Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0047
         (659 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80216-7|CAB02283.2|  262|Caenorhabditis elegans Hypothetical pr...    31   0.55 
AF040650-2|AAT81190.1|  939|Caenorhabditis elegans Hypothetical ...    29   3.9  
AF040650-1|AAB95011.1|  952|Caenorhabditis elegans Hypothetical ...    29   3.9  
AF040650-3|ABE73333.1|  836|Caenorhabditis elegans Hypothetical ...    28   5.1  
Z92835-6|CAB07399.1|  496|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z75526-8|CAA99773.1|  496|Caenorhabditis elegans Hypothetical pr...    28   6.8  
AF221132-1|AAF82410.1|  498|Caenorhabditis elegans diacylglycero...    28   6.8  

>Z80216-7|CAB02283.2|  262|Caenorhabditis elegans Hypothetical
           protein F10G8.7 protein.
          Length = 262

 Score = 31.5 bits (68), Expect = 0.55
 Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
 Frame = +3

Query: 15  GGGGLIV-RAIQTDHKVTWYLRGVLSKCGISPGHTECDPTYYMVYTDVGPHYGWIYHHSG 191
           G G L+V R  Q  + V  Y+R V  + G      EC PT+ +VY        + YH   
Sbjct: 47  GSGALVVNRRRQEGNPVLKYVRNVRYEWGDIGPDFECGPTFGVVY------LSFKYHKQH 100

Query: 192 LHYLMNVVE*NVRRHKRNNVI 254
             Y+   +  N     RN V+
Sbjct: 101 PEYVYTRINGNAENRYRNKVL 121


>AF040650-2|AAT81190.1|  939|Caenorhabditis elegans Hypothetical
           protein T04B8.5b protein.
          Length = 939

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +3

Query: 24  GLIVRAIQTDHKVTWYLRGVLSKCGISP-GHTECDPTYYMVYTDVGPHYG 170
           G ++  +Q        +  VLS C IS  G  E    YYM+   +GP +G
Sbjct: 101 GFLMTILQLAMAYAIVMLTVLSLCAISSNGAVEGGGVYYMISRSLGPEFG 150


>AF040650-1|AAB95011.1|  952|Caenorhabditis elegans Hypothetical
           protein T04B8.5a protein.
          Length = 952

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +3

Query: 24  GLIVRAIQTDHKVTWYLRGVLSKCGISP-GHTECDPTYYMVYTDVGPHYG 170
           G ++  +Q        +  VLS C IS  G  E    YYM+   +GP +G
Sbjct: 114 GFLMTILQLAMAYAIVMLTVLSLCAISSNGAVEGGGVYYMISRSLGPEFG 163


>AF040650-3|ABE73333.1|  836|Caenorhabditis elegans Hypothetical
           protein T04B8.5c protein.
          Length = 836

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +3

Query: 81  VLSKCGISP-GHTECDPTYYMVYTDVGPHYG 170
           VLS C IS  G  E    YYM+   +GP +G
Sbjct: 17  VLSLCAISSNGAVEGGGVYYMISRSLGPEFG 47


>Z92835-6|CAB07399.1|  496|Caenorhabditis elegans Hypothetical
           protein H19N07.4 protein.
          Length = 496

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +1

Query: 94  VESHLDIPNVILPT-TWFTPMWVHTMVGYTIIPA 192
           V +HL IP V+  T  W  P+W   M+G  +I A
Sbjct: 156 VIAHLTIPVVVTLTHKWKNPLWSVVMMGVYVIEA 189


>Z75526-8|CAA99773.1|  496|Caenorhabditis elegans Hypothetical
           protein H19N07.4 protein.
          Length = 496

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +1

Query: 94  VESHLDIPNVILPT-TWFTPMWVHTMVGYTIIPA 192
           V +HL IP V+  T  W  P+W   M+G  +I A
Sbjct: 156 VIAHLTIPVVVTLTHKWKNPLWSVVMMGVYVIEA 189


>AF221132-1|AAF82410.1|  498|Caenorhabditis elegans diacylglycerol
           acyltransferase protein.
          Length = 498

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +1

Query: 94  VESHLDIPNVILPT-TWFTPMWVHTMVGYTIIPA 192
           V +HL IP V+  T  W  P+W   M+G  +I A
Sbjct: 158 VIAHLTIPVVVTLTHKWKNPLWSVVMMGVYVIEA 191


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,417,049
Number of Sequences: 27780
Number of extensions: 325705
Number of successful extensions: 612
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 612
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)