Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0044
(653 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 101 2e-20
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 101 2e-20
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 100 3e-20
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 80 4e-14
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 79 9e-14
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 78 2e-13
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 78 2e-13
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 78 2e-13
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 77 3e-13
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 77 3e-13
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 75 1e-12
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 75 1e-12
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 75 2e-12
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 75 2e-12
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 74 3e-12
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 72 1e-11
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 71 2e-11
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 71 2e-11
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 67 3e-10
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 67 3e-10
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 66 5e-10
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 66 9e-10
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 64 2e-09
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 64 4e-09
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 62 1e-08
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 61 3e-08
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 60 6e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 8e-08
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 59 1e-07
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 58 2e-07
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 58 2e-07
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 58 2e-07
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 58 2e-07
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 58 2e-07
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 57 3e-07
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 56 7e-07
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 55 1e-06
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 50 4e-05
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 50 4e-05
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 49 9e-05
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 48 1e-04
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 48 1e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 2e-04
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 47 3e-04
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 47 5e-04
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 47 5e-04
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 45 0.001
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 42 0.013
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 42 0.013
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 41 0.023
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 41 0.030
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 39 0.091
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 39 0.091
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 37 0.49
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 37 0.49
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 37 0.49
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 36 0.64
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 36 0.64
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 36 0.85
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 36 0.85
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 36 1.1
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 35 1.5
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 35 2.0
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 34 2.6
UniRef50_A2Q7J2 Cluster: Contig An01c0050, complete genome; n=1;... 34 2.6
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 34 3.4
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 34 3.4
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 34 3.4
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 33 4.5
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 33 6.0
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 101 bits (241), Expect = 2e-20
Identities = 60/116 (51%), Positives = 61/116 (52%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 483
IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 114 IVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNL 173
Query: 484 SFDQLPLFDEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQ 651
SFDQ+PLF G FFDPAGGGDPILYQ
Sbjct: 174 SFDQMPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQ 229
Score = 86.2 bits (204), Expect = 6e-16
Identities = 47/94 (50%), Positives = 50/94 (53%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 181
GTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 13 GTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMI 72
Query: 182 XXXXN*LVPLILGAPDIAFPRINNKDFDSYPPPL 283
N LVPL+LGAPD+AFPR+NN F PP L
Sbjct: 73 GGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSL 106
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/34 (70%), Positives = 25/34 (73%)
Frame = +3
Query: 513 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 614
AVGITAF AGAIT+LLTDRNLNTSFF
Sbjct: 184 AVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFF 217
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 101 bits (241), Expect = 2e-20
Identities = 60/116 (51%), Positives = 61/116 (52%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 483
IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 90 IVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRINKM 149
Query: 484 SFDQLPLFDEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQ 651
SFDQ+PLF G FFDPAGGGDPILYQ
Sbjct: 150 SFDQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQ 205
Score = 83.0 bits (196), Expect = 6e-15
Identities = 41/70 (58%), Positives = 45/70 (64%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR+NN
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 254 KDFDSYPPPL 283
