Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0048
(691 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 9e-05
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.002
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.003
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.003
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 38 0.008
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.008
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.010
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 38 0.010
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 38 0.010
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 37 0.013
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 37 0.013
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.013
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 37 0.013
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.013
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.018
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 37 0.018
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 37 0.018
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.023
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.041
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 36 0.041
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.054
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.071
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.071
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 34 0.094
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.094
SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2) 34 0.094
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.094
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 33 0.17
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 33 0.17
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.22
SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 33 0.22
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_44747| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.50
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.50
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.50
SB_215| Best HMM Match : ALG3 (HMM E-Value=0.18) 31 0.67
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.88
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.88
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 31 1.2
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 30 1.5
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 30 2.0
SB_27293| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_17196| Best HMM Match : Trypsin (HMM E-Value=0.027) 28 8.2
SB_26989| Best HMM Match : Chromo (HMM E-Value=5.5e-10) 28 8.2
SB_16679| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 44.4 bits (100), Expect = 9e-05
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1
Query: 166 HAVLFGGTCGGSIISPKWILTAGHCTL 246
H G CGGS+I+P+W+LTAGHC L
Sbjct: 80 HVTPHGFVCGGSLIAPQWVLTAGHCIL 106
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 181 GGTCGGSIISPKWILTAGHCTL 246
G CGGSII P W++TAGHC +
Sbjct: 7 GHWCGGSIIDPHWVVTAGHCVV 28
Score = 35.5 bits (78), Expect = 0.041
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHC 240
CGGS+I P WILT+ HC
Sbjct: 275 CGGSLIDPYWILTSSHC 291
Score = 34.3 bits (75), Expect = 0.094
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHC 240
CGGS+I +W++T+GHC
Sbjct: 561 CGGSLIDKQWVVTSGHC 577
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +1
Query: 181 GGTCGGSIISPKWILTAGHCTLFTKVITYWPVL 279
G CGGS+++P W+LTA HC L Y VL
Sbjct: 55 GFICGGSLVAPGWVLTAAHCILSDDASKYKVVL 87
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 39.5 bits (88), Expect = 0.003
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHCTLFTK 255
CGGS+++P+WI+TA HC ++K
Sbjct: 135 CGGSVVAPEWIVTAAHCFAYSK 156
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 39.5 bits (88), Expect = 0.003
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHC 240
CGG++ISP W+LTAGHC
Sbjct: 461 CGGTLISPDWVLTAGHC 477
Score = 33.9 bits (74), Expect = 0.12
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHC 240
CGG++IS +W++TA HC
Sbjct: 872 CGGALISDRWVVTASHC 888
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 37.9 bits (84), Expect = 0.008
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHC 240
CGGS+I+P+W+LTA HC
Sbjct: 63 CGGSLITPEWVLTAAHC 79
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 37.9 bits (84), Expect = 0.008
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHC 240
CGGS+I+P+W+LTA HC
Sbjct: 106 CGGSLITPEWVLTAAHC 122
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 37.5 bits (83), Expect = 0.010
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHCTLFTKVITYWPVLTNQ 288
CGGS++SP W++TA HC + + V+T +
Sbjct: 93 CGGSLVSPTWVVTAAHCIAGSSHTPSYKVVTGE 125
Score = 36.3 bits (80), Expect = 0.023
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHC 240
CGGS+I P+W+LTA HC
Sbjct: 690 CGGSLIHPQWVLTATHC 706
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 37.5 bits (83), Expect = 0.010
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHC 240
CGGS+IS KW+LTA HC
Sbjct: 133 CGGSLISEKWVLTAAHC 149
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 37.5 bits (83), Expect = 0.010
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHCTL 246
CGGS++SP W+LTA HC +
Sbjct: 56 CGGSLLSPLWLLTAAHCVI 74
