Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0043
(461 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 31 0.11
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 1.1
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 27 1.4
SPAC17A5.09c |||protein phosphatase regulatory subunit Glc9|Schi... 27 1.8
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 26 2.4
SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch... 26 2.4
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 26 2.4
SPAC25A8.02 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 2.4
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 3.2
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 25 5.6
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 25 5.6
SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr 1|||Ma... 25 7.4
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 25 7.4
SPBC56F2.05c |||transcription factor |Schizosaccharomyces pombe|... 25 7.4
SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Ma... 25 7.4
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 24 9.8
SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces p... 24 9.8
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 30.7 bits (66), Expect = 0.11
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -1
Query: 287 SWPSSEQWRPSTSFQATSPLFSCLQLLMISSTEGVFSGESARRGTGTPTGS 135
++P+S PST+ + SPL S L+ + T G S S+ T +P S
Sbjct: 386 AFPNSSTSNPSTAPASASPLASTLKPSTANDTNGSSSSSSSNPRTSSPLAS 436
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.5 bits (58), Expect = 1.1
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 52 AMEVETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKTPSVEEIMRS 213
A+ ETKST ++ GG A +A P +P P +P P+ E + ++
Sbjct: 867 AITPETKST---VNQIMSGGEALAAPVAVPAPIPAPVAEPAPPAAPAKEVVEKA 917
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 27.1 bits (57), Expect = 1.4
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +1
Query: 7 DAIQLFRSLCRLKVEAMEVETKSTEIRCQEMSKGGLAYE 123
D L+ L R + +E E ++ +C E K L YE
Sbjct: 2536 DEHDLYHGLWRRRANFLETEVATSHEQCHEWEKAQLVYE 2574
>SPAC17A5.09c |||protein phosphatase regulatory subunit
Glc9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 310
Score = 26.6 bits (56), Expect = 1.8
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -1
Query: 263 RPSTSFQATSPLFSCLQLLMISSTEGVFSGESARRGTGTPT 141
R S+ T + S Q M+SST + ES GTGTP+
Sbjct: 11 RMSSPSLETDSMESGQQQNMVSSTPSIDMNESDCSGTGTPS 51
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 26.2 bits (55), Expect = 2.4
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = -1
Query: 308 GCGTPPRSWPSSEQWRPSTSFQATSPLFSCLQLLMISS--TEGVFSGESARRGTGTPTGS 135
G GT ++ SS + ++S TS S +S T + + ++ TGT TGS
Sbjct: 334 GTGTGSATFTSSPPFYSNSSVIPTSVPSSVSSFTSSNSSYTTTLTASNTSITYTGTGTGS 393
Query: 134 ASITSYARPPF 102
A+ TS PPF
Sbjct: 394 ATFTS--SPPF 402
Score = 25.8 bits (54), Expect = 3.2
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = -1
Query: 308 GCGTPPRSWPSSEQWRPSTSFQATSPLFSCLQLLMISS--TEGVFSGESARRGTGTPTGS 135
G GT ++ SS + ++S TS S +S T + + + TGT TGS
Sbjct: 388 GTGTGSATFTSSPPFYSNSSVIPTSVPSSVSSFTSSNSSYTTTLTASNTTVTFTGTGTGS 447
Query: 134 ASITSYARPPF 102
A+ TS PPF
Sbjct: 448 ATFTS--SPPF 456
>SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1822
Score = 26.2 bits (55), Expect = 2.4
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 7 DAIQLFRSLCRLKVEAMEVETKSTEIRCQEM 99
DA +FRS+CRL V + K + IR Q M
Sbjct: 388 DAFLVFRSMCRLAVRQTSPD-KVSNIRSQAM 417
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 26.2 bits (55), Expect = 2.4
Identities = 10/46 (21%), Positives = 27/46 (58%)
