Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0057
(677 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g00930.1 68417.m00126 COP1-interacting protein 4.1 (CIP4.1) i... 33 0.23
At5g43230.1 68418.m05283 hypothetical protein 32 0.40
At5g02390.1 68418.m00162 expressed protein ; expression supporte... 30 1.6
At5g06700.1 68418.m00757 expressed protein strong similarity to ... 29 2.1
At3g44910.1 68416.m04838 cation/hydrogen exchanger, putative (CH... 29 2.1
At4g03450.1 68417.m00472 ankyrin repeat family protein contains ... 29 2.8
At3g48190.1 68416.m05257 ataxia-telangiectasia mutated protein (... 29 2.8
At1g19870.1 68414.m02492 calmodulin-binding family protein conta... 29 2.8
At4g39745.1 68417.m05627 hydroxyproline-rich glycoprotein family... 29 3.7
At3g13750.1 68416.m01735 beta-galactosidase, putative / lactase,... 28 4.9
At1g61080.1 68414.m06877 proline-rich family protein 28 4.9
At4g33230.1 68417.m04730 pectinesterase family protein contains ... 28 6.5
At4g15180.1 68417.m02328 SET domain-containing protein contains ... 28 6.5
At4g04130.1 68417.m00583 Ulp1 protease family protein contains P... 28 6.5
At3g51540.1 68416.m05644 expressed protein mucin 5AC, Homo sapie... 28 6.5
At2g39560.1 68415.m04853 expressed protein 28 6.5
At5g59660.1 68418.m07480 leucine-rich repeat protein kinase, put... 27 8.6
At5g39050.1 68418.m04725 transferase family protein similar to a... 27 8.6
At4g36240.1 68417.m05155 zinc finger (GATA type) family protein ... 27 8.6
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 27 8.6
At4g15840.1 68417.m02409 expressed protein 27 8.6
At2g30580.1 68415.m03726 zinc finger (C3HC4-type RING finger) fa... 27 8.6
At1g63750.1 68414.m07214 disease resistance protein (TIR-NBS-LRR... 27 8.6
>At4g00930.1 68417.m00126 COP1-interacting protein 4.1 (CIP4.1)
identical to cDNA CIP4.1 mRNA for COP1-interacting
protein 4.1, GI:13160649
Length = 976
Score = 32.7 bits (71), Expect = 0.23
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +3
Query: 123 GLVHEDLQTGEVSAGPVRSEQQKISVPQADVVSIEGATEQKTEVSQDKYESFSEVSN 293
G + +DL+TGE++A V +Q+K S P +++V + T Q E + + + S + N
Sbjct: 195 GAIEQDLETGEITADIVMIDQEKGSTPVSELVDGQ-ITSQDDERGEGRRLAPSALDN 250
>At5g43230.1 68418.m05283 hypothetical protein
Length = 628
Score = 31.9 bits (69), Expect = 0.40
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +3
Query: 171 VRSEQQKISVPQADVVSIEGATEQKTEVSQDKYES-FSEVSNSPQHAPPEDVIPKIKTEV 347
+R E++K Q +VS E +QK + + K + FSE+ + P PP+ ++K
Sbjct: 32 LREEERKRQSNQPVIVSAEIDQKQKEDTNAFKLKKQFSEIKSGPLSLPPDAAKKQMKLRT 91
Query: 348 IDKPLDLKTKAWSPIDR 398
L KT I R
Sbjct: 92 NTLALGRKTLGMEGIPR 108
>At5g02390.1 68418.m00162 expressed protein ; expression supported
by MPSS
Length = 835
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3
Query: 192 ISVPQAD--VVSIEGATEQKTEVSQDKYESFSEVSNSPQHAPPEDVIPKIKTEVIDKPLD 365
+S+PQ + I+ T Q E QD ++ SE+S + + + + D P+D
Sbjct: 530 LSLPQMKFHALKIDDLTVQSIEEEQDGLDNISEISEDHSQSSEHETLDQTMDASEDSPVD 589
Query: 366 LKTK 377
+T+
Sbjct: 590 AETE 593
>At5g06700.1 68418.m00757 expressed protein strong similarity to
unknown protein (emb|CAB82953.1)
Length = 608
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2
Query: 328 GMTSSGGACCGELETSENDSYLS 260
G +SGGAC E E +ND+YL+
Sbjct: 493 GQWNSGGACDSETEPIKNDTYLT 515
>At3g44910.1 68416.m04838 cation/hydrogen exchanger, putative
