Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0046
         (719 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1080|AAF58803.1|  593|Drosophila melanogaster CG12900-P...    29   4.8  
BT012452-1|AAS93723.1|  318|Drosophila melanogaster RE64763p pro...    29   8.4  
AY119624-1|AAM50278.1|  291|Drosophila melanogaster LP01553p pro...    29   8.4  
AE013599-3657|AAF47040.2|  331|Drosophila melanogaster CG5431-PA...    29   8.4  

>AE013599-1080|AAF58803.1|  593|Drosophila melanogaster CG12900-PA
           protein.
          Length = 593

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 16/66 (24%), Positives = 30/66 (45%)
 Frame = -1

Query: 485 NFSSWVLRDCNKGILLLAGTVRPNTIVN*GLILVWMQRFDSELY*SRFNFDSEFERYVKL 306
           +F + V  +     LLL+        +    I++W+Q   SE +  R  F +  ++++ L
Sbjct: 82  DFLALVYMESEADTLLLSALAADLNHIRDARIMIWLQMSPSENFLDRIVFQASKQKFLNL 141

Query: 305 EFIHNT 288
             I NT
Sbjct: 142 VVIENT 147


>BT012452-1|AAS93723.1|  318|Drosophila melanogaster RE64763p
           protein.
          Length = 318

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +3

Query: 420 PYSASQKKDSLVAISQDPATKIVERRRQGISVDSKYGQSTH 542
           P    + K+ ++ +S++P    V R   G+S    YG+S H
Sbjct: 130 PSKLWEGKNKVIYVSRNPLDSYVSRYYHGVSFGFNYGKSLH 170


>AY119624-1|AAM50278.1|  291|Drosophila melanogaster LP01553p
           protein.
          Length = 291

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +3

Query: 420 PYSASQKKDSLVAISQDPATKIVERRRQGISVDSKYGQSTH 542
           P    + K+ ++ +S++P    V R   G+S    YG+S H
Sbjct: 85  PSKLWEGKNKVIYVSRNPLDSYVSRYYHGVSFGFNYGKSLH 125


>AE013599-3657|AAF47040.2|  331|Drosophila melanogaster CG5431-PA
           protein.
          Length = 331

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +3

Query: 420 PYSASQKKDSLVAISQDPATKIVERRRQGISVDSKYGQSTH 542
           P    + K+ ++ +S++P    V R   G+S    YG+S H
Sbjct: 125 PSKLWEGKNKVIYVSRNPLDSYVSRYYHGVSFGFNYGKSLH 165


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,743,504
Number of Sequences: 53049
Number of extensions: 680885
Number of successful extensions: 1456
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1456
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)