F PP L
Sbjct: 73 MSFWLLPPSL 82
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/34 (67%), Positives = 24/34 (70%)
Frame = +3
Query: 513 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 614
AVGITA AGAIT+LLTDRNLNTSFF
Sbjct: 160 AVGITALLLLLSLPVLAGAITMLLTDRNLNTSFF 193
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 100 bits (239), Expect = 3e-20
Identities = 54/93 (58%), Positives = 61/93 (65%)
Frame = -3
Query: 282 KGGG*ESKSLLFIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SS 103
K GG +LFIRGNA+SGAP++ GTNQFPNPP KA AVT+ L I S
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 102 PINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 4
PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 185 PIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
Score = 74.5 bits (175), Expect = 2e-12
Identities = 54/136 (39%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Frame = -1
Query: 647 YKIGSPPPAGSKK*CI*------VSIC**YCNSSS*NR******KCCNPYSSSNKGN*SN 486
+ IGSPPPAGSKK + I S S ++ + +N G S
Sbjct: 4 WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSK------MAVSNTDQTNSGMRSM 57
Query: 485 DILFNRXXXXXXXXXXXXXIDEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFST 306
I +R I+E PAKC+EKI STD P CAI SGG TVHPVP P ST
Sbjct: 58 VIPADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLST 117
Query: 305 ILLEINNIREGGRSQN 258
I L + ++EGG +QN
Sbjct: 118 IPLNKSKVKEGGSNQN 133
Score = 46.8 bits (106), Expect = 5e-04
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = -2
Query: 613 KNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPT 515
K +VFKFRSV +IVIAPA TGS++N+K AV T
Sbjct: 15 KKEVFKFRSVKSIVIAPASTGSESNSKMAVSNT 47
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 80.2 bits (189), Expect = 4e-14
Identities = 42/92 (45%), Positives = 48/92 (52%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 181
GTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 17 GTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMI 76
Query: 182 XXXXN*LVPLILGAPDIAFPRINNKDFDSYPP 277
N LVPL++GAPD+AFPR+NN F PP
Sbjct: 77 GGFGNWLVPLMIGAPDMAFPRMNNMSFWLXPP 108
Score = 79.8 bits (188), Expect = 5e-14
Identities = 52/115 (45%), Positives = 54/115 (46%)
Frame = +1
Query: 307 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 486
VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAGISS S
Sbjct: 119 VEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAIS 178
Query: 487 FDQLPLFDEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQ 651
Q PLF FFDPAGGGDPILYQ
Sbjct: 179 QYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQ 233
Score = 34.7 bits (76), Expect = 2.0
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +3
Query: 513 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 614
+V ITA A IT+LLTDRNLNT+FF
Sbjct: 188 SVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFF 221
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 79.0 bits (186), Expect = 9e-14
Identities = 51/118 (43%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Frame = +1
Query: 307 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 486
VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG+ S +
Sbjct: 37 VEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXSILGAINFISTVLNMRPSGMT 96
Query: 487 FDQLPLF---DEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQ 651
++PLF E+ I T FFDPAGGGDPILYQ
Sbjct: 97 PXRMPLFVWAVEITAILLLLSLPVLAGAITMLLTDRNINT---SFFDPAGGGDPILYQ 151
Score = 41.5 bits (93), Expect = 0.017
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +3
Query: 513 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 614
AV ITA AGAIT+LLTDRN+NTSFF
Sbjct: 106 AVEITAILLLLSLPVLAGAITMLLTDRNINTSFF 139
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 78.2 bits (184), Expect = 2e-13
Identities = 50/115 (43%), Positives = 53/115 (46%)
Frame = +1
Query: 307 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 486
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS S
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTIS 177
Query: 487 FDQLPLFDEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQ 651
Q PLF FFDPAGGGDPILYQ
Sbjct: 178 QYQTPLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQ 232
Score = 77.8 bits (183), Expect = 2e-13
Identities = 41/92 (44%), Positives = 47/92 (51%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 181
GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 16 GTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPILI 75
Query: 182 XXXXN*LVPLILGAPDIAFPRINNKDFDSYPP 277
N LVPL++GAPD+AFPR+NN F PP
Sbjct: 76 GGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPP 107
Score = 35.5 bits (78), Expect = 1.1
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +3
Query: 513 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 614
AV +TA A IT+LLTDRNLNT+FF
Sbjct: 187 AVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFF 220
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 77.8 bits (183), Expect = 2e-13
Identities = 41/92 (44%), Positives = 47/92 (51%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 181
GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 16 GTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMI 75
Query: 182 XXXXN*LVPLILGAPDIAFPRINNKDFDSYPP 277
N LVPL++GAPD+AFPR+NN F PP
Sbjct: 76 GGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPP 107
Score = 76.6 bits (180), Expect = 5e-13
Identities = 49/115 (42%), Positives = 53/115 (46%)
Frame = +1
Query: 307 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 486
VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS +
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAIT 177
Query: 487 FDQLPLFDEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQ 651
Q PLF FFDPAGGGDPILYQ
Sbjct: 178 QYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQ 232
Score = 34.3 bits (75), Expect = 2.6
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +3
Query: 513 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 614
+V +TA A IT+LLTDRNLNT+FF
Sbjct: 187 SVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFF 220
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 77.8 bits (183), Expect = 2e-13
Identities = 49/115 (42%), Positives = 53/115 (46%)
Frame = +1
Query: 307 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 486
VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SS
