Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0051
(702 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacti... 31 0.80
Z98860-1|CAB11544.1| 677|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z46795-2|CAB54311.1| 932|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z46795-1|CAA86788.1| 924|Caenorhabditis elegans Hypothetical pr... 30 1.4
CU457741-1|CAM36342.1| 347|Caenorhabditis elegans Hypothetical ... 30 1.4
Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical p... 29 2.4
Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical p... 29 2.4
Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical pr... 29 2.4
U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein. 29 2.4
DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-t... 29 3.2
AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-t... 29 3.2
AF045640-7|AAU05589.1| 978|Caenorhabditis elegans Novel channel... 29 3.2
AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel... 29 3.2
AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel... 29 3.2
AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel... 29 3.2
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 28 5.6
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 28 5.6
Z49867-2|CAA90028.1| 346|Caenorhabditis elegans Hypothetical pr... 27 9.8
AF099922-5|AAK21406.1| 401|Caenorhabditis elegans Hypothetical ... 27 9.8
AF016685-3|AAG24145.2| 422|Caenorhabditis elegans Hypothetical ... 27 9.8
>AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacting
protein protein 6 protein.
Length = 1106
Score = 31.1 bits (67), Expect = 0.80
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = -2
Query: 368 FLALYSSPVTGL-PFLNRENIRFSLSIASDFDSKEKRSRQAKISDYDCELPDRGN 207
F + S V G+ F+N + S S +F +KR+R A S+ C++P++G+
Sbjct: 99 FFGMSSKKVRGVFSFVNEDGRILSNSERLEFLRSQKRARSASRSNSVCQVPEKGS 153
>Z98860-1|CAB11544.1| 677|Caenorhabditis elegans Hypothetical
protein Y26G10.1 protein.
Length = 677
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +1
Query: 346 GDEYNAKNAIFTVSEAMEHFAYLPXGLYVFAYKKDVYLRVCTLIIFFAALVAVIWVPVAS 525
GD ++A+ HFA P L+VF + ++L +L F A++ AVI + +
Sbjct: 536 GDYFSAEMIFLMAFNRCIHFAAKPVSLWVFTRARILFL--VSLCAFLASIAAVILIQTSE 593
Query: 526 I 528
+
Sbjct: 594 L 594
>Z46795-2|CAB54311.1| 932|Caenorhabditis elegans Hypothetical
protein T19E10.1b protein.
Length = 932
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -3
Query: 322 IERTSGSRCPSPAILTVKKNAPDKQKYQTTIV-SYRIEVIDEGFTVKRDKPC 170
+E T G PSP + T PD + +T V S ++ V E F V + C
Sbjct: 233 LENTGGKLAPSPTLATHVVYNPDNDEVETLAVSSNQVHVTKEWFWVSLHRGC 284
>Z46795-1|CAA86788.1| 924|Caenorhabditis elegans Hypothetical
protein T19E10.1a protein.
Length = 924
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -3
Query: 322 IERTSGSRCPSPAILTVKKNAPDKQKYQTTIV-SYRIEVIDEGFTVKRDKPC 170
+E T G PSP + T PD + +T V S ++ V E F V + C
Sbjct: 233 LENTGGKLAPSPTLATHVVYNPDNDEVETLAVSSNQVHVTKEWFWVSLHRGC 284
>CU457741-1|CAM36342.1| 347|Caenorhabditis elegans Hypothetical
protein C42C1.1 protein.
Length = 347
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Frame = +1
Query: 454 YLRVCTLIIFFAALVAVIWVPVASI---WYAEXLIVVLWRKKPSLITILNAYWMAGFSFR 624
++R + I FF L V+ + VAS W+ L + L+ S+ TIL Y + F+ R
Sbjct: 220 FIRFASSIFFFTILCPVLML-VASFEIDWFYRNLCITLFELSFSVYTILTPYIIYKFNIR 278
Query: 625 LPM-FKXLYSMYNSAF 669
FK + S + F
Sbjct: 279 WHQEFKRVLSKITARF 294
>Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical protein
C06C3.1d protein.
Length = 968
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = -2
Query: 302 SLSIASDFDSKEKRSRQAKISDYDCELPDRGNRR 201
S S+AS FD E+RS + KISD + +L N R
Sbjct: 914 STSLAS-FDENERRSMERKISDLELQLKTATNLR 946
>Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical protein
C06C3.1c protein.
Length = 1124
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = -2
Query: 302 SLSIASDFDSKEKRSRQAKISDYDCELPDRGNRR 201
S S+AS FD E+RS + KISD + +L N R
Sbjct: 1070 STSLAS-FDENERRSMERKISDLELQLKTATNLR 1102
>Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical protein
C06C3.1b protein.
Length = 1019
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = -2
Query: 302 SLSIASDFDSKEKRSRQAKISDYDCELPDRGNRR 201
S S+AS FD E+RS + KISD + +L N R
Sbjct: 965 STSLAS-FDENERRSMERKISDLELQLKTATNLR 997
>Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical protein
C06C3.1a protein.