Frame = +2
Query: 320 TNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRL 457
T N I++ + + + HEE + ELR++++++++ E+ ++
Sbjct: 85 TLNNILSMRTETGSMAKAHEEVSQQINTELRNKIREYIDQTEQQKV 130
>SPAC25A8.02 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 390
Score = 26.2 bits (55), Expect = 2.4
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -1
Query: 293 PRSWPSSEQWRPSTSFQATSPLFSCLQLLMISSTEGVFS 177
P PS +Q +P TSF + L+ ++ IS G+FS
Sbjct: 276 PLQLPSPDQ-KPMTSFSSEQMLYIMYNIVWISWNCGIFS 313
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.8 bits (54), Expect = 3.2
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -1
Query: 287 SWPSSEQWRPSTSFQATSPLFSCLQLLMIS-STEGVFSGESARRGTGTPTGSASIT 123
SW SS + PST+ AT S + +S S+ + SA + + +AS+T
Sbjct: 955 SWSSSSEVDPSTAASATGSSTSSIATASVSGSSTSSVATASATDSSTSSIAAASVT 1010
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 25.0 bits (52), Expect = 5.6
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 9/91 (9%)
Frame = -1
Query: 281 PSSEQWRP--STSFQATSPLFSCLQLLMISSTEGVFSGESARRGTGTPTGSASI------ 126
PSS Q P S+S + L +SST S T TGS+S
Sbjct: 643 PSSSQTTPTSSSSITGSQSLKETSSPAYVSSTVSYTSSSVDSSSTYNSTGSSSSDSQSFS 702
Query: 125 -TSYARPPFDISWQRISVDLVSTSMASTFNR 36
T+Y+ P I+ + S+ TSM S+ +R
Sbjct: 703 GTTYSDPTTTITSEVSSILSSPTSMQSSVSR 733
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 25.0 bits (52), Expect = 5.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 332 IVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEK 448
I+A + L A+ E +E+ E +NE R+K+ E +K
Sbjct: 1592 ILAARSELVAEKEKTKEELENQLNEKSQRIKELEEQAQK 1630
>SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 899
Score = 24.6 bits (51), Expect = 7.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 116 ARPPFDISWQRISVDLVSTSMASTFNRQRLRNS 18
A PF ISW + S A+TF++ +L N+
Sbjct: 469 ASEPFSISWPQNPSISGSVHSATTFDKAQLSNT 501
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 24.6 bits (51), Expect = 7.4
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 314 EQTNNFIVATKEA-LDAKMETHEEKREAYINELRSRLKDHLEGVEKTRL 457
+Q VA ++A +E K E + + + SR+K + +E TRL
Sbjct: 460 KQVEELTVALNSGKMNAIVEAESSKNELWDSMMVSRMKTQEQSIELTRL 508
>SPBC56F2.05c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 397
Score = 24.6 bits (51), Expect = 7.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 124 VILAEPVGVPVPRRADSPEKTPSVEEI 204
V L +P+ P P A+S + T S E++
Sbjct: 182 VSLPQPIAAPAPPSAESSKSTISDEDV 208
>SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr
3|||Manual
Length = 963
Score = 24.6 bits (51), Expect = 7.4
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = -1
Query: 308 GCGTPPRSWPSSEQWRPSTSFQATSPLFSCLQLLMISSTE 189
G +PP + W+ S S +A S +CL L E
Sbjct: 742 GVQSPPLILKKHDNWKVSLSSRAPSEAINCLSKLAFQCHE 781
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 24.2 bits (50), Expect = 9.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 302 GTPPRSWPSSEQWRPSTSFQATSPLFS 222
G+PP PSS S+S+ T+P FS
Sbjct: 531 GSPPS--PSSSTKSASSSYSTTTPAFS 555
>SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 394
Score = 24.2 bits (50), Expect = 9.8
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 247 KLVDGRHCSEDGQDRGGVPHPQRADE*LH 333
+L+ G+HCSE G P P+ LH
Sbjct: 333 ELLTGKHCSECGTPLYSDPSPEELGIWLH 361
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,493,123
Number of Sequences: 5004
Number of extensions: 24603
Number of successful extensions: 124
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 122
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 174340060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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