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 37.5 bits (83), Expect = 0.010
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHC 240
CGGS+I+P+WILTA HC
Sbjct: 37 CGGSLIAPQWILTATHC 53
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 157 RFPHAVLFGGTCGGSIISPKWILTAGHCTLFTKVIT 264
RF H+ CGG++I+ +W+LTA HC T IT
Sbjct: 146 RFDHSGNQMQICGGALINREWVLTAAHCFYKTNPIT 181
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 37.1 bits (82), Expect = 0.013
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHC 240
CGGS+I P+W+LTA HC
Sbjct: 286 CGGSLIHPEWVLTAAHC 302
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 37.1 bits (82), Expect = 0.013
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +1
Query: 181 GGTCGGSIISPKWILTAGHC 240
G CGG+++SP+W++TA HC
Sbjct: 374 GHHCGGTLVSPQWVVTAAHC 393
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 37.1 bits (82), Expect = 0.013
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 178 FGGTCGGSIISPKWILTAGHCTLFTKVITYWPVLTNQT 291
+G CGG++++ +W+LTA C K W V+ +T
Sbjct: 280 YGPVCGGTLLTSEWVLTAARCFRDNKRAGEWKVILGET 317
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 37.1 bits (82), Expect = 0.013
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +1
Query: 187 TCGGSIISPKWILTAGHC 240
TCGGS+IS +W++TA HC
Sbjct: 131 TCGGSLISDRWVVTAAHC 148
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +1
Query: 187 TCGGSIISPKWILTA 231
TCGGS+IS +W++TA
Sbjct: 454 TCGGSLISDRWVVTA 468
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 37.1 bits (82), Expect = 0.013
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHC 240
CGGS+I P+W+LTA HC
Sbjct: 246 CGGSLIHPEWVLTAAHC 262
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 36.7 bits (81), Expect = 0.018
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHC 240
CGG++ISP W+LTA HC
Sbjct: 574 CGGNVISPWWVLTAAHC 590
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 36.7 bits (81), Expect = 0.018
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +1
Query: 187 TCGGSIISPKWILTAGHCTL 246
+CGG++IS KW++TA HC +
Sbjct: 501 SCGGALISSKWVITAAHCVI 520
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 36.7 bits (81), Expect = 0.018
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHC 240
CGGS+I P+WILTA HC
Sbjct: 80 CGGSLIHPQWILTATHC 96
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 36.3 bits (80), Expect = 0.023
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHC 240
CGGS+I P W+LTA HC
Sbjct: 57 CGGSLIDPGWVLTAAHC 73
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 35.9 bits (79), Expect = 0.031
Identities = 11/22 (50%), Positives = 18/22 (81%), Gaps = 1/22 (4%)
Frame = +1
Query: 178 FGGT-CGGSIISPKWILTAGHC 240
+GG CGG+++ P+W++TA HC
Sbjct: 161 YGGQFCGGTLVHPQWVITAAHC 182
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 35.9 bits (79), Expect = 0.031
Identities = 9/19 (47%), Positives = 17/19 (89%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHCTL 246
CGG++++P+W++TA HC +
Sbjct: 657 CGGTLVTPEWVITAAHCVV 675
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 35.5 bits (78), Expect = 0.041
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHC 240
CGGS+I P WILT+ HC
Sbjct: 15 CGGSLIDPYWILTSSHC 31
Score = 34.3 bits (75), Expect = 0.094
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHC 240
CGGS+I +W++T+GHC
Sbjct: 276 CGGSLIDKQWVVTSGHC 292
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 35.5 bits (78), Expect = 0.041
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 181 GGTCGGSIISPKWILTAGHC 240
G CGGSI++ +WI+TA HC
Sbjct: 1806 GHICGGSIVNSQWIVTAAHC 1825
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 35.1 bits (77), Expect = 0.054
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHCTL 246
CGGS++S W+LTA HC +
Sbjct: 340 CGGSLLSSTWVLTAAHCVI 358
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 34.7 bits (76), Expect = 0.071
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHC 240
CGG+++ P+W++TA HC
Sbjct: 275 CGGTLVHPRWVVTASHC 291
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 34.7 bits (76), Expect = 0.071
Identities = 13/26 (50%), Positives = 19/26 (73%), Gaps = 2/26 (7%)
Frame = +1
Query: 169 AVLFGGT--CGGSIISPKWILTAGHC 240
A+L GT CGGS+++ W++TA HC
Sbjct: 70 ALLMNGTQFCGGSLVNENWVVTARHC 95
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 34.3 bits (75), Expect = 0.094
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHC 240
CGGS+I +W+LTA HC
Sbjct: 68 CGGSLIDSEWVLTAAHC 84
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 34.3 bits (75), Expect = 0.094
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +1
Query: 187 TCGGSIISPKWILTAGHC 240
+CGG++IS +W++TA HC
Sbjct: 55 SCGGTLISDRWVVTASHC 72
Score = 32.7 bits (71), Expect = 0.29
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 187 TCGGSIISPKWILTAGHCTL 246
TCG ++I P W +TA HC +
Sbjct: 352 TCGATLIRPGWAITAAHCVM 371
>SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2)
Length = 157
Score = 34.3 bits (75), Expect = 0.094
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHC 240
C GS+I +WI+TAGHC
Sbjct: 79 CAGSLIEARWIITAGHC 95
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 34.3 bits (75), Expect = 0.094
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHCTLF 249
CGG++I+ W+LTA HC ++
Sbjct: 1192 CGGTLIAEDWVLTAAHCVVY 1211
>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Frame = +1
Query: 169 AVLFGGT---CGGSIISPKWILTAGHC 240
