Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0045
(553 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 99 6e-20
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 82 7e-15
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 79 7e-14
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 77 2e-13
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 75 1e-12
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 75 1e-12
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 75 1e-12
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 73 3e-12
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 73 4e-12
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 71 1e-11
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 71 2e-11
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 71 2e-11
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 68 1e-10
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 58 1e-07
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 58 1e-07
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 58 1e-07
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 58 1e-07
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 57 2e-07
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 57 3e-07
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 57 3e-07
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 56 4e-07
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 56 7e-07
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 55 1e-06
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 54 2e-06
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 54 2e-06
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 54 3e-06
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 53 5e-06
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 52 9e-06
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 52 1e-05
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 51 2e-05
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 49 8e-05
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 49 8e-05
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 48 1e-04
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 48 2e-04
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 47 3e-04
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 47 3e-04
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 47 3e-04
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 47 3e-04
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 46 4e-04
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 43 0.005
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 43 0.005
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 43 0.005
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 42 0.007
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 42 0.010
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 41 0.017
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 41 0.017
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 39 0.067
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 39 0.067
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 39 0.067
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 38 0.12
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 37 0.36
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 36 0.47
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 36 0.63
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 36 0.63
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 36 0.83
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 35 1.1
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 35 1.4
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 34 1.9
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 34 2.5
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 34 2.5
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 34 2.5
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 33 3.3
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 33 4.4
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 32 7.7
UniRef50_Q8ID15 Cluster: Putative uncharacterized protein MAL13P... 32 7.7
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 99.1 bits (236), Expect = 6e-20
Identities = 53/91 (58%), Positives = 60/91 (65%)
Frame = -2
Query: 276 GG*ESKSLLFIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SSPI 97
GG +LFIRGNA+SGAP++ GTNQFPNPP KA AVT+ L I S PI
Sbjct: 128 GGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSFPI 186
Query: 96 NDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 4
PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 187 KLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
Score = 63.3 bits (147), Expect = 4e-09
Identities = 31/56 (55%), Positives = 35/56 (62%)
Frame = -3
Query: 425 DEXPAKCGEKIAXSXDXPLXAILDEXGG*TVHPVPAPFSTILLEINNIXEGGRSQN 258
+E PAKC EKI S D P AI GG TVHPVP P STI L + + EGG +QN
Sbjct: 78 EETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQN 133