Sbjct: 101 VESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSSILGAVNFITTVINMRWGAMK 160
Query: 487 FDQLPLFDEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQ 651
+ + LF FFDPAGGGDPILYQ
Sbjct: 161 IELVSLFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQ 215
Score = 77.0 bits (181), Expect = 4e-13
Identities = 37/70 (52%), Positives = 43/70 (61%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR+NN
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 254 KDFDSYPPPL 283
F PP L
Sbjct: 83 MSFWFLPPSL 92
Score = 39.5 bits (88), Expect = 0.069
Identities = 20/34 (58%), Positives = 22/34 (64%)
Frame = +3
Query: 513 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 614
+V ITA AGAIT+LLTDRN NTSFF
Sbjct: 170 SVKITAILLLLSLPVLAGAITMLLTDRNFNTSFF 203
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 77.4 bits (182), Expect = 3e-13
Identities = 40/92 (43%), Positives = 47/92 (51%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 181
GTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 5 GTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMI 64
Query: 182 XXXXN*LVPLILGAPDIAFPRINNKDFDSYPP 277
N L+PL++GAPD+AFPR+NN F PP
Sbjct: 65 GGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPP 96
Score = 67.7 bits (158), Expect = 2e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +1
Query: 307 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 426
+E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAGISS
Sbjct: 107 IEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISS 146
Score = 35.9 bits (79), Expect = 0.85
Identities = 19/34 (55%), Positives = 21/34 (61%)
Frame = +3
Query: 513 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 614
AV ITA A IT+LLTDRNLNT+FF
Sbjct: 176 AVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFF 209
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 77.4 bits (182), Expect = 3e-13
Identities = 41/94 (43%), Positives = 48/94 (51%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXX 181
GTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 16 GTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMI 75
Query: 182 XXXXN*LVPLILGAPDIAFPRINNKDFDSYPPPL 283
N LVPL++GAPD+AFPR+NN F PP L
Sbjct: 76 GGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSL 109
Score = 74.1 bits (174), Expect = 3e-12
Identities = 48/116 (41%), Positives = 53/116 (45%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 483
+VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG+SS
Sbjct: 117 MVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAM 176
Query: 484 SFDQLPLFDEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQ 651
+ Q PLF FFDPAGGGDPILYQ
Sbjct: 177 TQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQ 232
Score = 34.7 bits (76), Expect = 2.0
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +3
Query: 513 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 614
+V ITA A IT+LLTDRNLNT+FF
Sbjct: 187 SVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFF 220
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 75.4 bits (177), Expect = 1e-12
Identities = 48/116 (41%), Positives = 55/116 (47%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 483
+VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG+SS
Sbjct: 118 LVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGM 177
Query: 484 SFDQLPLFDEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQ 651
+ ++PLF FFDPAGGGDPILYQ
Sbjct: 178 TMSRIPLFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQ 233
Score = 73.3 bits (172), Expect = 5e-12
Identities = 34/71 (47%), Positives = 43/71 (60%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
EL +PGS++GDD +YN IVTAHA N VPL++GAPD+AFPR+NN
Sbjct: 41 ELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTMIGGFGNWFVPLMIGAPDMAFPRLNN 100
Query: 254 KDFDSYPPPLY 286
F PP L+
Sbjct: 101 ISFWLLPPALF 111
Score = 34.3 bits (75), Expect = 2.6
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +3
Query: 513 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 614
+V ITA AGAIT+LLTDR NT+FF
Sbjct: 188 SVLITAILLLLSLPVLAGAITMLLTDRYFNTTFF 221
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 74.9 bits (176), Expect = 1e-12
Identities = 35/72 (48%), Positives = 43/72 (59%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR+NN
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 254 KDFDSYPPPLYY 289
F +P +Y
Sbjct: 84 MSFGFFPLHWHY 95
Score = 33.1 bits (72), Expect = 6.0
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 373 GRSVDLAIFSLHLAGISS 426
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 74.5 bits (175), Expect = 2e-12
Identities = 48/115 (41%), Positives = 53/115 (46%)
Frame = +1
Query: 307 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 486
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 487 FDQLPLFDEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQ 651
+LPLF F+DPAGGGDPILYQ
Sbjct: 178 LHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQ 232
Score = 62.1 bits (144), Expect = 1e-08
Identities = 37/96 (38%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 175
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 176 XXXXXXN*LVPLILGAPDIAFPRINNKDFDSYPPPL 283
N LVP+++GAPD+AFPR+NN F PP L
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
Score = 38.3 bits (85), Expect = 0.16
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +3
Query: 513 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 614
A+ +TA AGAIT+LLTDRN NTSF+
Sbjct: 187 AIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFY 220
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 74.5 bits (175), Expect = 2e-12
Identities = 48/115 (41%), Positives = 53/115 (46%)
Frame = +1
Query: 307 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 486
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 487 FDQLPLFDEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQ 651
+LPLF F+DPAGGGDPILYQ
Sbjct: 178 LHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQ 232
Score = 62.1 bits (144), Expect = 1e-08
Identities = 37/96 (38%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 175
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 176 XXXXXXN*LVPLILGAPDIAFPRINNKDFDSYPPPL 283
N LVP+++GAPD+AFPR+NN F PP L
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
Score = 38.3 bits (85), Expect = 0.16
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +3