(CHX12) monovalent cation:proton antiporter family 2
(CPA2) member, PMID:11500563
Length = 705
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +3
Query: 99 SETMALYPGLVHEDLQTGEVSAGPVRSEQQKISVPQADVVSIEGATEQKTEVSQDKYES 275
S TM ++ + HE+L E+ + I VP +++GA E + E + ES
Sbjct: 473 SVTMTMFTAITHENLMHDEICKVALEQATSIIIVPSGRKWTVDGAFESEDEAIRRLNES 531
>At4g03450.1 68417.m00472 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 641
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/53 (24%), Positives = 33/53 (62%)
Frame = -2
Query: 391 IGDXALVFRSSGLSMTSVLILGMTSSGGACCGELETSENDSYLSWDTSVFCSV 233
+GD LV ++ L++ ++ + ++ S CG + T++++ +L +D+ +F S+
Sbjct: 529 LGDPVLVHKTFHLALPALFVSLVSMSSAFFCGVVATTKHNPWL-FDSIIFISI 580
>At3g48190.1 68416.m05257 ataxia-telangiectasia mutated protein (Atm)
identical to ataxia-telangiectasia mutated protein (Atm)
[Arabidopsis thaliana] GI:7529272; contains Pfam profile
PF00855: PWWP domain; contains GA donor splice site at
exon 73
Length = 3255
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 94 EVQKRWRSIRDSYTKTYRQGKCLPDQCAPNSKRYQYHRQMSFLLRALQ 237
+ + WR+ + ++ Y Q C P Q A N+ YH + LRALQ
Sbjct: 2903 QYEAAWRAGKWDFSLLYPQTHCQPLQHAKNN---NYHESLHCCLRALQ 2947
>At1g19870.1 68414.m02492 calmodulin-binding family protein contains
Pfam profile: PF00612 IQ calmodulin-binding motif
Length = 794
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 180 EQQKISV-PQADVVSIEGATEQKTEVSQDKYES 275
E Q + + PQAD V+ + E KTE YE+
Sbjct: 362 ETQNVKISPQADFVNSDSTVENKTETDMPSYEA 394
>At4g39745.1 68417.m05627 hydroxyproline-rich glycoprotein family
protein
Length = 253
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 294 SPQHAPPEDVIPKIKTEVIDKPLD 365
SP PP D IP+I+T V+ P D
Sbjct: 67 SPSSPPPPDPIPEIETYVVHVPRD 90
>At3g13750.1 68416.m01735 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase precursor
SP:P48980 from [Lycopersicon esculentum]
Length = 847
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 127 SYTKTYRQGKCLPDQCAPNSKRYQYHRQMSFL 222
SYT T+R+ KCL + C S+R+ YH S+L
Sbjct: 678 SYTGTFREDKCLRN-CGEASQRW-YHVPRSWL 707
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 213 VVSIEGATEQKTEVSQDKYESFSEVSNSPQHAPPEDVIPKIKTEVIDKP 359
+ S+E +E K S+ KYE+ S++ P PP + IKT + P
Sbjct: 391 ISSLESTSESKLNHSE-KYENSSQLFPPPPPPPPPPPLSFIKTASLPLP 438
>At4g33230.1 68417.m04730 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 609
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = +3
Query: 216 VSIEGATEQKTEVSQDKYESFSEVSNSPQHAPPEDVIPKIKTEVIDKPLD--LKTKAWSP 389
V+ E T+++ + + +K + S SP PP +K +DK + + + P
Sbjct: 47 VTYENKTQEQGKTTNNKSKDSPTKSESPSPKPPSSAAQTVKAGQVDKIIQTLCNSTLYKP 106
Query: 390 IDRTXWTNATK 422
+ N TK
Sbjct: 107 TCQNTLKNETK 117
>At4g15180.1 68417.m02328 SET domain-containing protein contains
Pfam profile PF00856: SET domain
Length = 2326
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +3
Query: 129 VHEDLQTGEVSAGPVRSEQQKISVPQADVVSIEGATEQKT--EVSQDKY 269
+HEDL+ GE+S PV+S QK + + ++V ++ T E S KY
Sbjct: 153 LHEDLENGEIS--PVKS-LQKSEIEKGEIVGESWKKDEPTKGEFSHLKY 198
>At4g04130.1 68417.m00583 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At2g11345, At3g42690
Length = 1200
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
Frame = +3
Query: 201 PQADV-VSIEGATEQKTEVSQDKYESFSEVSN--SPQHAPPEDVIPKIKTEVIDKPLDLK 371
P D + ++G E S D +E + N PQ E + T DKP+D K
Sbjct: 609 PAVDTDIGVDGGGTVNLEGSVDPWELYGSTKNISEPQEMGRESPTSPVPTATQDKPMDTK 668
