Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0043
(461 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0478 - 14526180-14526578 36 0.012
07_01_0463 + 3502708-3503535 31 0.60
11_06_0289 - 21969248-21973516 30 1.0
11_06_0185 + 21018045-21022307 30 1.0
01_06_0042 - 25911662-25911736,25912409-25912607,25913275-259133... 30 1.0
06_03_1201 + 28359286-28359452,28360018-28360075,28361060-283611... 29 1.8
01_06_1419 + 37225007-37225011,37225633-37225852,37226347-372265... 29 2.4
03_02_0518 - 9059885-9060181,9061749-9061898,9062222-9062246,906... 28 3.2
02_04_0379 - 22491069-22491503 28 4.2
05_06_0276 + 26878732-26879574,26879920-26880387,26880800-268810... 27 5.6
05_01_0186 - 1337657-1337977,1339142-1339203,1339297-1339346,133... 27 5.6
11_06_0689 - 26294961-26294976,26295271-26295414,26295506-262959... 27 7.3
07_03_0918 - 22581625-22581687,22581773-22581868,22581980-225822... 27 7.3
04_04_0387 + 24869594-24871480 27 7.3
03_01_0185 - 1485023-1485733 27 7.3
09_04_0713 - 19675437-19675551,19675872-19676017,19676226-196762... 27 9.7
08_02_0847 - 21828372-21828545,21829043-21829206,21829831-218299... 27 9.7
05_03_0089 - 8327044-8327142,8327238-8327306,8327413-8327504,832... 27 9.7
02_05_0527 + 29773528-29773771,29774785-29775141,29775228-29775250 27 9.7
02_02_0544 + 11367660-11368061,11368139-11368478,11369444-113695... 27 9.7
>05_03_0478 - 14526180-14526578
Length = 132
Score = 36.3 bits (80), Expect = 0.012
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +1
Query: 172 SPEKTPSVEEIMRS*RQLKRGDVAWKLVDGRHCSEDGQDRGGVPHPQRADE*LHRRHQG- 348
+P + E+ R R+L+RGD W+ + G C G G QR DE HR+H G
Sbjct: 18 APRRRHDEEDRQRQ-RRLQRGDEGWQTI-GSGCVSSG---GSWARRQRRDEEDHRQHDGY 72
Query: 349 -GSRRQDGDPRGKTR 390
G+RR+ + + R
Sbjct: 73 RGARRRGQEDHRRRR 87
>07_01_0463 + 3502708-3503535
Length = 275
Score = 30.7 bits (66), Expect = 0.60
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = +2
Query: 314 EQTNN--FIVATKEALDAKMETHEEKREAYINELRSRLKDHLEG 439
E+TN+ + A E +D K++ + K+E + +L+ +LK+ LEG
Sbjct: 180 EKTNDPAKLKAKLEKIDTKIQDLQAKKEDILRQLKEQLKEELEG 223
>11_06_0289 - 21969248-21973516
Length = 1422
Score = 29.9 bits (64), Expect = 1.0
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2
Query: 347 EALDAKMETHE--EKREAYINELRSRLKDHLEGVEKTR 454
+A + ++TH+ E + I +L RLKDH+E EKT+
Sbjct: 385 QAKNKAVDTHKLPEWNDNLIEKLAMRLKDHMEADEKTK 422
>11_06_0185 + 21018045-21022307
Length = 1420
Score = 29.9 bits (64), Expect = 1.0
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2
Query: 347 EALDAKMETHE--EKREAYINELRSRLKDHLEGVEKTR 454
+A + ++TH+ E + I +L RLKDH+E EKT+
Sbjct: 385 QAKNKAVDTHKLPEWNDNLIEKLAMRLKDHMEADEKTK 422
>01_06_0042 -
25911662-25911736,25912409-25912607,25913275-25913348,
25913431-25913580,25913666-25913821,25915378-25915464,
25915706-25915765,25915878-25916414,25917292-25917585
Length = 543
Score = 29.9 bits (64), Expect = 1.0
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +1
Query: 283 QDRGGVPHPQRADE*LHRRHQGGSRRQDGDPRGKTRGLHQRAALPSQG 426
+DRGG HP+RA E R +R +GD R +R SQG
Sbjct: 32 EDRGGHRHPERAGEEQERAED--DKRDEGDGERDAREDKERREGDSQG 77
>06_03_1201 +
28359286-28359452,28360018-28360075,28361060-28361152,
28362100-28362421,28362698-28362982,28363431-28363459
Length = 317
Score = 29.1 bits (62), Expect = 1.8
Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 217 RQLKRGDVAWKLVDGRHCSEDGQD---RGGVPHPQRADE*LHRRHQGGSRRQDGDP 375
R+ RG V+ + GRH GQ RGG PH QRA R GG Q G P
