BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0057 (677 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BX537536-1|CAD97776.1| 492|Homo sapiens hypothetical protein pr... 35 0.31 BC107684-1|AAI07685.1| 387|Homo sapiens PPIL4 protein protein. 35 0.31 BC064134-1|AAH64134.1| 434|Homo sapiens PPIL4 protein protein. 35 0.31 BC020986-1|AAH20986.1| 492|Homo sapiens peptidylprolyl isomeras... 35 0.31 AL357619-2|CAI16471.1| 492|Homo sapiens peptidylprolyl isomeras... 35 0.31 AL078581-5|CAI19508.1| 492|Homo sapiens peptidylprolyl isomeras... 35 0.31 U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi... 32 2.2 M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. 32 2.2 EF127492-1|ABO33171.1| 2087|Homo sapiens Rho GTPase-activating p... 32 2.2 BC113429-1|AAI13430.1| 1738|Homo sapiens Rho GTPase-activating p... 32 2.2 BC104898-1|AAI04899.1| 1738|Homo sapiens Rho GTPase-activating p... 32 2.2 BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein. 32 2.2 AY194287-1|AAO43677.1| 1738|Homo sapiens rac GTPase activating p... 32 2.2 AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alph... 32 2.2 AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alph... 32 2.2 AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alph... 32 2.2 AB018255-1|BAA34432.2| 1770|Homo sapiens KIAA0712 protein protein. 32 2.2 BC146797-1|AAI46798.1| 754|Homo sapiens nibrin protein. 30 6.6 AY566246-1|AAS59158.1| 754|Homo sapiens Nijmegen breakage syndr... 30 6.6 AK223256-1|BAD96976.1| 754|Homo sapiens nibrin variant protein. 30 6.6 AF069291-2|AAC62232.1| 754|Homo sapiens nibrin protein. 30 6.6 AF058696-1|AAC39752.1| 754|Homo sapiens cell cycle regulatory p... 30 6.6 AF051334-1|AAC39732.1| 754|Homo sapiens nibrin protein. 30 6.6 AB013139-1|BAA28616.1| 754|Homo sapiens NBS1 protein. 30 6.6 U80458-1|AAD00355.1| 1604|Homo sapiens microtubule associated pr... 30 8.7 U38292-1|AAB41133.1| 2805|Homo sapiens microtubule-associated pr... 30 8.7 U38291-1|AAB41132.1| 2805|Homo sapiens microtubule-associated pr... 30 8.7 AF200415-1|AAF08305.2| 1825|Homo sapiens proliferation-related p... 30 8.7 AF188530-1|AAF05541.1| 764|Homo sapiens ubiquitous tetratricope... 30 8.7 >BX537536-1|CAD97776.1| 492|Homo sapiens hypothetical protein protein. Length = 492 Score = 34.7 bits (76), Expect = 0.31 Identities = 17/41 (41%), Positives = 29/41 (70%), Gaps = 2/41 (4%) Frame = +2 Query: 383 VTDRPDXVDKCNQTVIDKN--PSLEIKIDANSILLDDHFDD 499 VT+ D + K N+T +DK+ P +I+I+ ++++LDD FDD Sbjct: 129 VTEGMDIIKKINETFVDKDFVPYQDIRIN-HTVILDDPFDD 168 >BC107684-1|AAI07685.1| 387|Homo sapiens PPIL4 protein protein. Length = 387 Score = 34.7 bits (76), Expect = 0.31 Identities = 17/41 (41%), Positives = 29/41 (70%), Gaps = 2/41 (4%) Frame = +2 Query: 383 VTDRPDXVDKCNQTVIDKN--PSLEIKIDANSILLDDHFDD 499 VT+ D + K N+T +DK+ P +I+I+ ++++LDD FDD Sbjct: 129 VTEGMDIIKKINETFVDKDFVPYQDIRIN-HTVILDDPFDD 168 >BC064134-1|AAH64134.1| 434|Homo sapiens PPIL4 protein