Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0047
         (659 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ404478-1|CAC16182.1|   77|Anopheles gambiae putative GATA fact...    25   1.6  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   8.5  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    23   8.5  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   8.5  

>AJ404478-1|CAC16182.1|   77|Anopheles gambiae putative GATA factor
           protein.
          Length = 77

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 145 TPMWVHTMVGYTIIPACTI 201
           TP+W   +VG+T+  AC +
Sbjct: 6   TPLWRRDIVGHTLCNACAL 24


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 9/21 (42%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
 Frame = -3

Query: 195 ASRNDGISNHS-VDPHRCKPC 136
           AS  + ++ H+   PHRCK C
Sbjct: 168 ASLQNHVNTHTGTKPHRCKHC 188


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 129 TYYMVYTDVGPHYG 170
           TYYM+   +GP +G
Sbjct: 255 TYYMISRSLGPEFG 268


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -1

Query: 200 IVQAGMMVYPTIVWTHIGVNHVVGRITFGMSR*D 99
           IV A   V+P + W  +GV ++    + G++  D
Sbjct: 395 IVDALFPVHPPVEWPDLGVGNMAPLRSIGLTELD 428


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 719,908
Number of Sequences: 2352
Number of extensions: 15720
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)