Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0053
         (636 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF040661-11|AAG24210.1|  211|Caenorhabditis elegans Hypothetical...    30   1.2  
AF040661-10|AAG24215.1|  426|Caenorhabditis elegans Hypothetical...    30   1.6  
Z78416-1|CAB01682.1|  425|Caenorhabditis elegans Hypothetical pr...    29   2.1  
AF293976-1|AAG17881.1|  425|Caenorhabditis elegans CAB-1 protein.      29   2.1  
AF040661-12|AAG24221.1|  210|Caenorhabditis elegans Hypothetical...    29   2.8  
AF125459-12|AAD12832.1|  533|Caenorhabditis elegans Hypothetical...    29   3.7  
Z66513-3|CAA91331.1|  186|Caenorhabditis elegans Hypothetical pr...    28   4.9  
AL132847-1|CAB63371.1|  375|Caenorhabditis elegans Hypothetical ...    28   4.9  
AF125459-13|AAD12833.1|  605|Caenorhabditis elegans Hypothetical...    27   8.5  
AF026207-1|AAB71266.1|  522|Caenorhabditis elegans Hypothetical ...    27   8.5  
AC006636-2|AAF39797.1|  325|Caenorhabditis elegans Hypothetical ...    27   8.5  

>AF040661-11|AAG24210.1|  211|Caenorhabditis elegans Hypothetical
           protein W10G11.15 protein.
          Length = 211

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 14/55 (25%), Positives = 23/55 (41%)
 Frame = -2

Query: 308 RPSGRWCEATIRGIMPERSKAEASLAESGKDMLTVEPRESGXSKQCDFTSRVSHS 144
           RPSG WC     G    ++ AE S    G  +  ++ R      Q    ++++ S
Sbjct: 49  RPSGGWCMRVFEGFNAAKTDAEKSCKSVGSTLSGIQNRNEALYIQTALLAQIARS 103


>AF040661-10|AAG24215.1|  426|Caenorhabditis elegans Hypothetical
           protein W10G11.6 protein.
          Length = 426

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -2

Query: 308 RPSGRWCEATIRGIMPERSKAEASLAESGKDMLTVEPRE 192
           RPSG WC     GI   + +AE + A  G  +  ++ R+
Sbjct: 93  RPSGGWCMRVFTGIHDAKIEAERACAAKGGTLTGLQNRD 131



 Score = 29.1 bits (62), Expect = 2.8
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = -2

Query: 347 REEPQFRTFGSCTRPSGRWCEATIRGIMPERSKAEASLAESGKDMLTVE-PRES 189
           R EP +R F    RPSG WC     G    ++ AEA+    G  +  ++ P+E+
Sbjct: 255 RCEPGWRFFN---RPSGGWCIRVFTGFHAAKADAEAACQAVGATLSGLQNPQEA 305


>Z78416-1|CAB01682.1|  425|Caenorhabditis elegans Hypothetical
           protein C23H4.1 protein.
          Length = 425

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 20/66 (30%), Positives = 29/66 (43%)
 Frame = +1

Query: 181 EXPDSRGSTVSISLPDSARLASALERSGIIPRMVASHHRPLGRVHEPNVRNCGSSRTEQY 360
           + P     T+S    D  RLA++ E SG  PR  +S    L       V   G+     Y
Sbjct: 263 QEPQPAKQTISSQTVDKRRLATSAEYSGSAPRYSSSSLLLLAVGTVMCVGLIGTVAGGTY 322

Query: 361 YYRNDK 378
           YY+N++
Sbjct: 323 YYKNNR 328


>AF293976-1|AAG17881.1|  425|Caenorhabditis elegans CAB-1 protein.
          Length = 425

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 20/66 (30%), Positives = 29/66 (43%)
 Frame = +1

Query: 181 EXPDSRGSTVSISLPDSARLASALERSGIIPRMVASHHRPLGRVHEPNVRNCGSSRTEQY 360
           + P     T+S    D  RLA++ E SG  PR  +S    L       V   G+     Y
Sbjct: 263 QEPQPAKQTISSQTVDKRRLATSAEYSGSAPRYSSSSLLLLAVGTVMCVGLIGTVAGGTY 322

Query: 361 YYRNDK 378
           YY+N++
Sbjct: 323 YYKNNR 328


>AF040661-12|AAG24221.1|  210|Caenorhabditis elegans Hypothetical
           protein W10G11.14 protein.
          Length = 210

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 16/66 (24%), Positives = 28/66 (42%)
 Frame = -2

Query: 341 EPQFRTFGSCTRPSGRWCEATIRGIMPERSKAEASLAESGKDMLTVEPRESGXSKQCDFT 162
           EP ++ F    RPSG WC     G   +++ AE S    G  +  ++ +      Q    
Sbjct: 41  EPGWKFFN---RPSGGWCMRVFAGFNAKKADAEKSCQAVGSTLSGIQNKNEALYIQTALL 97