Sbjct: 4 REEARGGVSH--LQGRHGIAGGQGHLPRGGAPHRQRAAS----RGGGGEDGQQGKP 53
>01_06_1419 +
37225007-37225011,37225633-37225852,37226347-37226516,
37226615-37226676,37227002-37227207,37227581-37227634
Length = 238
Score = 28.7 bits (61), Expect = 2.4
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +2
Query: 308 RSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGV 442
RS +++I+ +K + TH+E E+ +NE ++ +K L+ V
Sbjct: 139 RSILKSSYIIVSKRGKFPTLVTHQESLESKVNETKATVKFQLKKV 183
>03_02_0518 -
9059885-9060181,9061749-9061898,9062222-9062246,
9062292-9062548
Length = 242
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +1
Query: 133 AEPVGVPVPRRADSPEKTPSVEEIMRS*RQLKRGDVAWKLVD 258
+ P GV +P R++ T +EI ++ R+ +RG+ + +VD
Sbjct: 17 SNPTGVCLPTRSEPSSSTIRSDEIDQASRRHRRGEQQFNVVD 58
>02_04_0379 - 22491069-22491503
Length = 144
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/63 (28%), Positives = 22/63 (34%)
Frame = +1
Query: 226 KRGDVAWKLVDGRHCSEDGQDRGGVPHPQRADE*LHRRHQGGSRRQDGDPRGKTRGLHQR 405
+RGD GR G V +R RR +G + RGK G H
Sbjct: 71 RRGDGGVGAARGRVARRGAASGGAVGRSRRTGSGAKRRRRGADAHLTRERRGKRDGTHNL 130
Query: 406 AAL 414
A L
Sbjct: 131 ARL 133
>05_06_0276 +
26878732-26879574,26879920-26880387,26880800-26881021,
26881153-26881278,26881309-26881573,26881719-26881936
Length = 713
Score = 27.5 bits (58), Expect = 5.6
Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 3/69 (4%)
Frame = +1
Query: 256 DGRHCSEDGQDRGGVPHPQRADE*LHRRHQGGSRRQDGDPRGKTRGLHQ---RAALPSQG 426
D R DG D+ G+ QRAD R+ RR D D G R+ P +
Sbjct: 199 DSRGRRSDGDDQKGICREQRADH-DDRKDSARERRADRDESNGESGRSSRRGRSVSPEEH 257
Query: 427 SS*GR*EDQ 453
GR E Q
Sbjct: 258 RHRGRHESQ 266
>05_01_0186 -
1337657-1337977,1339142-1339203,1339297-1339346,
1339447-1339544,1340622-1341002,1341123-1341128,
1341380-1341886,1342039-1342113,1342209-1342397
Length = 562
Score = 27.5 bits (58), Expect = 5.6
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 323 NNFIVATKEALDAKMETHEE-KREAYINELRSRLKDH 430
N+ I EALD ++TH E + + S LKDH
Sbjct: 367 NSMISEAGEALDEYIQTHSEVSHRGVLGNISSILKDH 403
>11_06_0689 -
26294961-26294976,26295271-26295414,26295506-26295909,
26296112-26296261,26296334-26296497,26296526-26296836,
26296948-26297084,26297276-26297416,26297821-26297867,
26297977-26298072,26298168-26298249,26298332-26298472,
26298607-26298702,26298809-26298877,26298959-26299030,
26299201-26299368,26299577-26299711,26299792-26299958,
26301213-26301369
Length = 898
Score = 27.1 bits (57), Expect = 7.3
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = -1
Query: 296 PPRSWPSSEQWRPSTSFQATSPLFSCLQLLMISSTEGVFSGESARRGTGTPTGSASITSY 117
P SW S S F+ T+ SC SS + + SA + G+ GSASI
Sbjct: 784 PQWSWAGSVATEDSDDFEVTT---SC------SSEQDMVRPTSAPKAPGSANGSASIARK 834
Query: 116 ARP 108
A+P
Sbjct: 835 AQP 837
>07_03_0918 -
22581625-22581687,22581773-22581868,22581980-22582268,
22582341-22582477,22582567-22582683,22583277-22583440,
22583542-22583756,22583838-22584004,22584206-22584559,
22584647-22584795,22584907-22585030,22585132-22585371,
22585723-22586140,22586297-22586920,22586999-22587183,
22587302-22587412,22587583-22587789,22587869-22587967,
22588063-22588159,22588296-22588384,22588495-22588548,
22588671-22588793,22588872-22588940,22589020-22589089,
22589202-22589260,22589367-22589570,22590032-22590060,
22590375-22590433,22590513-22590634,22591637-22591830,
22591974-22592088
Length = 1680
Score = 27.1 bits (57), Expect = 7.3
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = +1
