Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0047
         (659 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.2  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   2.2  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   2.2  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   5.1  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   9.0  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    21   9.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 283 FCLHLYQHVVITLFRLCLLTFYSTTFI 203
           F L +Y  VV   F LC+  FY    I
Sbjct: 129 FLLCIYYFVVPLFFLLCIYYFYCAFII 155



 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/30 (33%), Positives = 12/30 (40%)
 Frame = -2

Query: 283 FCLHLYQHVVITLFRLCLLTFYSTTFIK*C 194
           FC       +  LF LC+  FY    I  C
Sbjct: 268 FCCAFIIFTMHLLFLLCIYYFYCALIILLC 297


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 46  CIALTMSPPPP 14
           C +LT SPPPP
Sbjct: 323 CWSLTSSPPPP 333


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/33 (27%), Positives = 22/33 (66%)
 Frame = +3

Query: 297 PIHIFKIMIIL*QNSYAYISGKYIYKMFFNELV 395
           P+   KI++++  +++  ISG+ I  +FF +++
Sbjct: 352 PLRFGKILLLV-SSTFRTISGRTIEDLFFKKVI 383


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 571 CALVSTCALTHLKLSAIVVLGVICS 645
           C LV +  +  L L  I  LG+IC+
Sbjct: 263 CVLVQSEKIVWLHLVYISFLGIICA 287


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 158 STLWLDIPSFRLALFN 205
           ST+WL  PS+ +  FN
Sbjct: 312 STMWLKDPSWLVNAFN 327


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
 Frame = -1

Query: 566 YLLLYYIITKPNFWRR*E---KINKSYSLRAFEA 474
           +++ Y I  KP++W+  E     + +Y  R FE+
Sbjct: 90  FIMRYLIDNKPDYWKALEAKYDPDGTYKKRYFES 123


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,499
Number of Sequences: 336
Number of extensions: 3745
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)