Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0055
         (403 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058727-1|AAL13956.1|  540|Drosophila melanogaster LD47264p pro...    31   0.76 
AE014298-829|AAF46110.1|  540|Drosophila melanogaster CG5966-PA ...    31   0.76 
AY069570-1|AAL39715.1|  573|Drosophila melanogaster LD30822p pro...    27   9.4  
AE014297-1134|AAF54519.1|  573|Drosophila melanogaster CG6293-PA...    27   9.4  

>AY058727-1|AAL13956.1|  540|Drosophila melanogaster LD47264p
           protein.
          Length = 540

 Score = 30.7 bits (66), Expect = 0.76
 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
 Frame = +3

Query: 261 DMELERCYDIYGCFSKAYPW-TEHRPDNYFPASVESMAIRYPTFTRR 398
           D+   +C+ +YGCF    PW T  R  N  P     +   +   TRR
Sbjct: 40  DINEVKCFGVYGCFPINGPWNTVTRSINVHPQKPSEIEPHFTLHTRR 86


>AE014298-829|AAF46110.1|  540|Drosophila melanogaster CG5966-PA
           protein.
          Length = 540

 Score = 30.7 bits (66), Expect = 0.76
 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
 Frame = +3

Query: 261 DMELERCYDIYGCFSKAYPW-TEHRPDNYFPASVESMAIRYPTFTRR 398
           D+   +C+ +YGCF    PW T  R  N  P     +   +   TRR
Sbjct: 40  DINEVKCFGVYGCFPINGPWNTVTRSINVHPQKPSEIEPHFTLHTRR 86


>AY069570-1|AAL39715.1|  573|Drosophila melanogaster LD30822p
           protein.
          Length = 573

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 12/41 (29%), Positives = 26/41 (63%)
 Frame = +1

Query: 253 LVMIWNWSDVMTSTDVFLKPTRGRSTDPIIISLHLSSQWQY 375
           ++++W    ++T+TDVF  P+    TD + +++  S++W Y
Sbjct: 263 IMIMWGLCGILTATDVF-PPSHPSRTD-VRLNVLTSAKWFY 301


>AE014297-1134|AAF54519.1|  573|Drosophila melanogaster CG6293-PA
           protein.
          Length = 573

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 12/41 (29%), Positives = 26/41 (63%)
 Frame = +1

Query: 253 LVMIWNWSDVMTSTDVFLKPTRGRSTDPIIISLHLSSQWQY 375
           ++++W    ++T+TDVF  P+    TD + +++  S++W Y
Sbjct: 263 IMIMWGLCGILTATDVF-PPSHPSRTD-VRLNVLTSAKWFY 301


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,692,490
Number of Sequences: 53049
Number of extensions: 337807
Number of successful extensions: 1084
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1084
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1170601320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)