Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0042
         (641 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    24   1.2  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   3.7  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.6  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 12/49 (24%), Positives = 22/49 (44%)
 Frame = -2

Query: 427 RVLAFFSRSIEEXFAKPGRFTVSIEK*APMAKYWIDAATSSWICFLIML 281
           RVL   +  +   F+ P  F    ++   M + WID  T  W  ++ ++
Sbjct: 162 RVLVMLAWLLSILFSLPTVFLFEEKQVQSMPQCWIDLQTWQWKVYITLV 210


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = +1

Query: 493 VQGPRHTSWESGASALEHALKLESDVTNSIREVIKTCE 606
           ++GP+  +W+    +      +  +V +S R+   TCE
Sbjct: 101 IRGPKRKTWKVEEDSPSPTSSVSPEVKDSSRDRPFTCE 138


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = +1

Query: 568 VTNSIREVIKTCESSFNDL 624
           V ++++ V+KT  S+F+D+
Sbjct: 387 VLHTVKTVLKTTMSTFSDI 405


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,695
Number of Sequences: 336
Number of extensions: 2494
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)