protein. Length = 434 Score = 34.7 bits (76), Expect = 0.31 Identities = 17/41 (41%), Positives = 29/41 (70%), Gaps = 2/41 (4%) Frame = +2 Query: 383 VTDRPDXVDKCNQTVIDKN--PSLEIKIDANSILLDDHFDD 499 VT+ D + K N+T +DK+ P +I+I+ ++++LDD FDD Sbjct: 129 VTEGMDIIKKINETFVDKDFVPYQDIRIN-HTVILDDPFDD 168 >BC020986-1|AAH20986.1| 492|Homo sapiens peptidylprolyl isomerase (cyclophilin)-like 4 protein. Length = 492 Score = 34.7 bits (76), Expect = 0.31 Identities = 17/41 (41%), Positives = 29/41 (70%), Gaps = 2/41 (4%) Frame = +2 Query: 383 VTDRPDXVDKCNQTVIDKN--PSLEIKIDANSILLDDHFDD 499 VT+ D + K N+T +DK+ P +I+I+ ++++LDD FDD Sbjct: 129 VTEGMDIIKKINETFVDKDFVPYQDIRIN-HTVILDDPFDD 168 >AL357619-2|CAI16471.1| 492|Homo sapiens peptidylprolyl isomerase (cyclophilin)-like 4 protein. Length = 492 Score = 34.7 bits (76), Expect = 0.31 Identities = 17/41 (41%), Positives = 29/41 (70%), Gaps = 2/41 (4%) Frame = +2 Query: 383 VTDRPDXVDKCNQTVIDKN--PSLEIKIDANSILLDDHFDD 499 VT+ D + K N+T +DK+ P +I+I+ ++++LDD FDD Sbjct: 129 VTEGMDIIKKINETFVDKDFVPYQDIRIN-HTVILDDPFDD 168 >AL078581-5|CAI19508.1| 492|Homo sapiens peptidylprolyl isomerase (cyclophilin)-like 4 protein. Length = 492 Score = 34.7 bits (76), Expect = 0.31 Identities = 17/41 (41%), Positives = 29/41 (70%), Gaps = 2/41 (4%) Frame = +2 Query: 383 VTDRPDXVDKCNQTVIDKN--PSLEIKIDANSILLDDHFDD 499 VT+ D + K N+T +DK+ P +I+I+ ++++LDD FDD Sbjct: 129 VTEGMDIIKKINETFVDKDFVPYQDIRIN-HTVILDDPFDD 168 >U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid antigen 2/type XVII collagen protein. Length = 1497 Score = 31.9 bits (69), Expect = 2.2 Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 1/89 (1%) Frame = +3 Query: 147 TGEVSAGPVRSEQQKISVPQADVVSIEGAT-EQKTEVSQDKYESFSEVSNSPQHAPPEDV 323 TG S ++ P + + + G+T E+KT V++ YE S ++SP++ E Sbjct: 68 TGSTRGHASTSSYRRAHSPASTLPNSPGSTFERKTHVTRHAYEGSSSGNSSPEYPRKEFA 127 Query: 324 IPKIKTEVIDKPLDLKTKAWSPIDRTXWT 410 + + +++ + S T WT Sbjct: 128 SSSTRGRSQTRESEIRVRLQSASPSTRWT 156 >M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. Length = 1532 Score = 31.9 bits (69), Expect = 2.2 Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 1/89 (1%) Frame = +3 Query: 147 TGEVSAGPVRSEQQKISVPQADVVSIEGAT-EQKTEVSQDKYESFSEVSNSPQHAPPEDV 323 TG S ++ P + + + G+T E+KT V++ YE S ++SP++ E Sbjct: 103 TGSTRGHASTSSYRRAHSPASTLPNSPGSTFERKTHVTRHAYEGSSSGNSSPEYPRKEFA 162 Query: 324 IPKIKTEVIDKPLDLKTKAWSPIDRTXWT 410 + + +++ + S T WT Sbjct: 163 SSSTRGRSQTRESEIRVRLQSASPSTRWT 191 >EF127492-1|ABO33171.1| 2087|Homo sapiens Rho GTPase-activating protein protein. Length = 2087 Score = 31.9 bits (69), Expect = 2.2 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%) Frame = +3 Query: 141 LQTGE-VSAGPVRSEQQKISVPQADVVSIEGATEQKTEVSQDKYESFSEV-SNSPQHAPP 314 ++T E V+ SE Q + A+ V + G +Q SQ K + + + + H PP Sbjct: 959 MKTNETVAQEAYESEVQPLDQVAAEEVELPGKEDQSVSSSQSKAVASGQTQTGAVTHDPP 1018 Query: 315 EDVIPKIKTEVIDKP 359 +D +P +I P Sbjct: 1019 QDSVPVSSVSLIPPP 1033 >BC113429-1|AAI13430.1| 1738|Homo