Length = 1016
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = -2
Query: 302 SLSIASDFDSKEKRSRQAKISDYDCELPDRGNRR 201
S S+AS FD E+RS + KISD + +L N R
Sbjct: 962 STSLAS-FDENERRSMERKISDLELQLKTATNLR 994
>Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = -2
Query: 302 SLSIASDFDSKEKRSRQAKISDYDCELPDRGNRR 201
S S+AS FD E+RS + KISD + +L N R
Sbjct: 914 STSLAS-FDENERRSMERKISDLELQLKTATNLR 946
>Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = -2
Query: 302 SLSIASDFDSKEKRSRQAKISDYDCELPDRGNRR 201
S S+AS FD E+RS + KISD + +L N R
Sbjct: 1070 STSLAS-FDENERRSMERKISDLELQLKTATNLR 1102
>Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical protein
C06C3.1b protein.
Length = 1019
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = -2
Query: 302 SLSIASDFDSKEKRSRQAKISDYDCELPDRGNRR 201
S S+AS FD E+RS + KISD + +L N R
Sbjct: 965 STSLAS-FDENERRSMERKISDLELQLKTATNLR 997
>Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical protein
C06C3.1a protein.
Length = 1016
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = -2
Query: 302 SLSIASDFDSKEKRSRQAKISDYDCELPDRGNRR 201
S S+AS FD E+RS + KISD + +L N R
Sbjct: 962 STSLAS-FDENERRSMERKISDLELQLKTATNLR 994
>U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein.
Length = 1016
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = -2
Query: 302 SLSIASDFDSKEKRSRQAKISDYDCELPDRGNRR 201
S S+AS FD E+RS + KISD + +L N R
Sbjct: 962 STSLAS-FDENERRSMERKISDLELQLKTATNLR 994
>DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1797
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 454 YLRVCTLIIFFAALVAVIWVPVASIWYAEXLIVV--LWRKK 570
+L CTLI F A LV +++ V + +AE + +W+KK
Sbjct: 315 FLYFCTLIFFLAWLVKNVFIAVITETFAEIRVQFSEMWQKK 355
>AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1831
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 454 YLRVCTLIIFFAALVAVIWVPVASIWYAEXLIVV--LWRKK 570
+L CTLI F A LV +++ V + +AE + +W+KK
Sbjct: 315 FLYFCTLIFFLAWLVKNVFIAVITETFAEIRVQFSEMWQKK 355
>AF045640-7|AAU05589.1| 978|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
b protein.
Length = 978
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 454 YLRVCTLIIFFAALVAVIWVPVASIWYAEXLIVV--LWRKK 570
+L CTLI F A LV +++ V + +AE + +W+KK
Sbjct: 373 FLYFCTLIFFLAWLVKNVFIAVITETFAEIRVQFSEMWQKK 413
>AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
a protein.
Length = 1562
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 454 YLRVCTLIIFFAALVAVIWVPVASIWYAEXLIVV--LWRKK 570
+L CTLI F A LV +++ V + +AE + +W+KK
Sbjct: 373 FLYFCTLIFFLAWLVKNVFIAVITETFAEIRVQFSEMWQKK 413
>AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
c protein.
Length = 1913
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 454 YLRVCTLIIFFAALVAVIWVPVASIWYAEXLIVV--LWRKK 570
+L CTLI F A LV +++ V + +AE + +W+KK
Sbjct: 373 FLYFCTLIFFLAWLVKNVFIAVITETFAEIRVQFSEMWQKK 413
>AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
d protein.
Length = 1861
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 454 YLRVCTLIIFFAALVAVIWVPVASIWYAEXLIVV--LWRKK 570
+L CTLI F A LV +++ V + +AE + +W+KK
Sbjct: 345 FLYFCTLIFFLAWLVKNVFIAVITETFAEIRVQFSEMWQKK 385
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 7/34 (20%)
Frame = -1
Query: 525 RGNW----HPYHCHQCGKE---NNQCTNPQINIF 445
RGNW P CH CG+E + +C P++ F
Sbjct: 560 RGNWDGGERPRGCHNCGEEGHISKECDKPKVPRF 593
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 7/34 (20%)
Frame = -1
Query: 525 RGNW----HPYHCHQCGKE---NNQCTNPQINIF 445
RGNW P CH CG+E + +C P++ F
Sbjct: 560 RGNWDGGERPRGCHNCGEEGHISKECDKPKVPRF 593
>Z49867-2|CAA90028.1| 346|Caenorhabditis elegans Hypothetical
protein C33D3.4 protein.
Length = 346
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +3
Query: 450 CLFAGLYIDYFLCRIGGSDMGASCLYLVRRVXNRGIVEKEAIINNHFERV 599
C+ I+YF+ +I D L ++R V N ++EKEA++ F V
Sbjct: 2 CVLQYRDINYFIDKIESFDDEWVQLEILRIVRNLILLEKEALVRKFFANV 51
>AF099922-5|AAK21406.1| 401|Caenorhabditis elegans Hypothetical
protein F56F11.2 protein.
Length = 401
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = +1
Query: 283 SLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVS 387
++ ++ F + KN P GD+ +A+FT++
Sbjct: 147 TIRLEESTKTFRILKNSIPTAGDDTERNSALFTIA 181
>AF016685-3|AAG24145.2| 422|Caenorhabditis elegans Hypothetical
protein F59E11.11 protein.
Length = 422
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 61 CRSLSDFQ*RMYSGKGVREKLLCRYYAGCE 150
CR+ + F RM G G R+K CR Y CE
Sbjct: 43 CRACAAFFRRMIVGTGYRQK--CRSYKTCE 70
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,731,726
Number of Sequences: 27780
Number of extensions: 401736
Number of successful extensions: 1228
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1228
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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