Query: 513 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 614
A+ +TA AGAIT+LLTDRN NTSF+
Sbjct: 187 AIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFY 220
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 73.7 bits (173), Expect = 3e-12
Identities = 38/69 (55%), Positives = 44/69 (63%)
Frame = +2
Query: 71 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
AELG PG+L+GDDQ N IVTAHA N LVPL++GAPD+AFPR+N
Sbjct: 40 AELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAFPRMN 99
Query: 251 NKDFDSYPP 277
N F PP
Sbjct: 100 NMSFWLLPP 108
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 72.1 bits (169), Expect = 1e-11
Identities = 46/116 (39%), Positives = 54/116 (46%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 483
+VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G+SS
Sbjct: 120 LVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGM 179
Query: 484 SFDQLPLFDEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQ 651
+ +LPLF FFDPAGGGDPILYQ
Sbjct: 180 TMHRLPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQ 235
Score = 60.5 bits (140), Expect = 3e-08
Identities = 34/96 (35%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXX 175
GTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 17 GTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPA 76
Query: 176 XXXXXXN*LVPLILGAPDIAFPRINNKDFDSYPPPL 283
N VP+++GAPD+AFPR+NN F PP L
Sbjct: 77 MIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSL 112
Score = 39.5 bits (88), Expect = 0.069
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +3
Query: 513 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 614
+V +TAF AGAIT+LLTDRN NT+FF
Sbjct: 190 SVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFF 223
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 70.9 bits (166), Expect = 2e-11
Identities = 33/63 (52%), Positives = 42/63 (66%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR+NN
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRMNN 83
Query: 254 KDF 262
F
Sbjct: 84 MSF 86
Score = 67.3 bits (157), Expect = 3e-10
Identities = 43/112 (38%), Positives = 48/112 (42%)
Frame = +1
Query: 316 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 495
G GTG TVYPPLS + H G SVDL IFSLHLAG SS + D+
Sbjct: 105 GVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASSIMGAVNFITTILNMRSNLFNMDK 164
Query: 496 LPLFDEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQ 651
+ LF FFDP+GGGDPILYQ
Sbjct: 165 MSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQ 216
Score = 39.9 bits (89), Expect = 0.052
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +3
Query: 513 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 614
+V ITA AGAIT+LLTDRN+NTSFF
Sbjct: 171 SVFITAILLLLSLPVLAGAITMLLTDRNMNTSFF 204
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 70.9 bits (166), Expect = 2e-11
Identities = 47/116 (40%), Positives = 52/116 (44%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 483
+VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGM 177
Query: 484 SFDQLPLFDEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQ 651
S ++PLF FF+ AGGGDPI YQ
Sbjct: 178 SMHKMPLFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQ 233
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 74 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 247
EL PGS L G+ Q++N +V HA N ++PL++GA D++FPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDMSFPRI 98
Query: 248 NNKDF 262
N+ F
Sbjct: 99 NSIGF 103
Score = 34.7 bits (76), Expect = 2.0
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +3
Query: 513 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 614
A+ ITAF + IT+LL DRN NTSFF
Sbjct: 188 AIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFF 221
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 67.3 bits (157), Expect = 3e-10
Identities = 45/116 (38%), Positives = 53/116 (45%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 483
+VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGM 177
Query: 484 SFDQLPLFDEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQ 651
+ +LPLF FF+ +GGGDPILY+
Sbjct: 178 TMHKLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYE 233
Score = 48.4 bits (110), Expect = 1e-04
Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 74 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 247
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
Query: 248 NNKDF 262
NN F
Sbjct: 99 NNIAF 103
Score = 33.5 bits (73), Expect = 4.5
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +3
Query: 513 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 614
++ ITAF + IT+LL DRN NTSFF
Sbjct: 188 SIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFF 221
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 67.3 bits (157), Expect = 3e-10
Identities = 45/116 (38%), Positives = 53/116 (45%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 483
+VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGM 177
Query: 484 SFDQLPLFDEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQ 651
+ +LPLF FF+ +GGGDPILY+
Sbjct: 178 TMHKLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYE 233
Score = 48.4 bits (110), Expect = 1e-04
Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 74 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 247
EL PGS L G+ Q++N +V HA N L+PL++GA D AFPRI
Sbjct: 39 ELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRI 98
Query: 248 NNKDF 262
NN F
Sbjct: 99 NNIAF 103
Score = 33.5 bits (73), Expect = 4.5
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +3
Query: 513 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 614
++ ITAF + IT+LL DRN NTSFF
Sbjct: 188 SIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFF 221
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 66.5 bits (155), Expect = 5e-10
Identities = 44/116 (37%), Positives = 53/116 (45%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 483
+VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+ ISS
Sbjct: 118 LVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGM 177
Query: 484 SFDQLPLFDEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQ 651
+ +LPLF FF+ AGGGDPILY+
Sbjct: 178 TMHKLPLFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYE 233
Score = 46.8 bits (106), Expect = 5e-04
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 74 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 247