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 82.2 bits (194), Expect = 7e-15
Identities = 44/87 (50%), Positives = 47/87 (54%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 181
GTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 13 GTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMI 72
Query: 182 XXXXN*LVPLILGAPDIAFPRINNKDF 262
N LVPL+LGAPD+AFPR+NN F
Sbjct: 73 GGFGNWLVPLMLGAPDMAFPRMNNMSF 99
Score = 71.7 bits (168), Expect = 1e-11
Identities = 39/68 (57%), Positives = 40/68 (58%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGXSXXLAIFSPHLAGXSSXXXXXXXXXXXXXXXXXXX 483
IVENGAGTG TVYPPLSSNIAH G S LAIFS HLAG SS
Sbjct: 114 IVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNL 173
Query: 484 SFXQLPXF 507
SF Q+P F
Sbjct: 174 SFDQMPLF 181
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 79.0 bits (186), Expect = 7e-14
Identities = 38/63 (60%), Positives = 42/63 (66%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR+NN
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 254 KDF 262
F
Sbjct: 73 MSF 75
Score = 71.7 bits (168), Expect = 1e-11
Identities = 39/68 (57%), Positives = 40/68 (58%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGXSXXLAIFSPHLAGXSSXXXXXXXXXXXXXXXXXXX 483
IVENGAGTG TVYPPLSSNIAH G S LAIFS HLAG SS
Sbjct: 90 IVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRINKM 149
Query: 484 SFXQLPXF 507
SF Q+P F
Sbjct: 150 SFDQMPLF 157
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 77.4 bits (182), Expect = 2e-13
Identities = 40/87 (45%), Positives = 46/87 (52%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 181
GTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 17 GTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMI 76
Query: 182 XXXXN*LVPLILGAPDIAFPRINNKDF 262
N LVPL++GAPD+AFPR+NN F
Sbjct: 77 GGFGNWLVPLMIGAPDMAFPRMNNMSF 103
Score = 60.1 bits (139), Expect = 3e-08
Identities = 29/40 (72%), Positives = 31/40 (77%)
Frame = +1
Query: 307 VENGAGTG*TVYPPLSSNIAHRGXSXXLAIFSPHLAGXSS 426
VE GAGTG TVYPPL+ N+AH G S LAIFS HLAG SS
Sbjct: 119 VEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISS 158
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 74.9 bits (176), Expect = 1e-12
Identities = 39/87 (44%), Positives = 45/87 (51%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 181
GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 16 GTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMI 75
Query: 182 XXXXN*LVPLILGAPDIAFPRINNKDF 262
N LVPL++GAPD+AFPR+NN F
Sbjct: 76 GGFGNWLVPLMIGAPDMAFPRMNNMSF 102
Score = 58.4 bits (135), Expect = 1e-07
Identities = 28/40 (70%), Positives = 30/40 (75%)
Frame = +1
Query: 307 VENGAGTG*TVYPPLSSNIAHRGXSXXLAIFSPHLAGXSS 426
VE GAGTG TVYPPL+ N+AH G S L IFS HLAG SS
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSS 157
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 74.9 bits (176), Expect = 1e-12
Identities = 39/87 (44%), Positives = 45/87 (51%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 181
GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 16 GTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPILI 75
Query: 182 XXXXN*LVPLILGAPDIAFPRINNKDF 262
N LVPL++GAPD+AFPR+NN F
Sbjct: 76 GGFGNWLVPLMIGAPDMAFPRMNNMSF 102
Score = 58.4 bits (135), Expect = 1e-07
Identities = 28/40 (70%), Positives = 30/40 (75%)
Frame = +1
Query: 307 VENGAGTG*TVYPPLSSNIAHRGXSXXLAIFSPHLAGXSS 426
VE GAGTG TVYPPL+ N+AH G S L IFS HLAG SS
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSS 157
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 74.5 bits (175), Expect = 1e-12
Identities = 38/87 (43%), Positives = 45/87 (51%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 181
GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 5 GTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMI 64
Query: 182 XXXXN*LVPLILGAPDIAFPRINNKDF 262
N L+PL++GAPD+AFPR+NN F
Sbjct: 65 GGFGNWLIPLMIGAPDMAFPRMNNMSF 91
Score = 58.0 bits (134), Expect = 1e-07
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = +1
Query: 307 VENGAGTG*TVYPPLSSNIAHRGXSXXLAIFSPHLAGXSS 426
+E GAGTG TVYPPL+ N+AH G S L IFS HLAG SS
Sbjct: 107 IEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISS 146
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 73.3 bits (172), Expect = 3e-12
Identities = 38/87 (43%), Positives = 45/87 (51%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 181
GTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 16 GTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMI 75
Query: 182 XXXXN*LVPLILGAPDIAFPRINNKDF 262
N LVPL++GAPD+AFPR+NN F
Sbjct: 76 GGFGNWLVPLMIGAPDMAFPRMNNMSF 102
Score = 56.0 bits (129), Expect = 5e-07
Identities = 27/41 (65%), Positives = 30/41 (73%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGXSXXLAIFSPHLAGXSS 426
+VE GAGTG TVYPPL+ N +H G S L IFS HLAG SS
Sbjct: 117 MVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSS 157
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 72.9 bits (171), Expect = 4e-12
Identities = 34/63 (53%), Positives = 40/63 (63%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR+NN