>At3g51540.1 68416.m05644 expressed protein mucin 5AC, Homo sapiens,
PIR:S53363
Length = 438
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 262 TNTSHSPKFPTRRNTLRPRTSSPRSKLRSSINRST 366
T TS +P F T + R R+ +PR+K + + N S+
Sbjct: 178 TTTSTTPSFKTAGDAQRSRSLTPRAKPQIAANASS 212
>At2g39560.1 68415.m04853 expressed protein
Length = 233
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 193 IFCCSERTGPADTSPVCKSSCTSP 122
IFCCS T P+ +SP SS ++P
Sbjct: 58 IFCCSSSTNPSSSSP-SSSSFSNP 80
>At5g59660.1 68418.m07480 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 842
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 282 EVSNSPQHAPPEDVIPKIKTEV-IDKPLDLKTKAWSPI 392
EV+NS +APP+D + T PL ++ + SPI
Sbjct: 195 EVNNSNNYAPPKDALRNAATPTNASAPLTIEWPSGSPI 232
>At5g39050.1 68418.m04725 transferase family protein similar to
anthocyanin 5-aromatic acyltransferase from Gentiana
triflora GI:4185599, malonyl CoA:anthocyanin
5-O-glucoside-6'''-O-malonyltransferase from Perilla
frutescens GI:17980232, Salvia splendens GI:17980234;
contains Pfam profile PF02458 transferase family
Length = 348
Score = 27.5 bits (58), Expect = 8.6
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Frame = +3
Query: 105 TMALYPGLVHEDLQTGEVSAGPVRSEQQKISVPQADVVSIEGA-TEQKTEVSQDKYESFS 281
T LYP LV E L + SA V S Q + Q +S+ + + + +S++
Sbjct: 129 TTELYP-LVPE-LHVSDDSASAV-SFQVTLFPNQGFCISVNAHHAVLDGKTTTNFLKSWA 185
Query: 282 EVSNSPQHAPPEDVIPKIKTEVIDKPLDLKTK---AWSPIDRTXWTNATKP 425
+ P+D+IP VI P+DL TK AW + + +T +P
Sbjct: 186 RTCKNQDSFLPQDLIPVYDRTVIKDPMDLDTKILNAWHRVAKV-FTGGKEP 235
>At4g36240.1 68417.m05155 zinc finger (GATA type) family protein
NTL1 protein, curled-leaved tobacco, PIR2:S46419
Length = 238
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Frame = +3
Query: 192 ISVPQADVVSIEGATEQKTEVSQD--KYESFSEVSNSPQHAPPEDVI 326
+ + AD S+E ++ Q+ E Q+ K++SFS+ S + +PPED++
Sbjct: 17 LDLSNADT-SLESSSSQRKEDEQEREKFKSFSD--QSTRLSPPEDLL 60
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 27.5 bits (58), Expect = 8.6
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +1
Query: 220 LLRALQNKKPRYPRTNTSHSPKFPTRRNTLRPRTSSPRSKLRSSINRS 363
L R ++ P R S SP P RR ++RPR SP R S++RS
Sbjct: 626 LSRRSISRSPVRGRRRISRSP-VPARRRSVRPR--SPPPDRRRSLSRS 670
>At4g15840.1 68417.m02409 expressed protein
Length = 660
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 204 QADVVSIEGATEQKTEVSQDKYESFSEVSNSP 299
+ VV+IEG +E+ +S D + S ++ NSP
Sbjct: 144 EGSVVAIEGPSEEAYHLSNDSWLSGADSRNSP 175
>At2g30580.1 68415.m03726 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 420
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/47 (21%), Positives = 22/47 (46%)
Frame = +3
Query: 255 SQDKYESFSEVSNSPQHAPPEDVIPKIKTEVIDKPLDLKTKAWSPID 395
S + + F++ +A P + + + +D+P D K W P++
Sbjct: 169 SPETLKKFTQNKRQSSYANPNQSLSNRRNKDVDEPWDSKLHLWKPLN 215
>At1g63750.1 68414.m07214 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1131
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 538 KMSDDTRLLCRIRGAEDHYD 597
KMS+++ LLCRI G YD
Sbjct: 910 KMSNESELLCRINGESCSYD 929
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,689,901
Number of Sequences: 28952
Number of extensions: 237929
Number of successful extensions: 913
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1428369392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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