EL PG L G++Q++N +V HA N ++PL++GA D AFPRI
Sbjct: 39 ELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYMLPLMIGATDTAFPRI 98
Query: 248 NNKDF 262
NN F
Sbjct: 99 NNIGF 103
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 65.7 bits (153), Expect = 9e-10
Identities = 44/116 (37%), Positives = 52/116 (44%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 483
+VE G GTG TVYPPLSS +H G +VDLAIFSLH++G SS
Sbjct: 125 LVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQ 184
Query: 484 SFDQLPLFDEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQ 651
S ++PLF FFD +GGGDPILYQ
Sbjct: 185 SMYRIPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQ 240
Score = 60.9 bits (141), Expect = 3e-08
Identities = 34/96 (35%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 175
GTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 22 GTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVMPV 81
Query: 176 XXXXXXN*LVPLILGAPDIAFPRINNKDFDSYPPPL 283
N LVP+++G+PD+AFPR+NN F PP L
Sbjct: 82 MIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSL 117
Score = 40.3 bits (90), Expect = 0.039
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +3
Query: 522 ITAFXXXXXXXXXAGAITILLTDRNLNTSFF 614
+TAF AGAIT+LLTDRN NTSFF
Sbjct: 198 VTAFLLLLAVPVLAGAITMLLTDRNFNTSFF 228
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 64.5 bits (150), Expect = 2e-09
Identities = 35/67 (52%), Positives = 39/67 (58%)
Frame = +1
Query: 307 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 486
VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 487 FDQLPLF 507
+LPLF
Sbjct: 178 LHKLPLF 184
Score = 62.1 bits (144), Expect = 1e-08
Identities = 37/96 (38%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 175
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 176 XXXXXXN*LVPLILGAPDIAFPRINNKDFDSYPPPL 283
N LVP+++GAPD+AFPR+NN F PP L
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 63.7 bits (148), Expect = 4e-09
Identities = 43/115 (37%), Positives = 49/115 (42%)
Frame = +1
Query: 307 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 486
+ENG GTG T+YPPLS +H G SVDLAIF LHL+GISS
Sbjct: 119 IENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIR 178
Query: 487 FDQLPLFDEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQ 651
+L LF FF+ AGGGDPILYQ
Sbjct: 179 LHKLILFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQ 233
Score = 53.6 bits (123), Expect = 4e-06
Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +2
Query: 74 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
EL PG I D+Q+YN+I+TAHA N L+PL LG PD+ FPR+N
Sbjct: 40 ELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMPALIGGFGNFLLPLGLGGPDMGFPRLN 99
Query: 251 N 253
N
Sbjct: 100 N 100
Score = 37.1 bits (82), Expect = 0.37
Identities = 19/34 (55%), Positives = 21/34 (61%)
Frame = +3
Query: 513 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 614
AV ITA AG IT++LTDRN NTSFF
Sbjct: 188 AVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFF 221
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 62.1 bits (144), Expect = 1e-08
Identities = 37/96 (38%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXX 175
GTLY EL PG L GD Q+YN I+TAHA
Sbjct: 14 GTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPA 73
Query: 176 XXXXXXN*LVPLILGAPDIAFPRINNKDFDSYPPPL 283
N LVP+++GAPD+AFPR+NN F PP L
Sbjct: 74 MVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 60.9 bits (141), Expect = 3e-08
Identities = 34/95 (35%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXX 178
GTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 44 GTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVMPAL 103
Query: 179 XXXXXN*LVPLILGAPDIAFPRINNKDFDSYPPPL 283
N L+PL++G PD+AFPR+NN F PP L
Sbjct: 104 IGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSL 138
Score = 57.6 bits (133), Expect = 2e-07
Identities = 43/120 (35%), Positives = 52/120 (43%), Gaps = 4/120 (3%)
Frame = +1
Query: 304 IVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 471
I+E G GTG T+ YPPLS +H G SVDLAIF+LHL+G+SS
Sbjct: 146 IIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFALHLSGVSSLLGSINFITTVANMR 205
Query: 472 XXXXSFDQLPLFDEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQ 651
+L LF G T FF+ AGGGDPIL+Q
Sbjct: 206 TPGIKLHKLALF----GWATWSSRSRYFLGITMVLTDRNFNT---SFFEVAGGGDPILFQ 258
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 59.7 bits (138), Expect = 6e-08
Identities = 33/96 (34%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +2
Query: 2 GTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXX 175
GTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 18 GTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPA 77
Query: 176 XXXXXXN*LVPLILGAPDIAFPRINNKDFDSYPPPL 283
N VP+++G+PD+AFPR+NN F PP L
Sbjct: 78 MIGGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSL 113
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 8e-08
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 426
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 58.8 bits (136), Expect = 1e-07
Identities = 41/114 (35%), Positives = 44/114 (38%)
Frame = +1
Query: 310 ENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSF 489
E G GTG TVYPPLSS +H G SVDL IFS HL GI S
Sbjct: 123 EGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFN 182
Query: 490 DQLPLFDEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQ 651
LPLF F+DP GGGD +LYQ
Sbjct: 183 KDLPLFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQ 236
Score = 46.8 bits (106), Expect = 5e-04
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +2
Query: 74 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 247
EL PG L G+ YN I T H N VP+++GAPD++FPR+
Sbjct: 42 ELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAPDMSFPRL 101
Query: 248 NNKDF 262
NN F
Sbjct: 102 NNFSF 106
Score = 35.1 bits (77), Expect = 1.5
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +3
Query: 513 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 614
+V +T+F A AIT+LL DRN NTSF+
Sbjct: 191 SVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFY 224
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 58.0 bits (134), Expect = 2e-07
Identities = 35/116 (30%), Positives = 52/116 (44%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 483
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 484 SFDQLPLFDEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQ 651