sapiens Rho GTPase-activating protein protein. Length = 1738 Score = 31.9 bits (69), Expect = 2.2 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%) Frame = +3 Query: 141 LQTGE-VSAGPVRSEQQKISVPQADVVSIEGATEQKTEVSQDKYESFSEV-SNSPQHAPP 314 ++T E V+ SE Q + A+ V + G +Q SQ K + + + + H PP Sbjct: 610 MKTNETVAQEAYESEVQPLDQVAAEEVELPGKEDQSVSSSQSKAVASGQTQTGAVTHDPP 669 Query: 315 EDVIPKIKTEVIDKP 359 +D +P +I P Sbjct: 670 QDSVPVSSVSLIPPP 684 >BC104898-1|AAI04899.1| 1738|Homo sapiens Rho GTPase-activating protein protein. Length = 1738 Score = 31.9 bits (69), Expect = 2.2 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%) Frame = +3 Query: 141 LQTGE-VSAGPVRSEQQKISVPQADVVSIEGATEQKTEVSQDKYESFSEV-SNSPQHAPP 314 ++T E V+ SE Q + A+ V + G +Q SQ K + + + + H PP Sbjct: 610 MKTNETVAQEAYESEVQPLDQVAAEEVELPGKEDQSVSSSQSKAVASGQTQTGAVTHDPP 669 Query: 315 EDVIPKIKTEVIDKP 359 +D +P +I P Sbjct: 670 QDSVPVSSVSLIPPP 684 >BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein. Length = 393 Score = 31.9 bits (69), Expect = 2.2 Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 1/89 (1%) Frame = +3 Query: 147 TGEVSAGPVRSEQQKISVPQADVVSIEGAT-EQKTEVSQDKYESFSEVSNSPQHAPPEDV 323 TG S ++ P + + + G+T E+KT V++ YE S ++SP++ E Sbjct: 68 TGSTRGHASTSSYRRAHSPASTLPNSPGSTFERKTHVTRHAYEGSSSGNSSPEYPRKEFA 127 Query: 324 IPKIKTEVIDKPLDLKTKAWSPIDRTXWT 410 + + +++ + S T WT Sbjct: 128 SSSTRGRSQTRESEIRVRLQSASPSTRWT 156 >AY194287-1|AAO43677.1| 1738|Homo sapiens rac GTPase activating protein protein. Length = 1738 Score = 31.9 bits (69), Expect = 2.2 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%) Frame = +3 Query: 141 LQTGE-VSAGPVRSEQQKISVPQADVVSIEGATEQKTEVSQDKYESFSEV-SNSPQHAPP 314 ++T E V+ SE Q + A+ V + G +Q SQ K + + + + H PP Sbjct: 610 MKTNETVAQEAYESEVQPLDQVAAEEVELPGKEDQSVSSSQSKAVASGQTQTGAVTHDPP 669 Query: 315 EDVIPKIKTEVIDKP 359 +D +P +I P Sbjct: 670 QDSVPVSSVSLIPPP 684 >AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alpha 1 protein. Length = 417 Score = 31.9 bits (69), Expect = 2.2 Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 1/89 (1%) Frame = +3 Query: 147 TGEVSAGPVRSEQQKISVPQADVVSIEGAT-EQKTEVSQDKYESFSEVSNSPQHAPPEDV 323 TG S ++ P + + + G+T E+KT V++ YE S ++SP++ E Sbjct: 68 TGSTRGHASTSSYRRAHSPASTLPNSPGSTFERKTHVTRHAYEGSSSGNSSPEYPRKEFA 127 Query: 324 IPKIKTEVIDKPLDLKTKAWSPIDRTXWT 410 + + +++ + S T WT Sbjct: 128 SSSTRGRSQTRESEIRVRLQSASPSTRWT 156 >AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alpha 1 protein. Length = 1497 Score = 31.9 bits (69), Expect = 2.2 Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 1/89 (1%) Frame = +3 Query: 147 TGEVSAGPVRSEQQKISVPQADVVSIEGAT-EQKTEVSQDKYESFSEVSNSPQHAPPEDV 323 TG S ++ P + + + G+T E+KT V++ YE S ++SP++ E Sbjct: 68 TGSTRGHASTSSYRRAHSPASTLPNSPGSTFERKTHVTRHAYEGSSSGNSSPEYPRKEFA 127 Query: 324 IPKIKTEVIDKPLDLKTKAWSPIDRTXWT 410 + + +++ + S T WT Sbjct: 128 SSSTRGRSQTRESEIRVRLQSASPSTRWT 156 >AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alpha 1 protein. Length = 1415 Score = 31.9 bits (69), Expect = 2.2 Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 1/89 (1%) Frame = +3 Query: 147 TGEVSAGPVRSEQQKISVPQADVVSIEGAT-EQKTEVSQDKYESFSEVSNSPQHAPPEDV 323 TG S ++ P + + + G+T E+KT V++ YE S ++SP++ E Sbjct: 68 TGSTRGHASTSSYRRAHSPASTLPNSPGSTFERKTHVTRHAYEGSSSGNSSPEYPRKEFA 127 Query: 324 IPKIKTEVIDKPLDLKTKAWSPIDRTXWT 410 + + +++ + S T WT Sbjct: 128 SSSTRGRSQTRESEIRVRLQSASPSTRWT 156 >AB018255-1|BAA34432.2| 1770|Homo sapiens KIAA0712 protein protein. Length = 1770 Score = 31.9 bits (69), Expect = 2.2 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 2/75 (2%) Frame = +3 Query: 141 LQTGE-VSAGPVRSEQQKISVPQADVVSIEGATEQKTEVSQDKYESFSEV-SNSPQHAPP 314 ++T E V+ SE Q + A+ V + G +Q SQ K + + + + H PP Sbjct: 642 MKTNETVAQEAYESEVQPLDQVAAEEVELPGKEDQSVSSSQSKAVASGQTQTGAVTHDPP 701 Query: 315 EDVIPKIKTEVIDKP 359 +D +P +I P Sbjct: 702 QDSVPVSSVSLIPPP 716 >BC146797-1|AAI46798.1| 754|Homo sapiens nibrin protein. Length = 754 Score = 30.3 bits (65), Expect = 6.6 Identities = 13/46 (28%), Positives = 26/46 (56%) Frame = +3 Query: 195 SVPQADVVSIEGATEQKTEVSQDKYESFSEVSNSPQHAPPEDVIPK 332 +VP++ +S E +K E+ +D S E+SN+ + +++PK Sbjct: 607 AVPESSKISQENEIGKKRELKEDSLWSAKEISNNDKLQDDSEMLPK 652 >AY566246-1|AAS59158.1| 754|Homo sapiens Nijmegen breakage syndrome 1 (nibrin) protein. Length = 754 Score = 30.3 bits (65), Expect = 6.6 Identities = 13/46 (28%), Positives = 26/46 (56%) Frame = +3 Query: 195 SVPQADVVSIEGATEQKTEVSQDKYESFSEVSNSPQHAPPEDVIPK 332 +VP++ +S E +K E+ +D S E+SN+ + +++PK Sbjct: 607 AVPESSKISQENEIGKKRELKEDSLWSAKEISNNDKLQDDSEMLPK 652 >AK223256-1|BAD96976.1| 754|Homo sapiens nibrin variant protein. Length = 754 Score = 30.3 bits (65), Expect = 6.6 Identities = 13/46 (28%), Positives = 26/46 (56%) Frame = +3 Query: 195 SVPQADVVSIEGATEQKTEVSQDKYESFSEVSNSPQHAPPEDVIPK 332 +VP++ +S E +K E+ +D S E+SN+ + +++PK Sbjct: 607 AVPESSKISQENEIGKKRELKEDSLWSAKEISNNDKLQDDSEMLPK 652 >AF069291-2|AAC62232.1| 754|Homo sapiens nibrin protein. Length = 754 Score = 30.3 bits (65), Expect = 6.6 Identities = 13/46 (28%), Positives = 26/46 (56%) Frame = +3 Query: 195 SVPQADVVSIEGATEQKTEVSQDKYESFSEVSNSPQHAPPEDVIPK 332 +VP++ +S E +K E+ +D S E+SN+ + +++PK Sbjct: 607 AVPESSKISQENEIGKKRELKEDSLWSAKEISNNDKLQDDSEMLPK 652 >AF058696-1|AAC39752.1| 754|Homo sapiens cell cycle regulatory protein p95 protein. Length = 754 Score = 30.3 bits (65), Expect = 6.6 Identities = 13/46 (28%), Positives = 26/46 (56%) Frame = +3 Query: 195 SVPQADVVSIEGATEQKTEVSQDKYESFSEVSNSPQHAPPEDVIPK 332 +VP++ +S E +K E+ +D S E+SN+ + +++PK Sbjct: 607 AVPESSKISQENEIGKKRELKEDSLWSAKEISNNDKLQDDSEMLPK 652 >AF051334-1|AAC39732.1| 754|Homo sapiens nibrin protein. Length = 754 Score = 30.3 bits (65), Expect = 6.6 Identities = 13/46 (28%), Positives = 26/46 (56%) Frame = +3 Query: 195 SVPQADVVSIEGATEQKTEVSQDKYESFSEVSNSPQHAPPEDVIPK 332 +VP++ +S E +K E+ +D S E+SN+ + +++PK Sbjct: 607 AVPESSKISQENEIGKKRELKEDSLWSAKEISNNDKLQDDSEMLPK 652 >AB013139-1|BAA28616.1| 