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 254 KDF 262
F
Sbjct: 83 MSF 85
Score = 61.3 bits (142), Expect = 1e-08
Identities = 30/40 (75%), Positives = 31/40 (77%)
Frame = +1
Query: 307 VENGAGTG*TVYPPLSSNIAHRGXSXXLAIFSPHLAGXSS 426
VE+GAGTG TVYPPLS N AH G S LAIFS HLAG SS
Sbjct: 101 VESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSS 140
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 71.3 bits (167), Expect = 1e-11
Identities = 33/63 (52%), Positives = 39/63 (61%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR+NN
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 254 KDF 262
F
Sbjct: 84 MSF 86
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 70.9 bits (166), Expect = 2e-11
Identities = 36/64 (56%), Positives = 42/64 (65%)
Frame = +2
Query: 71 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
AELG PG+L+GDDQ N IVTAHA N LVPL++GAPD+AFPR+N
Sbjct: 40 AELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAFPRMN 99
Query: 251 NKDF 262
N F
Sbjct: 100 NMSF 103
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 70.9 bits (166), Expect = 2e-11
Identities = 33/63 (52%), Positives = 42/63 (66%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR+NN
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRMNN 83
Query: 254 KDF 262
F
Sbjct: 84 MSF 86
Score = 48.8 bits (111), Expect = 8e-05
Identities = 24/37 (64%), Positives = 25/37 (67%)
Frame = +1
Query: 316 GAGTG*TVYPPLSSNIAHRGXSXXLAIFSPHLAGXSS 426
G GTG TVYPPLS + H G S L IFS HLAG SS
Sbjct: 105 GVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASS 141
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 68.1 bits (159), Expect = 1e-10
Identities = 31/63 (49%), Positives = 39/63 (61%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
EL +PGS++GDD +YN IVTAHA N VPL++GAPD+AFPR+NN
Sbjct: 41 ELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTMIGGFGNWFVPLMIGAPDMAFPRLNN 100
Query: 254 KDF 262
F
Sbjct: 101 ISF 103
Score = 56.8 bits (131), Expect = 3e-07
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGXSXXLAIFSPHLAGXSS 426
+VE GAGTG TVYPPL+S AH G S +AIFS HLAG SS
Sbjct: 118 LVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAGLSS 158
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 58.0 bits (134), Expect = 1e-07
Identities = 34/89 (38%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 175
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 176 XXXXXXN*LVPLILGAPDIAFPRINNKDF 262
N LVP+++GAPD+AFPR+NN F
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISF 102
Score = 54.0 bits (124), Expect = 2e-06
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = +1
Query: 307 VENGAGTG*TVYPPLSSNIAHRGXSXXLAIFSPHLAGXSS 426
VE GAGTG TVYPPLS +H G S LAIFS HL+G SS
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISS 157
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 58.0 bits (134), Expect = 1e-07
Identities = 34/89 (38%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 175
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 176 XXXXXXN*LVPLILGAPDIAFPRINNKDF 262
N LVP+++GAPD+AFPR+NN F
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISF 102
Score = 54.0 bits (124), Expect = 2e-06
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = +1
Query: 307 VENGAGTG*TVYPPLSSNIAHRGXSXXLAIFSPHLAGXSS 426
VE GAGTG TVYPPLS +H G S LAIFS HL+G SS
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISS 157
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 58.0 bits (134), Expect = 1e-07
Identities = 34/89 (38%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 175
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 176 XXXXXXN*LVPLILGAPDIAFPRINNKDF 262
N LVP+++GAPD+AFPR+NN F
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISF 102
Score = 54.0 bits (124), Expect = 2e-06
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = +1
Query: 307 VENGAGTG*TVYPPLSSNIAHRGXSXXLAIFSPHLAGXSS 426
VE GAGTG TVYPPLS +H G S LAIFS HL+G SS
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISS 157
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 58.0 bits (134), Expect = 1e-07
Identities = 34/89 (38%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 175
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 176 XXXXXXN*LVPLILGAPDIAFPRINNKDF 262
N LVP+++GAPD+AFPR+NN F
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISF 102
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 57.2 bits (132), Expect = 2e-07
Identities = 28/40 (70%), Positives = 30/40 (75%)
Frame = +1
Query: 307 VENGAGTG*TVYPPLSSNIAHRGXSXXLAIFSPHLAGXSS 426
VE GAGTG TV PPLS+NIAH G S LAIFS H+AG S
Sbjct: 37 VEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXS 76
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 56.8 bits (131), Expect = 3e-07
Identities = 31/88 (35%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXX 178
GTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 44 GTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVMPAL 103