+ +LPLF FF +GGGDP+LY+
Sbjct: 195 DYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYE 250
Score = 47.2 bits (107), Expect = 3e-04
Identities = 25/69 (36%), Positives = 35/69 (50%)
Frame = +2
Query: 83 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNKDF 262
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 263 DSYPPPLYY 289
P + +
Sbjct: 121 VVLLPSMLF 129
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 58.0 bits (134), Expect = 2e-07
Identities = 35/116 (30%), Positives = 52/116 (44%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 483
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 484 SFDQLPLFDEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQ 651
+ +LPLF FF +GGGDP+LY+
Sbjct: 195 DYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYE 250
Score = 47.2 bits (107), Expect = 3e-04
Identities = 25/69 (36%), Positives = 35/69 (50%)
Frame = +2
Query: 83 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNKDF 262
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 263 DSYPPPLYY 289
P + +
Sbjct: 121 VVLLPSMLF 129
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 58.0 bits (134), Expect = 2e-07
Identities = 35/116 (30%), Positives = 52/116 (44%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 483
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 484 SFDQLPLFDEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQ 651
+ +LPLF FF +GGGDP+LY+
Sbjct: 195 DYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYE 250
Score = 47.2 bits (107), Expect = 3e-04
Identities = 25/69 (36%), Positives = 35/69 (50%)
Frame = +2
Query: 83 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNKDF 262
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 263 DSYPPPLYY 289
P + +
Sbjct: 121 VVLLPSMLF 129
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 58.0 bits (134), Expect = 2e-07
Identities = 35/116 (30%), Positives = 52/116 (44%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 483
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 484 SFDQLPLFDEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQ 651
+ +LPLF FF +GGGDP+LY+
Sbjct: 195 DYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYE 250
Score = 47.2 bits (107), Expect = 3e-04
Identities = 25/69 (36%), Positives = 35/69 (50%)
Frame = +2
Query: 83 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNKDF 262
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 263 DSYPPPLYY 289
P + +
Sbjct: 121 VVLLPSMLF 129
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 57.6 bits (133), Expect = 2e-07
Identities = 40/116 (34%), Positives = 50/116 (43%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 483
+VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G SS
Sbjct: 123 LVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGM 182
Query: 484 SFDQLPLFDEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQ 651
++ +PLF FF+ AGGGD +LYQ
Sbjct: 183 KYENVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQ 238
Score = 49.2 bits (112), Expect = 9e-05
Identities = 29/72 (40%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +2
Query: 74 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 247
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
Query: 248 NNKDFDSYPPPL 283
NN F P L
Sbjct: 104 NNISFWLLVPSL 115
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 57.2 bits (132), Expect = 3e-07
Identities = 26/41 (63%), Positives = 30/41 (73%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 426
I+ENG GTG T+YPPLS +H VDL IF LHL+GISS
Sbjct: 144 IIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGISS 184
Score = 54.0 bits (124), Expect = 3e-06
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +2
Query: 74 ELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
EL PG I D+Q+YN+I+T+H N L+P+++G PD+AFPR+N
Sbjct: 66 ELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGGPDMAFPRLN 125
Query: 251 NKDFDSYPPPLY 286
N + P L+
Sbjct: 126 NVSYWLLIPSLF 137
Score = 37.9 bits (84), Expect = 0.21
Identities = 20/34 (58%), Positives = 22/34 (64%)
Frame = +3
Query: 513 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 614
AV ITA A AIT+LLTDRNLNTSF+
Sbjct: 214 AVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFY 247
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 56.0 bits (129), Expect = 7e-07
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 402
+VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 33 MVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 37.9 bits (84), Expect = 0.21
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2
Query: 209 LILGAPDIAFPRINNKDFDSYPPPL 283
L+LGAPD+AFPR+NN F PP L
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSL 25
Score = 34.3 bits (75), Expect = 2.6
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +2
Query: 509 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF 613
M C +Y TCFS S+Y IIN K KY IF
Sbjct: 98 MICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIF 132
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 55.2 bits (127), Expect = 1e-06
Identities = 35/116 (30%), Positives = 49/116 (42%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 483
+++ GAG G T YPP+S+ R+VD AIF++H++G SS
Sbjct: 223 MIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGASSILGSINFITTFLNMRAPGM 282
Query: 484 SFDQLPLFDEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQ 651
+ ++PLF FFDPAGGGDPIL+Q
Sbjct: 283 TLHKVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQ 338
Score = 43.6 bits (98), Expect = 0.004
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +2
Query: 71 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 244
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 245 INNKDFDSY 271
+NN + Y
Sbjct: 203 LNNLSYWMY 211
Score = 35.5 bits (78), Expect = 1.1
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +3
Query: 513 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 614
+V +TA+ AGAIT+LLTDRN T+FF
Sbjct: 293 SVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFF 326
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 50.4 bits (115), Expect = 4e-05
Identities = 38/113 (33%), Positives = 47/113 (41%)
Frame = +1
Query: 313 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFD 492
NGAGTG TVY PLS++ G +VD+AI SLH+AG SS +
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLH 222
Query: 493 QLPLFDEL*GXXXXXXXXXXXXXXXXXXXX*QIET*IHHFFDPAGGGDPILYQ 651
