Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0052
         (772 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011437-1|AAR99095.1|  380|Drosophila melanogaster RE61404p pro...    31   1.3  
BT010074-1|AAQ22543.1| 1064|Drosophila melanogaster LD11117p pro...    31   1.3  
AE014297-3841|AAF56498.3| 1069|Drosophila melanogaster CG31092-P...    31   1.3  
AF297644-1|AAK15256.1| 3497|Drosophila melanogaster dystrophin-l...    31   2.3  
AF277386-1|AAG17395.1| 3127|Drosophila melanogaster dystrophin-l...    31   2.3  
AE014297-2671|ABI31178.1| 3504|Drosophila melanogaster CG34157-P...    31   2.3  
AE014297-2670|AAF55675.2| 3127|Drosophila melanogaster CG34157-P...    31   2.3  
AE014297-2669|AAF55673.2| 3497|Drosophila melanogaster CG34157-P...    31   2.3  
AE014297-2668|ABI31176.1| 3598|Drosophila melanogaster CG34157-P...    31   2.3  
AE014297-2666|ABI31180.1| 3529|Drosophila melanogaster CG34157-P...    31   2.3  
AY118773-1|AAM50633.1| 1073|Drosophila melanogaster GH11711p pro...    29   5.3  
AE014134-1921|AAF52979.2| 1073|Drosophila melanogaster CG31872-P...    29   5.3  
M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair pro...    29   9.3  
BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p pro...    29   9.3  
AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p pro...    29   9.3  
AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA...    29   9.3  

>BT011437-1|AAR99095.1|  380|Drosophila melanogaster RE61404p
           protein.
          Length = 380

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +3

Query: 213 TNVVNNLIRNNKMNAWSTPTSSGCKAPRTSSGIVSRLSSH 332
           T   + L  N   N+ S+ +SSGC+ P  +SG     S+H
Sbjct: 15  TTTQSELTTNESANSRSSSSSSGCREPSKTSGFFYSASTH 54


>BT010074-1|AAQ22543.1| 1064|Drosophila melanogaster LD11117p
           protein.
          Length = 1064

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +3

Query: 213 TNVVNNLIRNNKMNAWSTPTSSGCKAPRTSSGIVSRLSSH 332
           T   + L  N   N+ S+ +SSGC+ P  +SG     S+H
Sbjct: 15  TTTQSELTTNESANSRSSSSSSGCREPSKTSGFFYSASTH 54


>AE014297-3841|AAF56498.3| 1069|Drosophila melanogaster CG31092-PA,
           isoform A protein.
          Length = 1069

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +3

Query: 213 TNVVNNLIRNNKMNAWSTPTSSGCKAPRTSSGIVSRLSSH 332
           T   + L  N   N+ S+ +SSGC+ P  +SG     S+H
Sbjct: 15  TTTQSELTTNESANSRSSSSSSGCREPSKTSGFFYSASTH 54


>AF297644-1|AAK15256.1| 3497|Drosophila melanogaster dystrophin-like
            protein DLP2 protein.
          Length = 3497

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = +3

Query: 96   TAFNEILAEHLYNDVIIADYDSAVER--SKLIYTDNKGELITNVVNNLIRNNKMNA 257
            T  ++IL++HL NDV I D     +R   + +  +   + I+ +++   RN K+ A
Sbjct: 1295 TRVDDILSDHLDNDVTIVDQPEEFQRLAHEFVANEKNFKEISELIDEHTRNGKVGA 1350


>AF277386-1|AAG17395.1| 3127|Drosophila melanogaster dystrophin-like
            protein DYS protein.
          Length = 3127

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = +3

Query: 96   TAFNEILAEHLYNDVIIADYDSAVER--SKLIYTDNKGELITNVVNNLIRNNKMNA 257
            T  ++IL++HL NDV I D     +R   + +  +   + I+ +++   RN K+ A
Sbjct: 1295 TRVDDILSDHLDNDVTIVDQPEEFQRLAHEFVANEKNFKEISELIDEHTRNGKVGA 1350


>AE014297-2671|ABI31178.1| 3504|Drosophila melanogaster CG34157-PG,
            isoform G protein.
          Length = 3504

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = +3

Query: 96   TAFNEILAEHLYNDVIIADYDSAVER--SKLIYTDNKGELITNVVNNLIRNNKMNA 257
            T  ++IL++HL NDV I D     +R   + +  +   + I+ +++   RN K+ A
Sbjct: 1302 TRVDDILSDHLDNDVTIVDQPEEFQRLAHEFVANEKNFKEISELIDEHTRNGKVGA 1357


>AE014297-2670|AAF55675.2| 3127|Drosophila melanogaster CG34157-PC,
            isoform C protein.
          Length = 3127