A+ GT CGGS+I +W++TA HC
Sbjct: 43 ALFLNGTHHRCGGSVIKSQWVVTAAHC 69
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 33.5 bits (73), Expect = 0.17
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHCTLFTKVITYWPVL 279
CGG++I +W++TA HC ++++ V+
Sbjct: 73 CGGALIDREWVVTAAHCVFQEPDVSHYKVI 102
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 33.5 bits (73), Expect = 0.17
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHC 240
CGGS++S W++TA HC
Sbjct: 502 CGGSLVSSTWVVTAAHC 518
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 33.5 bits (73), Expect = 0.17
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHC 240
CGGS+I W+LTA HC
Sbjct: 417 CGGSLIHSNWVLTAAHC 433
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 33.1 bits (72), Expect = 0.22
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHC 240
CGGS+I+ +W++TA HC
Sbjct: 460 CGGSLINREWVVTAAHC 476
>SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Frame = +1
Query: 154 ERFP-HAVLFGGT-CGGSIISPKWILTAGHC 240
ER+P H V+ T C G+++SP+ +LTA HC
Sbjct: 154 ERYPFHTVVKLSTGCTGTLVSPRHVLTAAHC 184
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 33.1 bits (72), Expect = 0.22
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHC 240
CG S++SP W LTA HC
Sbjct: 111 CGASLLSPGWALTAAHC 127
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 32.7 bits (71), Expect = 0.29
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHC 240
CGGS+I+ W++TA HC
Sbjct: 57 CGGSLIAKDWVVTAAHC 73
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 32.7 bits (71), Expect = 0.29
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHC 240
CGG++I+ W+LTA HC
Sbjct: 1266 CGGALIAADWVLTAAHC 1282
>SB_44747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 32.3 bits (70), Expect = 0.38
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +1
Query: 160 FP-HAVLFGGTCGGSIISPKWILTAGHC 240
FP HA + C G+++SP+W++TA C
Sbjct: 41 FPWHAYIPELQCSGALVSPRWVVTAASC 68
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 31.9 bits (69), Expect = 0.50
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHC 240
CG S+++P W LTA HC
Sbjct: 266 CGASLLTPGWALTAAHC 282
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 31.9 bits (69), Expect = 0.50
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHC 240
CGGS++ WI+TA HC
Sbjct: 66 CGGSLVPEDWIVTAAHC 82
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 31.9 bits (69), Expect = 0.50
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHC 240
CGG++I +W++TA HC
Sbjct: 314 CGGTLIDTEWVVTAAHC 330
>SB_215| Best HMM Match : ALG3 (HMM E-Value=0.18)
Length = 521
Score = 31.5 bits (68), Expect = 0.67
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -2
Query: 156 FVYCFHIRLCLCNFSCYQRRFLF*IRYVIGAGLR*RARTCRQ 31
FV C R C CN +C R LF + Y I + CRQ
Sbjct: 106 FVLCTCHRACSCNVACCVRAMLFFVLYCIVLATCCLSNACRQ 147
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 31.1 bits (67), Expect = 0.88
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 112 TEITKTQSDVKAVHERFPHAVLF-GGTCGGSIISPKWILTAGHC 240
TE+ Q + +++ + A F C G ++ PK +LTA HC
Sbjct: 97 TELKGAQRESRSIRRKLRRAQRFCPWGCTGVLVGPKHVLTAAHC 140
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 31.1 bits (67), Expect = 0.88
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHC 240
CGG++I+ W++TA HC
Sbjct: 749 CGGALIARDWVVTAAHC 765
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 30.7 bits (66), Expect = 1.2
Identities = 8/17 (47%), Positives = 15/17 (88%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHC 240
CGG+++ P++++TA HC
Sbjct: 50 CGGTLVHPRFVVTASHC 66
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 30.3 bits (65), Expect = 1.5
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHC 240
CGG+++ W++TA HC
Sbjct: 240 CGGALVHEDWVVTASHC 256
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 29.9 bits (64), Expect = 2.0
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = +1
Query: 190 CGGSIISPKWILTAGHC 240
CGG+++ +W++T HC
Sbjct: 54 CGGALVHERWVVTGAHC 70
>SB_27293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 372
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +3
Query: 75 HTGFKTKICAGNN*NYKDTV*CESSTRKVSTCRS-FRWYLWRFH 203
+ G+K+ +CAG N N T C + C++ RW W H
Sbjct: 282 NVGWKSMLCAGYNDNKTQTSGCIGDSGGPLMCKAGDRWSKWVLH 325
>SB_17196| Best HMM Match : Trypsin (HMM E-Value=0.027)
Length = 379
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 121 TKTQSDVKAVHER-FPHAVLFGGTCGGSIISPKWILTAGHC 240
T+ + ++AV F V C G++IS + +LT+ HC
Sbjct: 155 TRLEIPIRAVRRTPFSSIVHISTGCTGTLISTRHVLTSAHC 195
>SB_26989| Best HMM Match : Chromo (HMM E-Value=5.5e-10)
Length = 517
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 240 HTVHEGHYVLAGTNKSDDQSGIIRYVKRMVIHP 338
HT GH +L+G ++++D SG K HP
Sbjct: 375 HTRKAGHTILSGVSRAEDASGSDVNHKENACHP 407
>SB_16679| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 527 GTDEHGGVMRKDMHAMGAINASDEY 601
GTD +G V R+DM +G + S Y
Sbjct: 104 GTDSNGNVFREDMDGVGLVPYSPRY 128
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,484,267
Number of Sequences: 59808
Number of extensions: 512068
Number of successful extensions: 1397
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 1317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1397
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1793485733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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