Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0049
         (637 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF036704-3|AAB88559.2|  503|Caenorhabditis elegans Hypothetical ...    29   2.8  
Z72508-8|CAA96640.2|  366|Caenorhabditis elegans Hypothetical pr...    28   6.4  

>AF036704-3|AAB88559.2|  503|Caenorhabditis elegans Hypothetical
           protein ZK185.2 protein.
          Length = 503

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 12/37 (32%), Positives = 25/37 (67%)
 Frame = +2

Query: 416 FSDLTVSSVSFLILCRIKVTSPLIITEHLIRVXDVVK 526
           F + T  ++SF+++C I+VT+ L I + L+R   +++
Sbjct: 417 FHNTTPFTISFVLVCAIQVTTLLYICQILVRAMWIMR 453


>Z72508-8|CAA96640.2|  366|Caenorhabditis elegans Hypothetical
           protein F28H7.9 protein.
          Length = 366

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +1

Query: 526 VKTNCT-RVHNAYMYRVRHRMYTMCSRIQTHNHVHT 630
           + T C  R+HN+Y     H +Y++  R Q   ++ T
Sbjct: 192 IVTKCNIRLHNSYSTLEHHGLYSLSERFQVSENIKT 227


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,800,941
Number of Sequences: 27780
Number of extensions: 263277
Number of successful extensions: 501
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 501
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)