++PLF F+D AGGGDP LYQ
Sbjct: 223 KMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQ 275
Score = 42.3 bits (95), Expect = 0.010
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +2
Query: 113 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNKDF 262
++N ++TAH N VP+++GAPD+AFPR+NN F
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISF 142
Score = 33.5 bits (73), Expect = 4.5
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +3
Query: 513 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 614
+V +TAF A AIT+LLTDRN T+F+
Sbjct: 230 SVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFY 263
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 50.4 bits (115), Expect = 4e-05
Identities = 25/54 (46%), Positives = 32/54 (59%)
Frame = +1
Query: 346 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 507
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLF 125
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 49.2 bits (112), Expect = 9e-05
Identities = 29/72 (40%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +2
Query: 74 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 247
EL N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R+
Sbjct: 44 ELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARL 103
Query: 248 NNKDFDSYPPPL 283
NN F P L
Sbjct: 104 NNISFWLLVPSL 115
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 48.4 bits (110), Expect = 1e-04
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = +1
Query: 316 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 426
G G VYPP SS +AH +VDL IF LHLAGISS
Sbjct: 111 GVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISS 147
Score = 37.1 bits (82), Expect = 0.37
Identities = 25/69 (36%), Positives = 29/69 (42%)
Frame = +2
Query: 77 LGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNK 256
L G +IG QI VTA A L PL +GAP +A PR+ N
Sbjct: 31 LSXXGQVIGXGQIXXVGVTAXALVMIFFFVMPTLXGGFGXXLXPLXVGAPXMAXPRLXNM 90
Query: 257 DFDSYPPPL 283
F PP L
Sbjct: 91 SFWLLPPSL 99
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 48.4 bits (110), Expect = 1e-04
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 74 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 247
EL +PG G Q+YN+++T H N ++PL+LGAP++AFPR+
Sbjct: 49 ELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAPEMAFPRV 108
Query: 248 NNKDF 262
N F
Sbjct: 109 NALSF 113
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.0 bits (109), Expect = 2e-04
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +2
Query: 506 LMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF 613
+M C +YS +TC WSYYN IN SKLKYI+F
Sbjct: 83 IMICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILF 118
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 47.2 bits (107), Expect = 3e-04
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +2
Query: 89 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNKDFDS 268
G L GD Q YN ++T+H N +P++ G PD+ FPR+NN F
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWM 107
Query: 269 Y 271
Y
Sbjct: 108 Y 108
Score = 36.7 bits (81), Expect = 0.49
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +1
Query: 304 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 426
+ E G G G T+YP L H + D +F++HL GISS
Sbjct: 120 LTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISS 160
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 46.8 bits (106), Expect = 5e-04
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +1
Query: 316 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 426
G G G T+YPPLS++ G +DLA+FSLH+AG+SS
Sbjct: 123 GLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSS 159
Score = 36.3 bits (80), Expect = 0.64
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
EL +PG + +Y++I+T HA N +PL++ D++ PR+NN
Sbjct: 42 ELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPTSIGGLGNWFIPLMIKIKDLSMPRLNN 101
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 46.8 bits (106), Expect = 5e-04
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +2
Query: 74 ELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 247
EL PG+ L G+ Q++N +V HA N L+PL++GA D++F R+
Sbjct: 39 ELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGASDMSFARL 98
Query: 248 NNKDFDSYPPPL 283
NN F PP L
Sbjct: 99 NNISFWLLPPAL 110
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 45.2 bits (102), Expect = 0.001
Identities = 24/68 (35%), Positives = 35/68 (51%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
EL +PG + + YN+++T+H N L+PL++GA D+AFPRIN
Sbjct: 122 ELADPGMTVISNTFYNSLLTSHGITMLFLFATPIIAAFS-NYLIPLLIGADDMAFPRINA 180
Query: 254 KDFDSYPP 277
F PP
Sbjct: 181 IAFWLLPP 188
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 41.9 bits (94), Expect = 0.013
Identities = 22/59 (37%), Positives = 27/59 (45%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
EL PG I D YN T H N ++PL+LGA D+AFPR+N
Sbjct: 70 ELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFPRLN 128
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 41.9 bits (94), Expect = 0.013
Identities = 22/66 (33%), Positives = 30/66 (45%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
EL PG I D YN + T H N L+P+++GA D+AFP++N
Sbjct: 63 ELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPKLNL 122
Query: 254 KDFDSY 271
F Y
Sbjct: 123 LSFYVY 128
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 41.1 bits (92), Expect = 0.023
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +2
Query: 86 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
PG + D + YN ++T H N L+PL++GA D+AFPR+N
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLN 56
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 40.7 bits (91), Expect = 0.030
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +1
Query: 307 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 426
+E G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 126 LEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIAS 163
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 39.1 bits (87), Expect = 0.091
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 74 ELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
EL G I DD +YNT + H N +PL++GA D+AFPR+N
Sbjct: 42 ELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKDVAFPRVN 101
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 39.1 bits (87), Expect = 0.091