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = +3

Query: 96   TAFNEILAEHLYNDVIIADYDSAVER--SKLIYTDNKGELITNVVNNLIRNNKMNA 257
            T  ++IL++HL NDV I D     +R   + +  +   + I+ +++   RN K+ A
Sbjct: 1295 TRVDDILSDHLDNDVTIVDQPEEFQRLAHEFVANEKNFKEISELIDEHTRNGKVGA 1350


>AE014297-2669|AAF55673.2| 3497|Drosophila melanogaster CG34157-PA,
            isoform A protein.
          Length = 3497

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = +3

Query: 96   TAFNEILAEHLYNDVIIADYDSAVER--SKLIYTDNKGELITNVVNNLIRNNKMNA 257
            T  ++IL++HL NDV I D     +R   + +  +   + I+ +++   RN K+ A
Sbjct: 1295 TRVDDILSDHLDNDVTIVDQPEEFQRLAHEFVANEKNFKEISELIDEHTRNGKVGA 1350


>AE014297-2668|ABI31176.1| 3598|Drosophila melanogaster CG34157-PH,
            isoform H protein.
          Length = 3598

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = +3

Query: 96   TAFNEILAEHLYNDVIIADYDSAVER--SKLIYTDNKGELITNVVNNLIRNNKMNA 257
            T  ++IL++HL NDV I D     +R   + +  +   + I+ +++   RN K+ A
Sbjct: 1295 TRVDDILSDHLDNDVTIVDQPEEFQRLAHEFVANEKNFKEISELIDEHTRNGKVGA 1350


>AE014297-2666|ABI31180.1| 3529|Drosophila melanogaster CG34157-PF,
            isoform F protein.
          Length = 3529

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = +3

Query: 96   TAFNEILAEHLYNDVIIADYDSAVER--SKLIYTDNKGELITNVVNNLIRNNKMNA 257
            T  ++IL++HL NDV I D     +R   + +  +   + I+ +++   RN K+ A
Sbjct: 1327 TRVDDILSDHLDNDVTIVDQPEEFQRLAHEFVANEKNFKEISELIDEHTRNGKVGA 1382


>AY118773-1|AAM50633.1| 1073|Drosophila melanogaster GH11711p
           protein.
          Length = 1073

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 421 GQQRQDQFKSQLEIHSAVGEQQGLLQDREPERKQNLGIE 537
           G Q+QDQ +SQ+E  + V  +QGL Q     + Q  G+E
Sbjct: 218 GDQKQDQAQSQIEDEAEV-LRQGLAQTESQIQNQRQGLE 255


>AE014134-1921|AAF52979.2| 1073|Drosophila melanogaster CG31872-PA
           protein.
          Length = 1073

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 421 GQQRQDQFKSQLEIHSAVGEQQGLLQDREPERKQNLGIE 537
           G Q+QDQ +SQ+E  + V  +QGL Q     + Q  G+E
Sbjct: 218 GDQKQDQAQSQIEDEAEV-LRQGLAQTESQIQNQRQGLE 255


>M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair
           protein protein.
          Length = 317

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = +3

Query: 585 NFDGFRAQWYLVPAELNNEFYSSSLTGTTNMGFXRCSKXRWTALGXRMGLGGYKRSSYRK 764
           N   ++AQ+++   EL +EF    + G  N+G  +    R +  G  + L G K +  RK
Sbjct: 5   NKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMG-KNTMMRK 63

Query: 765 A 767
           A
Sbjct: 64  A 64


>BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p
           protein.
          Length = 317

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = +3

Query: 585 NFDGFRAQWYLVPAELNNEFYSSSLTGTTNMGFXRCSKXRWTALGXRMGLGGYKRSSYRK 764
           N   ++AQ+++   EL +EF    + G  N+G  +    R +  G  + L G K +  RK
Sbjct: 5   NKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMG-KNTMMRK 63

Query: 765 A 767
           A
Sbjct: 64  A 64


>AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p
           protein.
          Length = 317

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = +3

Query: 585 NFDGFRAQWYLVPAELNNEFYSSSLTGTTNMGFXRCSKXRWTALGXRMGLGGYKRSSYRK 764
           N   ++AQ+++   EL +EF    + G  N+G  +    R +  G  + L G K +  RK
Sbjct: 5   NKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMG-KNTMMRK 63

Query: 765 A 767
           A
Sbjct: 64  A 64


>AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA
           protein.
          Length = 317

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = +3

Query: 585 NFDGFRAQWYLVPAELNNEFYSSSLTGTTNMGFXRCSKXRWTALGXRMGLGGYKRSSYRK 764
           N   ++AQ+++   EL +EF    + G  N+G  +    R +  G  + L G K +  RK
Sbjct: 5   NKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMG-KNTMMRK 63

Query: 765 A 767
           A
Sbjct: 64  A 64


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,756,720
Number of Sequences: 53049
Number of extensions: 686649
Number of successful extensions: 1958
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1956
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)