>AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alpha 1
protein.
Length = 417
Score = 31.9 bits (69), Expect = 2.2
Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = +3
Query: 147 TGEVSAGPVRSEQQKISVPQADVVSIEGAT-EQKTEVSQDKYESFSEVSNSPQHAPPEDV 323
TG S ++ P + + + G+T E+KT V++ YE S ++SP++ E
Sbjct: 68 TGSTRGHASTSSYRRAHSPASTLPNSPGSTFERKTHVTRHAYEGSSSGNSSPEYPRKEFA 127
Query: 324 IPKIKTEVIDKPLDLKTKAWSPIDRTXWT 410
+ + +++ + S T WT
Sbjct: 128 SSSTRGRSQTRESEIRVRLQSASPSTRWT 156
>AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1497
Score = 31.9 bits (69), Expect = 2.2
Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = +3
Query: 147 TGEVSAGPVRSEQQKISVPQADVVSIEGAT-EQKTEVSQDKYESFSEVSNSPQHAPPEDV 323
TG S ++ P + + + G+T E+KT V++ YE S ++SP++ E
Sbjct: 68 TGSTRGHASTSSYRRAHSPASTLPNSPGSTFERKTHVTRHAYEGSSSGNSSPEYPRKEFA 127
Query: 324 IPKIKTEVIDKPLDLKTKAWSPIDRTXWT 410
+ + +++ + S T WT
Sbjct: 128 SSSTRGRSQTRESEIRVRLQSASPSTRWT 156
>AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1415
Score = 31.9 bits (69), Expect = 2.2
Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = +3
Query: 147 TGEVSAGPVRSEQQKISVPQADVVSIEGAT-EQKTEVSQDKYESFSEVSNSPQHAPPEDV 323
TG S ++ P + + + G+T E+KT V++ YE S ++SP++ E
Sbjct: 68 TGSTRGHASTSSYRRAHSPASTLPNSPGSTFERKTHVTRHAYEGSSSGNSSPEYPRKEFA 127
Query: 324 IPKIKTEVIDKPLDLKTKAWSPIDRTXWT 410
+ + +++ + S T WT
Sbjct: 128 SSSTRGRSQTRESEIRVRLQSASPSTRWT 156
>AB018255-1|BAA34432.2| 1770|Homo sapiens KIAA0712 protein protein.
Length = 1770
Score = 31.9 bits (69), Expect = 2.2
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +3
Query: 141 LQTGE-VSAGPVRSEQQKISVPQADVVSIEGATEQKTEVSQDKYESFSEV-SNSPQHAPP 314
++T E V+ SE Q + A+ V + G +Q SQ K + + + + H PP
Sbjct: 642 MKTNETVAQEAYESEVQPLDQVAAEEVELPGKEDQSVSSSQSKAVASGQTQTGAVTHDPP 701
Query: 315 EDVIPKIKTEVIDKP 359
+D +P +I P
Sbjct: 702 QDSVPVSSVSLIPPP 716
>BC146797-1|AAI46798.1| 754|Homo sapiens nibrin protein.
Length = 754
Score = 30.3 bits (65), Expect = 6.6
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 195 SVPQADVVSIEGATEQKTEVSQDKYESFSEVSNSPQHAPPEDVIPK 332
+VP++ +S E +K E+ +D S E+SN+ + +++PK
Sbjct: 607 AVPESSKISQENEIGKKRELKEDSLWSAKEISNNDKLQDDSEMLPK 652
>AY566246-1|AAS59158.1| 754|Homo sapiens Nijmegen breakage syndrome
1 (nibrin) protein.
Length = 754
Score = 30.3 bits (65), Expect = 6.6
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 195 SVPQADVVSIEGATEQKTEVSQDKYESFSEVSNSPQHAPPEDVIPK 332
+VP++ +S E +K E+ +D S E+SN+ + +++PK
Sbjct: 607 AVPESSKISQENEIGKKRELKEDSLWSAKEISNNDKLQDDSEMLPK 652
>AK223256-1|BAD96976.1| 754|Homo sapiens nibrin variant protein.
Length = 754
Score = 30.3 bits (65), Expect = 6.6
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 195 SVPQADVVSIEGATEQKTEVSQDKYESFSEVSNSPQHAPPEDVIPK 332
+VP++ +S E +K E+ +D S E+SN+ + +++PK
Sbjct: 607 AVPESSKISQENEIGKKRELKEDSLWSAKEISNNDKLQDDSEMLPK 652
>AF069291-2|AAC62232.1| 754|Homo sapiens nibrin protein.
Length = 754
Score = 30.3 bits (65), Expect = 6.6
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 195 SVPQADVVSIEGATEQKTEVSQDKYESFSEVSNSPQHAPPEDVIPK 332
+VP++ +S E +K E+ +D S E+SN+ + +++PK
Sbjct: 607 AVPESSKISQENEIGKKRELKEDSLWSAKEISNNDKLQDDSEMLPK 652
>AF058696-1|AAC39752.1| 754|Homo sapiens cell cycle regulatory
protein p95 protein.