754|Homo sapiens NBS1 protein. Length = 754 Score = 30.3 bits (65), Expect = 6.6 Identities = 13/46 (28%), Positives = 26/46 (56%) Frame = +3 Query: 195 SVPQADVVSIEGATEQKTEVSQDKYESFSEVSNSPQHAPPEDVIPK 332 +VP++ +S E +K E+ +D S E+SN+ + +++PK Sbjct: 607 AVPESSKISQENEIGKKRELKEDSLWSAKEISNNDKLQDDSEMLPK 652 >U80458-1|AAD00355.1| 1604|Homo sapiens microtubule associated protein 1A protein. Length = 1604 Score = 29.9 bits (64), Expect = 8.7 Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Frame = +3 Query: 210 DVVSIEGATEQKTEVSQDKYESFSEVSNSPQHAPPEDVIPKIK---TEVIDKPLDLKTKA 380 D+ + EQK ++ ++K ++ + S +H PED + ++K E DK + K +A Sbjct: 1394 DLEQKDRVLEQKEKIPEEKDKALDQKVRSVEHKAPEDTVAEMKDRDLEQTDKAPEQKHQA 1453 Query: 381 WSPIDR 398 D+ Sbjct: 1454 QEQKDK 1459 >U38292-1|AAB41133.1| 2805|Homo sapiens microtubule-associated protein 1a protein. Length = 2805 Score = 29.9 bits (64), Expect = 8.7 Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Frame = +3 Query: 210 DVVSIEGATEQKTEVSQDKYESFSEVSNSPQHAPPEDVIPKIK---TEVIDKPLDLKTKA 380 D+ + EQK ++ ++K ++ + S +H PED + ++K E DK + K +A Sbjct: 1477 DLEQKDRVLEQKEKIPEEKDKALDQKVRSVEHKAPEDTVAEMKDRDLEQTDKAPEQKHQA 1536 Query: 381 WSPIDR 398 D+ Sbjct: 1537 QEQKDK 1542 >U38291-1|AAB41132.1| 2805|Homo sapiens microtubule-associated protein 1a protein. Length = 2805 Score = 29.9 bits (64), Expect = 8.7 Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Frame = +3 Query: 210 DVVSIEGATEQKTEVSQDKYESFSEVSNSPQHAPPEDVIPKIK---TEVIDKPLDLKTKA 380 D+ + EQK ++ ++K ++ + S +H PED + ++K E DK + K +A Sbjct: 1477 DLEQKDRVLEQKEKIPEEKDKALDQKVRSVEHKAPEDTVAEMKDRDLEQTDKAPEQKHQA 1536 Query: 381 WSPIDR 398 D+ Sbjct: 1537 QEQKDK 1542 >AF200415-1|AAF08305.2| 1825|Homo sapiens proliferation-related protein P80 protein. Length = 1825 Score = 29.9 bits (64), Expect = 8.7 Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Frame = +3 Query: 210 DVVSIEGATEQKTEVSQDKYESFSEVSNSPQHAPPEDVIPKIK---TEVIDKPLDLKTKA 380 D+ + EQK ++ ++K ++ + S +H PED + ++K E DK + K +A Sbjct: 1477 DLEQKDRVLEQKEKIPEEKDKALDQKVRSVEHKAPEDTVAEMKDRDLEQTDKAPEQKHQA 1536 Query: 381 WSPIDR 398 D+ Sbjct: 1537 QEQKDK 1542 >AF188530-1|AAF05541.1| 764|Homo sapiens ubiquitous tetratricopeptide containing protein RoXaN protein. Length = 764 Score = 29.9 bits (64), Expect = 8.7 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = +3 Query: 246 TEVSQDKYESFSEVSNSPQHAPP 314 T VS DK +SF E +NS H PP Sbjct: 368 TRVSLDKPDSFMEETNSQDHRPP 390 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 81,684,981 Number of Sequences: 237096 Number of extensions: 1480542 Number of successful extensions: 4776 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 4521 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4774 length of database: 76,859,062 effective HSP length: 88 effective length of database: 55,994,614 effective search space used: 7671262118 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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