Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0042
         (641 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g40300.1 68415.m04964 ferritin, putative similar to ferritin ...    30   1.5  
At5g12040.2 68418.m01407 carbon-nitrogen hydrolase family protei...    28   6.1  
At5g12040.1 68418.m01408 carbon-nitrogen hydrolase family protei...    28   6.1  
At4g30230.1 68417.m04299 hypothetical protein                          27   8.0  
At3g56090.1 68416.m06234 ferritin, putative similar to ferritin ...    27   8.0  
At3g19610.1 68416.m02486 hypothetical protein                          27   8.0  

>At2g40300.1 68415.m04964 ferritin, putative similar to ferritin
           subunit cowpea2 precursor [Vigna unguiculata]
           GI:2970654; contains Pfam profile PF00210: Ferritin-like
           domain
          Length = 259

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +2

Query: 380 LREXFFDAATEEREHATKLIDYLLMRG 460
           L + F +++ EEREHA KL++Y   RG
Sbjct: 132 LAKFFKESSLEEREHAEKLMEYQNKRG 158


>At5g12040.2 68418.m01407 carbon-nitrogen hydrolase family protein
           similar to Nit protein 2 [Homo sapiens] GI:9367116;
           contains Pfam profile PF00795: hydrolase,
           carbon-nitrogen family
          Length = 294

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 523 SGASALEHALKLESDVTNSIREVIKTCESSFN 618
           S  S   H LKL S  T+++R +  +  SSFN
Sbjct: 37  SPRSITSHTLKLPSSSTSALRSISSSMASSFN 68


>At5g12040.1 68418.m01408 carbon-nitrogen hydrolase family protein
           similar to Nit protein 2 [Homo sapiens] GI:9367116;
           contains Pfam profile PF00795: hydrolase,
           carbon-nitrogen family
          Length = 369

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 523 SGASALEHALKLESDVTNSIREVIKTCESSFN 618
           S  S   H LKL S  T+++R +  +  SSFN
Sbjct: 37  SPRSITSHTLKLPSSSTSALRSISSSMASSFN 68


>At4g30230.1 68417.m04299 hypothetical protein 
          Length = 260

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 488 ITYRAPATRRGRAAHQPSSTPSSWR 562
           + + +PA RR R +  PS +P SWR
Sbjct: 213 VMFPSPANRRARGSRSPSPSP-SWR 236


>At3g56090.1 68416.m06234 ferritin, putative similar to ferritin
           subunit cowpea2 precursor [Vigna unguiculata]
           GI:2970654; contains Pfam profile PF00210: Ferritin-like
           domain
          Length = 259

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 380 LREXFFDAATEEREHATKLIDYLLMRG 460
           L + F +++ EEREHA  L++Y   RG
Sbjct: 130 LAKFFKESSVEEREHAELLMEYQNKRG 156


>At3g19610.1 68416.m02486 hypothetical protein
          Length = 612

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
 Frame = +1

Query: 457 GQADRLRNQPHHVQGPRHTSW-ESGASALEHA-LKLESDVTNSIRE------VIKTCESS 612
           G +D   N  H V+ PR T W  S  S L    L L  ++++ + E      +I +C SS
Sbjct: 131 GLSDIEENYDHQVKKPRRTRWNNSSVSELNFTDLGLSKNLSSVMEEKDDTESMISSCSSS 190

Query: 613 FN 618
           F+
Sbjct: 191 FS 192


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,275,329
Number of Sequences: 28952
Number of extensions: 232739
Number of successful extensions: 575
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 575
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1324661040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)