Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0049
         (637 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   4.6  
AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse t...    23   6.1  

>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 13/54 (24%), Positives = 25/54 (46%)
 Frame = +1

Query: 406  TILV*RSNRLECEFFNSLSNKSNVSPNYNRALNPXXXXXKVKTNCTRVHNAYMY 567
            TI     + L   F ++ SN S ++ ++  +  P      + T C   +++YMY
Sbjct: 3090 TITCYEQHGLSYVFPHNTSNISGITEDHYSSCYPIEYNGLLTTACAGTNSSYMY 3143


>AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 616 CAFVCVNTLYTYDVSLYTCKRYVLAY 539
           CA   V  L  Y+  LY C+ Y+  Y
Sbjct: 9   CAIAKVFELVIYNNLLYACRSYLSPY 34


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 637,451
Number of Sequences: 2352
Number of extensions: 11812
Number of successful extensions: 13
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)