Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0056
(787 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68011-2|CAA92013.2| 381|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z83233-8|CAB05759.2| 378|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z81563-1|CAB04563.1| 257|Caenorhabditis elegans Hypothetical pr... 29 5.0
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 29 5.0
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 29 5.0
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 29 5.0
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 29 5.0
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 5.0
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 5.0
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 29 5.0
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 5.0
Z74045-1|CAA98552.1| 535|Caenorhabditis elegans Hypothetical pr... 28 6.6
>Z68011-2|CAA92013.2| 381|Caenorhabditis elegans Hypothetical
protein T21B6.2 protein.
Length = 381
Score = 30.3 bits (65), Expect = 1.6
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +1
Query: 505 FPNWLEEKVDLPSIFENISEV 567
FPNW++EKV+ S+ + I+E+
Sbjct: 205 FPNWIDEKVNGKSLLDTIAEI 225
>Z83233-8|CAB05759.2| 378|Caenorhabditis elegans Hypothetical
protein K06B4.8 protein.
Length = 378
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 170 KTPTSLDINPSGLLFAFVELNHYNNEC 250
KTP LD +L+ F+ELN N EC
Sbjct: 232 KTPALLDQTSCMVLYKFIELNITNEEC 258
>Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical
protein ZK1151.1i protein.
Length = 1497
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 523 EKVDLPSIFENISEVPERVDPQPPAAV 603
EK+DL I + I +V RVD PPAAV
Sbjct: 552 EKLDL--ILKRIEDVEARVDTSPPAAV 576
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical
protein ZK1151.1h protein.
Length = 3424
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 523 EKVDLPSIFENISEVPERVDPQPPAAV 603
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 523 EKVDLPSIFENISEVPERVDPQPPAAV 603
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 523 EKVDLPSIFENISEVPERVDPQPPAAV 603
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical
protein ZK1151.1a protein.
Length = 3436
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 523 EKVDLPSIFENISEVPERVDPQPPAAV 603
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 523 EKVDLPSIFENISEVPERVDPQPPAAV 603
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical
protein ZK1151.1f protein.
Length = 3322
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 523 EKVDLPSIFENISEVPERVDPQPPAAV 603
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical
protein ZK1151.1e protein.
Length = 3323
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 523 EKVDLPSIFENISEVPERVDPQPPAAV 603
EK+DL I + I +V RVD PPAAV
Sbjct: 312 EKLDL--ILKRIEDVEARVDTSPPAAV 336
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical
protein ZK1151.1d protein.
Length = 3405
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 523 EKVDLPSIFENISEVPERVDPQPPAAV 603
EK+DL I + I +V RVD PPAAV
Sbjct: 394 EKLDL--ILKRIEDVEARVDTSPPAAV 418
>Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical
protein ZK1151.1i protein.
Length = 1497
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 523 EKVDLPSIFENISEVPERVDPQPPAAV 603
EK+DL I + I +V RVD PPAAV
Sbjct: 552 EKLDL--ILKRIEDVEARVDTSPPAAV 576
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical
protein ZK1151.1h protein.
Length = 3424
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 523 EKVDLPSIFENISEVPERVDPQPPAAV 603
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 523 EKVDLPSIFENISEVPERVDPQPPAAV 603
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 523 EKVDLPSIFENISEVPERVDPQPPAAV 603
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical
protein ZK1151.1a protein.
Length = 3436
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 523 EKVDLPSIFENISEVPERVDPQPPAAV 603
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 523 EKVDLPSIFENISEVPERVDPQPPAAV 603
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical
protein ZK1151.1f protein.
Length = 3322
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 523 EKVDLPSIFENISEVPERVDPQPPAAV 603
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical
protein ZK1151.1e protein.
Length = 3323
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 523 EKVDLPSIFENISEVPERVDPQPPAAV 603
EK+DL I + I +V RVD PPAAV
Sbjct: 312 EKLDL--ILKRIEDVEARVDTSPPAAV 336
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical
protein ZK1151.1d protein.
Length = 3405
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 523 EKVDLPSIFENISEVPERVDPQPPAAV 603
EK+DL I + I +V RVD PPAAV
Sbjct: 394 EKLDL--ILKRIEDVEARVDTSPPAAV 418
>Z81563-1|CAB04563.1| 257|Caenorhabditis elegans Hypothetical
protein K04H8.1 protein.
Length = 257
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 638 WAARSPKGLEARTAAGGCGSTRSGTSE 558
WA P G+ AGGC R GT E
Sbjct: 198 WADNQPSGMRDNKGAGGCIVFRVGTKE 224
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 523 EKVDLPSIFENISEVPERVDPQPPAAV 603
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 523 EKVDLPSIFENISEVPERVDPQPPAAV 603
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 523 EKVDLPSIFENISEVPERVDPQPPAAV 603
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 523 EKVDLPSIFENISEVPERVDPQPPAAV 603
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 523 EKVDLPSIFENISEVPERVDPQPPAAV 603
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 523 EKVDLPSIFENISEVPERVDPQPPAAV 603
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 523 EKVDLPSIFENISEVPERVDPQPPAAV 603
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 523 EKVDLPSIFENISEVPERVDPQPPAAV 603
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z74045-1|CAA98552.1| 535|Caenorhabditis elegans Hypothetical
protein T27F2.1 protein.
Length = 535
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = -3
Query: 689 LTRQHHKPFRIPAAVLQWAARSPKG----LEARTAAGGCGSTRSGTSEMFSKI 543
+T + ++IP + W ++PKG L+ R AA G G ++ +E F+K+
Sbjct: 240 MTAKDQNDWKIPPCISNW--KNPKGFTVGLDKRLAADGRGLQQTHINENFAKL 290
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,477,838
Number of Sequences: 27780
Number of extensions: 361614
Number of successful extensions: 966
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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