Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0051
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   1.8  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   2.4  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   7.4  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   7.4  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   7.4  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   9.7  

>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 304 SRCPSPAILTVKKNAPDKQKYQTT 233
           S   SP  + +KK +P  Q Y+ T
Sbjct: 228 STSASPPTVNIKKESPQMQSYRPT 251


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 186 KEINPVFLTCRYFTTCIISAQ*F 118
           K ++ VF   R+FT CI + + F
Sbjct: 425 KHVDKVFENARFFTDCIKNREGF 447


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 125 NNFSRTPLPEYIRHWKSDKD 66
           NN     +P Y R WK D+D
Sbjct: 282 NNKLILGIPAYGRAWKMDED 301


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -1

Query: 510 PYHCHQCGKENNQCTN 463
           PY C  C K  +Q  N
Sbjct: 21  PYRCIDCNKSFSQAAN 36


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -1

Query: 510 PYHCHQCGKENNQCTN 463
           PY C  C K  +Q  N
Sbjct: 277 PYRCIDCNKSFSQAAN 292


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 376 FTVSEAMEHFAYLP 417
           + VSE  E+F YLP
Sbjct: 56  YNVSEISENFYYLP 69


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,889
Number of Sequences: 336
Number of extensions: 4441
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)