Query: 179 XXXXXN*LVPLILGAPDIAFPRINNKDF 262
N L+PL++G PD+AFPR+NN F
Sbjct: 104 IGGFGNFLMPLMIGGPDMAFPRLNNISF 131
Score = 44.4 bits (100), Expect = 0.002
Identities = 24/45 (53%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
Frame = +1
Query: 304 IVENGAGTG*TV----YPPLSSNIAHRGXSXXLAIFSPHLAGXSS 426
I+E G GTG T+ YPPLS +H G S LAIF+ HL+G SS
Sbjct: 146 IIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFALHLSGVSS 190
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 56.8 bits (131), Expect = 3e-07
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 175
GTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 22 GTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVMPV 81
Query: 176 XXXXXXN*LVPLILGAPDIAFPRINNKDF 262
N LVP+++G+PD+AFPR+NN F
Sbjct: 82 MIGGFGNWLVPIMIGSPDMAFPRLNNISF 110
Score = 51.6 bits (118), Expect = 1e-05
Identities = 25/41 (60%), Positives = 30/41 (73%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGXSXXLAIFSPHLAGXSS 426
+VE G GTG TVYPPLSS +H G + LAIFS H++G SS
Sbjct: 125 LVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISGASS 165
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 56.4 bits (130), Expect = 4e-07
Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXX 175
GTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 17 GTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPA 76
Query: 176 XXXXXXN*LVPLILGAPDIAFPRINNKDF 262
N VP+++GAPD+AFPR+NN F
Sbjct: 77 MIGGFGNWFVPILIGAPDMAFPRLNNISF 105
Score = 52.0 bits (119), Expect = 9e-06
Identities = 25/41 (60%), Positives = 30/41 (73%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGXSXXLAIFSPHLAGXSS 426
+VE G+GTG TVYPPLS +H G + LAIFS HL+G SS
Sbjct: 120 LVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSS 160
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 55.6 bits (128), Expect = 7e-07
Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXX 175
GTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 18 GTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPA 77
Query: 176 XXXXXXN*LVPLILGAPDIAFPRINNKDF 262
N VP+++G+PD+AFPR+NN F
Sbjct: 78 MIGGFGNWFVPILIGSPDMAFPRLNNISF 106
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 55.2 bits (127), Expect = 1e-06
Identities = 28/41 (68%), Positives = 30/41 (73%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGXSXXLAIFSPHLAGXSS 426
+VE+GAGTG TVYPPLSS AH G S LAIFS HL SS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISS 158
Score = 45.6 bits (103), Expect = 8e-04
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 74 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 247
EL PGS L G+ Q++N +V HA N ++PL++GA D++FPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDMSFPRI 98
Query: 248 NNKDF 262
N+ F
Sbjct: 99 NSIGF 103
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 54.0 bits (124), Expect = 2e-06
Identities = 27/41 (65%), Positives = 30/41 (73%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGXSXXLAIFSPHLAGXSS 426
+VE+GAGTG TVYPPLSS AH G S LAIF+ HL SS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISS 158
Score = 48.4 bits (110), Expect = 1e-04
Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 74 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 247
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
Query: 248 NNKDF 262
NN F
Sbjct: 99 NNIAF 103
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 54.0 bits (124), Expect = 2e-06
Identities = 27/41 (65%), Positives = 30/41 (73%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGXSXXLAIFSPHLAGXSS 426
+VE+GAGTG TVYPPLSS AH G S LAIF+ HL SS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISS 158
Score = 48.4 bits (110), Expect = 1e-04
Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 74 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 247
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
Query: 248 NNKDF 262
NN F
Sbjct: 99 NNIAF 103
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 53.6 bits (123), Expect = 3e-06
Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +2
Query: 74 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
EL PG I D+Q+YN+I+TAHA N L+PL LG PD+ FPR+N
Sbjct: 40 ELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMPALIGGFGNFLLPLGLGGPDMGFPRLN 99
Query: 251 N 253
N
Sbjct: 100 N 100
Score = 51.6 bits (118), Expect = 1e-05
Identities = 24/40 (60%), Positives = 28/40 (70%)
Frame = +1
Query: 307 VENGAGTG*TVYPPLSSNIAHRGXSXXLAIFSPHLAGXSS 426
+ENG GTG T+YPPLS +H G S LAIF HL+G SS
Sbjct: 119 IENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGISS 158
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 52.8 bits (121), Expect = 5e-06
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +2
Query: 74 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
EL PG I D+Q+YN+I+T+H N L+P+++G PD+AFPR+N
Sbjct: 66 ELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGGPDMAFPRLN 125
Query: 251 NKDF 262
N +
Sbjct: 126 NVSY 129
Score = 47.6 bits (108), Expect = 2e-04
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGXSXXLAIFSPHLAGXSS 426
I+ENG GTG T+YPPLS +H L IF HL+G SS
Sbjct: 144 IIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGISS 184
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 52.0 bits (119), Expect = 9e-06
Identities = 25/41 (60%), Positives = 30/41 (73%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGXSXXLAIFSPHLAGXSS 426
+VE+GAGTG TVYPPL+S AH G S LAIF+ H+ SS
Sbjct: 118 LVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTSISS 158
Score = 46.8 bits (106), Expect = 3e-04
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 74 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 247
EL PG L G++Q++N +V HA N ++PL++GA D AFPRI
Sbjct: 39 ELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYMLPLMIGATDTAFPRI 98
Query: 248 NNKDF 262
NN F
Sbjct: 99 NNIGF 103
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 51.6 bits (118), Expect = 1e-05
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGXSXXLAIFSPHLAGXSS 426
+VE G G G TVYPPL+S + H G S AIFS HLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGXSXXLAIFS 402
+VENGAGTG TVYPPLSS AH G S LAI+S
Sbjct: 33 MVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 33.5 bits (73), Expect = 3.3
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +2
Query: 209 LILGAPDIAFPRINNKDF 262
L+LGAPD+AFPR+NN F
Sbjct: 1 LMLGAPDMAFPRMNNMSF 18
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 48.8 bits (111), Expect = 8e-05
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 74 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 247
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
Query: 248 NNKDF 262
NN F
Sbjct: 104 NNISF 108
Score = 47.2 bits (107), Expect = 3e-04
Identities = 24/41 (58%), Positives = 29/41 (70%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGXSXXLAIFSPHLAGXSS 426
+VE GAGTG TVY PL+ +H G + LAIFS HL+G SS
Sbjct: 123 LVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSS 163
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 48.8 bits (111), Expect = 8e-05
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 74 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 247
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
Query: 248 NNKDF 262
NN F
Sbjct: 104 NNISF 108
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 48.4 bits (110), Expect = 1e-04
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 74 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 247
EL +PG G Q+YN+++T H N ++PL+LGAP++AFPR+
Sbjct: 49 ELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAPEMAFPRV 108
Query: 248 NNKDF 262
N F
Sbjct: 109 NALSF 113
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 47.6 bits (108), Expect = 2e-04
Identities = 24/39 (61%), Positives = 25/39 (64%)
Frame = +1
Query: 310 ENGAGTG*TVYPPLSSNIAHRGXSXXLAIFSPHLAGXSS 426
E G GTG TVYPPLSS +H G S L IFS HL G S
Sbjct: 123 EGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGS 161
Score = 46.8 bits (106), Expect = 3e-04
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +2
Query: 74 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 247
EL PG L G+ YN I T H N VP+++GAPD++FPR+
Sbjct: 42 ELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAPDMSFPRL 101
Query: 248 NNKDF 262
NN F
Sbjct: 102 NNFSF 106
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 46.8 bits (106), Expect = 3e-04
Identities = 24/60 (40%), Positives = 32/60 (53%)
Frame = +2
Query: 83 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNKDF 262
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Score = 46.8 bits (106), Expect = 3e-04
Identities = 20/41 (48%), Positives = 30/41 (73%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGXSXXLAIFSPHLAGXSS 426
+++ G G+G T+YPPL+S +H G S +AIF+ HL+G SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSS 175
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 46.8 bits (106), Expect = 3e-04
Identities = 24/60 (40%), Positives = 32/60 (53%)
Frame = +2
Query: 83 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNKDF 262
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Score = 46.8 bits (106), Expect = 3e-04
Identities = 20/41 (48%), Positives = 30/41 (73%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGXSXXLAIFSPHLAGXSS 426
+++ G G+G T+YPPL+S +H G S +AIF+ HL+G SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSS 175
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 46.8 bits (106), Expect = 3e-04
Identities = 24/60 (40%), Positives = 32/60 (53%)
Frame = +2
Query: 83 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNKDF 262
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Score = 46.8 bits (106), Expect = 3e-04
Identities = 20/41 (48%), Positives = 30/41 (73%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGXSXXLAIFSPHLAGXSS 426
+++ G G+G T+YPPL+S +H G S +AIF+ HL+G SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSS 175
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 46.8 bits (106), Expect = 3e-04
Identities = 24/60 (40%), Positives = 32/60 (53%)
Frame = +2
Query: 83 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNKDF 262