Query: 161 SRVSHS 144
           +++  S
Sbjct: 98  AQIPQS 103


>AF125459-12|AAD12832.1|  533|Caenorhabditis elegans Hypothetical
           protein Y25C1A.4 protein.
          Length = 533

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/55 (27%), Positives = 24/55 (43%)
 Frame = -2

Query: 308 RPSGRWCEATIRGIMPERSKAEASLAESGKDMLTVEPRESGXSKQCDFTSRVSHS 144
           R SG WC     G    +  AEA+  + G  +  +E +E     Q    +R+S +
Sbjct: 370 RQSGGWCMKVFTGFHAAKVDAEAACKDVGATLSGLENKEEAIFIQNALLARISQA 424



 Score = 27.9 bits (59), Expect = 6.4
 Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
 Frame = -2

Query: 308 RPSGRWCEATIRGIMPERSKAEASLAESGKDMLT-VEPRESGXSKQCDFTSRVSHSKRET 132
           RPSG WC     G    +  AE +   +G   LT ++ +      QC++ +    S    
Sbjct: 162 RPSGGWCIKVFPGYFALKEHAENACQANGAATLTGLQNKAEALFIQCEYRNSPYFSCFSC 221

Query: 131 RRRSPFGSRRSMLSVFF 81
            + S  G   S + V +
Sbjct: 222 FQNSVLGYCSSTVEVLY 238


>Z66513-3|CAA91331.1|  186|Caenorhabditis elegans Hypothetical
           protein F54D5.4 protein.
          Length = 186

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
 Frame = +1

Query: 154 TRL-VKSHCLEXPDSRGSTVSISLPD-SARLASALERSGIIPRMVASHHRPLGRVHEPNV 327
           TRL  K +C E   + G+ +     D S    + +ERS  I  ++A H     R  +PN 
Sbjct: 44  TRLNTKYYCFEGCLNTGTALQNCKVDMSGNNGTRIERSREIKEVIALHQLARQRDEDPNA 103

Query: 328 RNC 336
           ++C
Sbjct: 104 KSC 106


>AL132847-1|CAB63371.1|  375|Caenorhabditis elegans Hypothetical
           protein Y48G10A.2 protein.
          Length = 375

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 10/51 (19%), Positives = 27/51 (52%)
 Frame = -2

Query: 281 TIRGIMPERSKAEASLAESGKDMLTVEPRESGXSKQCDFTSRVSHSKRETR 129
           +++G +   +    ++    K ++  EP+E+   +  D+ + ++HSK E +
Sbjct: 306 SLKGQIKSENYTSIAVTRLYKMLIRTEPKETALRRAADYLNELTHSKTEKK 356


>AF125459-13|AAD12833.1|  605|Caenorhabditis elegans Hypothetical
           protein Y25C1A.3 protein.
          Length = 605

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 15/63 (23%), Positives = 27/63 (42%)
 Frame = -2

Query: 341 EPQFRTFGSCTRPSGRWCEATIRGIMPERSKAEASLAESGKDMLTVEPRESGXSKQCDFT 162
           EP ++ F    RPSG WC     G    +  AE +   +G  +  ++ ++     Q    
Sbjct: 376 EPGYKRFN---RPSGPWCIKVFTGYFAAQIDAERACQAAGGALTGLQNQDEALYIQSSLL 432

Query: 161 SRV 153
           S++
Sbjct: 433 SQI 435


>AF026207-1|AAB71266.1|  522|Caenorhabditis elegans Hypothetical
           protein H42K12.3 protein.
          Length = 522

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 15/64 (23%), Positives = 29/64 (45%)
 Frame = -2

Query: 260 ERSKAEASLAESGKDMLTVEPRESGXSKQCDFTSRVSHSKRETRRRSPFGSRRSMLSVFF 81
           E  +     A+S + +   EP E+  S   D+T     ++R+ RRR     R+ + ++  
Sbjct: 359 EEQEITEDSADSSRAIEPQEPEETYFSDWSDWTPCTKSNERQVRRRRCLNLRKCLGALMQ 418

Query: 80  LNTC 69
           +  C
Sbjct: 419 VQNC 422


>AC006636-2|AAF39797.1|  325|Caenorhabditis elegans Hypothetical
           protein F40C5.1 protein.
          Length = 325

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = +1

Query: 199 GSTVSISLPDSARLASALERSGIIPRMVASHHRPLGRVHEPNVRNCG 339
           GS     +  +ARLA  L + G+   +V   H+ +  +   +++NCG
Sbjct: 207 GSDTEERVSSAARLADILRKQGVRGSLVEKIHKNILSMFLKDLQNCG 253


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,091,209
Number of Sequences: 27780
Number of extensions: 279949
Number of successful extensions: 720
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)