Query: 7 DAIQLFRSLCR--LKVEAMEVETKSTEIRCQEMSKG 108
DA+ LFR+LC+ +K E+ EV TK T + E+ +G
Sbjct: 274 DALLLFRTLCKMSMKEESDEVATK-TRLLSLELLQG 308
>04_04_0387 + 24869594-24871480
Length = 628
Score = 27.1 bits (57), Expect = 7.3
Identities = 24/108 (22%), Positives = 39/108 (36%), Gaps = 1/108 (0%)
Frame = +1
Query: 52 AMEVETKSTEIRCQEMSKG-GLAYEVILAEPVGVPVPRRADSPEKTPSVEEIMRS*RQLK 228
A+ ST I S G A A P P R D PE+ P+V RS + K
Sbjct: 49 ALRRRRNSTTIHASSSSAAAGAAAASFPASSTPPPRPPRTDPPEEHPTVARAGRSKKHRK 108
Query: 229 RGDVAWKLVDGRHCSEDGQDRGGVPHPQRADE*LHRRHQGGSRRQDGD 372
++ G + + R + + + +RR + ++ D
Sbjct: 109 PS--GGRIEGGGDVRREAKSRARIRSRRLGENAFYRRKRRAAKENQAD 154
>03_01_0185 - 1485023-1485733
Length = 236
Score = 27.1 bits (57), Expect = 7.3
Identities = 22/74 (29%), Positives = 28/74 (37%)
Frame = +1
Query: 142 VGVPVPRRADSPEKTPSVEEIMRS*RQLKRGDVAWKLVDGRHCSEDGQDRGGVPHPQRAD 321
V P P + TPSV ++ R+L+RG V ED R P P R
Sbjct: 72 VPTPAPNTVHDADGTPSVGTLLLQLRELERG------VRALGVREDRGIRPATPPPPRHR 125
Query: 322 E*LHRRHQGGSRRQ 363
GG RR+
Sbjct: 126 RSASDASSGGRRRR 139
>09_04_0713 -
19675437-19675551,19675872-19676017,19676226-19676259,
19676333-19676473,19676860-19676924,19677022-19677108,
19677186-19677254,19677457-19677548,19677781-19677853,
19678129-19678205,19678490-19678684,19678804-19678861,
19679423-19679517,19680071-19680191
Length = 455
Score = 26.6 bits (56), Expect = 9.7
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = -1
Query: 209 LMISSTEGVFSGESARRGTGTPTGSASITSY 117
L+I+ST G S E ARRG PT S S+ +Y
Sbjct: 25 LLITST-GFSSSELARRGVNAPT-SQSLLNY 53
>08_02_0847 -
21828372-21828545,21829043-21829206,21829831-21829967,
21830909-21831241,21832067-21833244
Length = 661
Score = 26.6 bits (56), Expect = 9.7
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +1
Query: 61 VETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKTPSVE 198
VE T +R L + A P G P+PRR + PEK E
Sbjct: 277 VEMVRTSVRMTRAMYAQLVQQNFQA-PRGYPMPRREEGPEKWMEAE 321
>05_03_0089 -
8327044-8327142,8327238-8327306,8327413-8327504,
8327932-8329042
Length = 456
Score = 26.6 bits (56), Expect = 9.7
Identities = 19/79 (24%), Positives = 28/79 (35%)
Frame = -1
Query: 272 EQWRPSTSFQATSPLFSCLQLLMISSTEGVFSGESARRGTGTPTGSASITSYARPPFDIS 93
+ W P TS + +S + GV A G PTG A+I S
Sbjct: 29 DDWLPITSSRTAKWYYSAFHNVTAMVGAGVLGLPFAMSQLGWPTGVAAIASSFAITLYTL 88
Query: 92 WQRISVDLVSTSMASTFNR 36
WQ + + + F+R
Sbjct: 89 WQLVELHEPAPGGGKRFDR 107
>02_05_0527 + 29773528-29773771,29774785-29775141,29775228-29775250
Length = 207
Score = 26.6 bits (56), Expect = 9.7
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -2
Query: 454 PGLLNALKMILETGAQLVDVGLAFFLVGLHLGVESLL 344
PGL+ LKM GA VG GL++GVE L+
Sbjct: 143 PGLIRTLKMCGSYGATFAAVG------GLYIGVEQLV 173
>02_02_0544 +
11367660-11368061,11368139-11368478,11369444-11369571,
11371249-11371404
Length = 341
Score = 26.6 bits (56), Expect = 9.7
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +1
Query: 220 QLKRGDVAWKLVDGRHCS-EDGQDRGGVPHPQRADE*LHRRHQGGSRRQDGDPRGK 384
+L RG+ A L G E G RGG +RA L +G +R+ G P G+
Sbjct: 272 RLLRGEAAANLQGGGGDGPEKGARRGGGLQGRRASGGLAAEREGANRQGGGCPAGR 327
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,919,829
Number of Sequences: 37544
Number of extensions: 213956
Number of successful extensions: 842
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 919380308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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