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Score = 46.8 bits (106), Expect = 3e-04
Identities = 20/41 (48%), Positives = 30/41 (73%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGXSXXLAIFSPHLAGXSS 426
+++ G G+G T+YPPL+S +H G S +AIF+ HL+G SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSS 175
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 46.4 bits (105), Expect = 4e-04
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +2
Query: 89 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNKDF 262
G L GD Q YN ++T+H N +P++ G PD+ FPR+NN F
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSF 105
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 42.7 bits (96), Expect = 0.005
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 71 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 244
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 245 INNKDF 262
+NN +
Sbjct: 203 LNNLSY 208
Score = 37.9 bits (84), Expect = 0.15
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGXSXXLAIFSPHLAGXSS 426
+++ GAG G T YPP+S+ + AIF+ H++G SS
Sbjct: 223 MIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGASS 263
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 42.7 bits (96), Expect = 0.005
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 74 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 247
EL PG+ L G+ Q++N +V HA N L+PL++GA D++F R+
Sbjct: 39 ELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGASDMSFARL 98
Query: 248 NNKDF 262
NN F
Sbjct: 99 NNISF 103
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 42.7 bits (96), Expect = 0.005
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
EL +PG + + YN+++T+H N L+PL++GA D+AFPRIN
Sbjct: 122 ELADPGMTVISNTFYNSLLTSHGITMLFLFATPIIAAFS-NYLIPLLIGADDMAFPRIN 179
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 42.3 bits (95), Expect = 0.007
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +2
Query: 113 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNKDF 262
++N ++TAH N VP+++GAPD+AFPR+NN F
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISF 142
Score = 40.3 bits (90), Expect = 0.029
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = +1
Query: 313 NGAGTG*TVYPPLSSNIAHRGXSXXLAIFSPHLAGXSS 426
NGAGTG TVY PLS++ G + +AI S H+AG SS
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASS 200
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 41.9 bits (94), Expect = 0.010
Identities = 22/59 (37%), Positives = 27/59 (45%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
EL PG I D YN T H N ++PL+LGA D+AFPR+N
Sbjct: 70 ELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFPRLN 128
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 41.1 bits (92), Expect = 0.017
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +2
Query: 86 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
PG + D + YN ++T H N L+PL++GA D+AFPR+N
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLN 56
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 41.1 bits (92), Expect = 0.017
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
EL PG I D YN + T H N L+P+++GA D+AFP++N
Sbjct: 63 ELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPKLNL 122
Query: 254 KDF 262
F
Sbjct: 123 LSF 125
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 39.1 bits (87), Expect = 0.067
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 74 ELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
EL G I DD +YNT + H N +PL++GA D+AFPR+N
Sbjct: 42 ELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKDVAFPRVN 101
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 39.1 bits (87), Expect = 0.067
Identities = 19/37 (51%), Positives = 21/37 (56%)
Frame = +1
Query: 316 GAGTG*TVYPPLSSNIAHRGXSXXLAIFSPHLAGXSS 426
G G VYPP SS +AH + L IF HLAG SS
Sbjct: 111 GVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISS 147
Score = 33.1 bits (72), Expect = 4.4
Identities = 22/62 (35%), Positives = 26/62 (41%)
Frame = +2
Query: 77 LGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNK 256
L G +IG QI VTA A L PL +GAP +A PR+ N
Sbjct: 31 LSXXGQVIGXGQIXXVGVTAXALVMIFFFVMPTLXGGFGXXLXPLXVGAPXMAXPRLXNM 90
Query: 257 DF 262
F
Sbjct: 91 SF 92
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 39.1 bits (87), Expect = 0.067
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +1
Query: 316 GAGTG*TVYPPLSSNIAHRGXSXXLAIFSPHLAGXSS 426
G G G T+YPPLS++ G LA+FS H+AG SS
Sbjct: 123 GLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSS 159
Score = 36.3 bits (80), Expect = 0.47
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
EL +PG + +Y++I+T HA N +PL++ D++ PR+NN
Sbjct: 42 ELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPTSIGGLGNWFIPLMIKIKDLSMPRLNN 101
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 38.3 bits (85), Expect = 0.12
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +1
Query: 346 PLSSNIAHRGXSXXLAIFSPHLAGXSS 426
PL+S+IAH G S +AIFS HLAG SS
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSS 98
