Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0049
         (637 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g21700.3 68416.m02737 expressed protein                             27   7.9  
At3g21700.2 68416.m02735 expressed protein                             27   7.9  
At3g21700.1 68416.m02736 expressed protein                             27   7.9  

>At3g21700.3 68416.m02737 expressed protein
          Length = 292

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = +1

Query: 241 VVKFSNAARRSRVNVRIVCTDTATRLVWFC*RIFXCSP 354
           +V+ +N   R+RVN RI+     TRL+W   RI  C+P
Sbjct: 8   IVRINNL--RNRVNRRILILRRFTRLLWS--RIVACTP 41


>At3g21700.2 68416.m02735 expressed protein
          Length = 248

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = +1

Query: 241 VVKFSNAARRSRVNVRIVCTDTATRLVWFC*RIFXCSP 354
           +V+ +N   R+RVN RI+     TRL+W   RI  C+P
Sbjct: 8   IVRINNL--RNRVNRRILILRRFTRLLWS--RIVACTP 41


>At3g21700.1 68416.m02736 expressed protein
          Length = 291

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = +1

Query: 241 VVKFSNAARRSRVNVRIVCTDTATRLVWFC*RIFXCSP 354
           +V+ +N   R+RVN RI+     TRL+W   RI  C+P
Sbjct: 8   IVRINNL--RNRVNRRILILRRFTRLLWS--RIVACTP 41


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,685,376
Number of Sequences: 28952
Number of extensions: 234451
Number of successful extensions: 461
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 461
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1305036432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)