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +1
Query: 316 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 426
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 36.7 bits (81), Expect = 0.49
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
EL P + + D +YN + T H N L+P ++GAPD+AFP++N
Sbjct: 64 ELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPKLNA 122
Query: 254 KDF 262
F
Sbjct: 123 AAF 125
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 36.7 bits (81), Expect = 0.49
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +1
Query: 319 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 426
A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 36.7 bits (81), Expect = 0.49
Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +1
Query: 310 ENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISS 426
E G GTG T+YPPLS+++ +VD+ IF L ++G++S
Sbjct: 124 EFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVAS 163
Score = 33.5 bits (73), Expect = 4.5
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 113 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
+YN I T H N +P++ G+P++A+PRIN+
Sbjct: 58 LYNMIFTIHGIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPRINS 104
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 36.3 bits (80), Expect = 0.64
Identities = 22/64 (34%), Positives = 28/64 (43%)
Frame = +2
Query: 71 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
A+L P + D YN I T H N +VPL +GA D+AFP +N
Sbjct: 80 AQLALPNNSFLDSNHYNEIFTTHGTIMIIFMAMPFLIGLI-NVVVPLQIGARDVAFPYLN 138
Query: 251 NKDF 262
N F
Sbjct: 139 NLSF 142
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 36.3 bits (80), Expect = 0.64
Identities = 21/68 (30%), Positives = 30/68 (44%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
EL P ++YN ++T H N L+PL++G D+AFPR+N
Sbjct: 55 ELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVGTEDMAFPRLNA 113
Query: 254 KDFDSYPP 277
F PP
Sbjct: 114 VAFWLTPP 121
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 35.9 bits (79), Expect = 0.85
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +2
Query: 71 AELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
AEL PG ++ +N + T H N ++PL +GAPD+AFPR+N
Sbjct: 65 AELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIGAPDVAFPRLN 123
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 35.9 bits (79), Expect = 0.85
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
+L P + + YN I+T H N +VPL+LGA D+A PR+N
Sbjct: 52 QLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVALPRVN 110
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 35.5 bits (78), Expect = 1.1
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 74 ELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 247
EL +P S GD Y +VTAH N L+P +G+ D+A+PR+
Sbjct: 88 ELAHPESPFFKGDSLRYLQVVTAHGLIMVFFVVVPILFGGFANFLIPYHVGSKDVAYPRL 147
Query: 248 NNKDF 262
N+ F
Sbjct: 148 NSIGF 152
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 35.1 bits (77), Expect = 1.5
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 110 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
+ Y +VT HA N L+PL++GA D+AFP +N
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLN 132
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 34.7 bits (76), Expect = 2.0
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
+LG P + +YN + T H N +VPL++GA D+AFPR+N
Sbjct: 59 QLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLMPLNVGLG-NYMVPLMIGARDMAFPRLN 116
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 34.3 bits (75), Expect = 2.6
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +2
Query: 116 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNKDF 262
Y I T H N L+PL++GA D+AFPR+N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSF 134
Score = 32.7 bits (71), Expect = 7.9
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 319 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 426
AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 155 AGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSS 190
>UniRef50_A2Q7J2 Cluster: Contig An01c0050, complete genome; n=1;
Aspergillus niger|Rep: Contig An01c0050, complete genome
- Aspergillus niger
Length = 937
Score = 34.3 bits (75), Expect = 2.6
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = -2
Query: 631 LLQQDQKNDVFKFR--SVNNIVIAPAKTGSDNNNKNAVIPTAHQIRVIDQM 485
LL+QD +N++F+F + NN ++ P + D +NA + + ++D +
Sbjct: 26 LLKQDMENEIFRFNLWAANNFILTPGRASMDWRLRNAPLLQSTMAELLDDL 76
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 33.9 bits (74), Expect = 3.4
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
+L PG + + +N + T HA N +PL++GA D+AFPR+N
Sbjct: 57 QLARPGLEVVTARTFNALFTMHATTMIFLGVMPLLSAFM-NYFLPLMIGARDVAFPRLN 114
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 33.9 bits (74), Expect = 3.4
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 110 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 250
+ Y + T HA N L+PL++GA D+AFP++N
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLN 136
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 33.9 bits (74), Expect = 3.4
Identities = 20/68 (29%), Positives = 29/68 (42%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
EL + +YN ++T+H N +PL++ A D+AFPRIN
Sbjct: 96 ELATSSETLISPSLYNGLLTSHGITMLFLFGTPMIAAFG-NYFIPLLIDADDMAFPRINA 154
Query: 254 KDFDSYPP 277
F PP
Sbjct: 155 IAFWLLPP 162
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 33.5 bits (73), Expect = 4.5
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +1
Query: 325 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISS 426
+G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISS 169
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 33.1 bits (72), Expect = 6.0
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 74 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 253
+L P + +++N + T H N VPL++GA D+AFPR+N+
Sbjct: 60 QLAFPNNTFLSPEMFNQLFTMHGTTMVFLVGMPVLTGFA-NYFVPLMIGARDVAFPRLNS 118
Query: 254 KDF 262
F
Sbjct: 119 FGF 121
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 478,541,829
Number of Sequences: 1657284
Number of extensions: 7402189
Number of successful extensions: 16511
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 15749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16462
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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