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 36.7 bits (81), Expect = 0.36
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
EL P + + D +YN + T H N L+P ++GAPD+AFP++N
Sbjct: 64 ELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPKLNA 122
Query: 254 KDF 262
F
Sbjct: 123 AAF 125
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 36.3 bits (80), Expect = 0.47
Identities = 22/64 (34%), Positives = 28/64 (43%)
Frame = +2
Query: 71 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
A+L P + D YN I T H N +VPL +GA D+AFP +N
Sbjct: 80 AQLALPNNSFLDSNHYNEIFTTHGTIMIIFMAMPFLIGLI-NVVVPLQIGARDVAFPYLN 138
Query: 251 NKDF 262
N F
Sbjct: 139 NLSF 142
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 35.9 bits (79), Expect = 0.63
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +2
Query: 71 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
AEL PG ++ +N + T H N ++PL +GAPD+AFPR+N
Sbjct: 65 AELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIGAPDVAFPRLN 123
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 35.9 bits (79), Expect = 0.63
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
+L P + + YN I+T H N +VPL+LGA D+A PR+N
Sbjct: 52 QLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVALPRVN 110
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 35.5 bits (78), Expect = 0.83
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 74 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 247
EL +P S GD Y +VTAH N L+P +G+ D+A+PR+
Sbjct: 88 ELAHPESPFFKGDSLRYLQVVTAHGLIMVFFVVVPILFGGFANFLIPYHVGSKDVAYPRL 147
Query: 248 NNKDF 262
N+ F
Sbjct: 148 NSIGF 152
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 35.1 bits (77), Expect = 1.1
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 110 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
+ Y +VT HA N L+PL++GA D+AFP +N
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLN 132
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 34.7 bits (76), Expect = 1.4
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
+LG P + +YN + T H N +VPL++GA D+AFPR+N
Sbjct: 59 QLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLMPLNVGLG-NYMVPLMIGARDMAFPRLN 116
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 34.3 bits (75), Expect = 1.9
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +2
Query: 116 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNKDF 262
Y I T H N L+PL++GA D+AFPR+N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSF 134
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 33.9 bits (74), Expect = 2.5
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
+L PG + + +N + T HA N +PL++GA D+AFPR+N
Sbjct: 57 QLARPGLEVVTARTFNALFTMHATTMIFLGVMPLLSAFM-NYFLPLMIGARDVAFPRLN 114
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 33.9 bits (74), Expect = 2.5
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 110 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
+ Y + T HA N L+PL++GA D+AFP++N
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLN 136
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 33.9 bits (74), Expect = 2.5
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
EL P ++YN ++T H N L+PL++G D+AFPR+N
Sbjct: 55 ELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVGTEDMAFPRLN 112
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 33.5 bits (73), Expect = 3.3
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 113 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
+YN I T H N +P++ G+P++A+PRIN+
Sbjct: 58 LYNMIFTIHGIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPRINS 104
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 33.1 bits (72), Expect = 4.4
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
+L P + +++N + T H N VPL++GA D+AFPR+N+
Sbjct: 60 QLAFPNNTFLSPEMFNQLFTMHGTTMVFLVGMPVLTGFA-NYFVPLMIGARDVAFPRLNS 118
Query: 254 KDF 262
F
Sbjct: 119 FGF 121
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 32.3 bits (70), Expect = 7.7
Identities = 19/63 (30%), Positives = 24/63 (38%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
+L P L D +YN VT H N L+P PD+ FPR+N
Sbjct: 37 QLAFPSILTSD--VYNAFVTLHGLVMVFFAAMPTAIGFFANLLIPYHCNLPDLLFPRMNA 94
Query: 254 KDF 262
F
Sbjct: 95 LSF 97
>UniRef50_Q8ID15 Cluster: Putative uncharacterized protein
MAL13P1.352; n=2; Plasmodium|Rep: Putative
uncharacterized protein MAL13P1.352 - Plasmodium
falciparum (isolate 3D7)
Length = 1106
Score = 32.3 bits (70), Expect = 7.7
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 270 TPLPYIINFKKNCRKWCRN 326
T L Y + KK+CRKWCRN
Sbjct: 697 TKLMYCVIKKKHCRKWCRN 715
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 316,470,059
Number of Sequences: 1657284
Number of extensions: 4087663
Number of successful extensions: 7411
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 7186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7381
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36238783989
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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