Length = 754
Score = 30.3 bits (65), Expect = 6.6
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 195 SVPQADVVSIEGATEQKTEVSQDKYESFSEVSNSPQHAPPEDVIPK 332
+VP++ +S E +K E+ +D S E+SN+ + +++PK
Sbjct: 607 AVPESSKISQENEIGKKRELKEDSLWSAKEISNNDKLQDDSEMLPK 652
>AF051334-1|AAC39732.1| 754|Homo sapiens nibrin protein.
Length = 754
Score = 30.3 bits (65), Expect = 6.6
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 195 SVPQADVVSIEGATEQKTEVSQDKYESFSEVSNSPQHAPPEDVIPK 332
+VP++ +S E +K E+ +D S E+SN+ + +++PK
Sbjct: 607 AVPESSKISQENEIGKKRELKEDSLWSAKEISNNDKLQDDSEMLPK 652
>AB013139-1|BAA28616.1| 754|Homo sapiens NBS1 protein.
Length = 754
Score = 30.3 bits (65), Expect = 6.6
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 195 SVPQADVVSIEGATEQKTEVSQDKYESFSEVSNSPQHAPPEDVIPK 332
+VP++ +S E +K E+ +D S E+SN+ + +++PK
Sbjct: 607 AVPESSKISQENEIGKKRELKEDSLWSAKEISNNDKLQDDSEMLPK 652
>U80458-1|AAD00355.1| 1604|Homo sapiens microtubule associated protein
1A protein.
Length = 1604
Score = 29.9 bits (64), Expect = 8.7
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +3
Query: 210 DVVSIEGATEQKTEVSQDKYESFSEVSNSPQHAPPEDVIPKIK---TEVIDKPLDLKTKA 380
D+ + EQK ++ ++K ++ + S +H PED + ++K E DK + K +A
Sbjct: 1394 DLEQKDRVLEQKEKIPEEKDKALDQKVRSVEHKAPEDTVAEMKDRDLEQTDKAPEQKHQA 1453
Query: 381 WSPIDR 398
D+
Sbjct: 1454 QEQKDK 1459
>U38292-1|AAB41133.1| 2805|Homo sapiens microtubule-associated protein
1a protein.
Length = 2805
Score = 29.9 bits (64), Expect = 8.7
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +3
Query: 210 DVVSIEGATEQKTEVSQDKYESFSEVSNSPQHAPPEDVIPKIK---TEVIDKPLDLKTKA 380
D+ + EQK ++ ++K ++ + S +H PED + ++K E DK + K +A
Sbjct: 1477 DLEQKDRVLEQKEKIPEEKDKALDQKVRSVEHKAPEDTVAEMKDRDLEQTDKAPEQKHQA 1536
Query: 381 WSPIDR 398
D+
Sbjct: 1537 QEQKDK 1542
>U38291-1|AAB41132.1| 2805|Homo sapiens microtubule-associated protein
1a protein.
Length = 2805
Score = 29.9 bits (64), Expect = 8.7
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +3
Query: 210 DVVSIEGATEQKTEVSQDKYESFSEVSNSPQHAPPEDVIPKIK---TEVIDKPLDLKTKA 380
D+ + EQK ++ ++K ++ + S +H PED + ++K E DK + K +A
Sbjct: 1477 DLEQKDRVLEQKEKIPEEKDKALDQKVRSVEHKAPEDTVAEMKDRDLEQTDKAPEQKHQA 1536
Query: 381 WSPIDR 398
D+
Sbjct: 1537 QEQKDK 1542
>AF200415-1|AAF08305.2| 1825|Homo sapiens proliferation-related
protein P80 protein.
Length = 1825
Score = 29.9 bits (64), Expect = 8.7
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +3
Query: 210 DVVSIEGATEQKTEVSQDKYESFSEVSNSPQHAPPEDVIPKIK---TEVIDKPLDLKTKA 380
D+ + EQK ++ ++K ++ + S +H PED + ++K E DK + K +A
Sbjct: 1477 DLEQKDRVLEQKEKIPEEKDKALDQKVRSVEHKAPEDTVAEMKDRDLEQTDKAPEQKHQA 1536
Query: 381 WSPIDR 398
D+
Sbjct: 1537 QEQKDK 1542
>AF188530-1|AAF05541.1| 764|Homo sapiens ubiquitous
tetratricopeptide containing protein RoXaN protein.
Length = 764
Score = 29.9 bits (64), Expect = 8.7
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 246 TEVSQDKYESFSEVSNSPQHAPP 314
T VS DK +SF E +NS H PP
Sbjct: 368 TRVSLDKPDSFMEETNSQDHRPP 390
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,684,981
Number of Sequences: 237096
Number of extensions: 1480542
Number of successful extensions: 4776
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 4521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4774
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -