Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0041
         (677 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0618 + 4577417-4577430,4577838-4577874,4578070-4578173,457...    31   1.1  
12_02_0723 - 22532379-22532902,22533060-22533135,22533195-225333...    28   6.0  
04_04_0751 - 27769616-27769684,27769795-27769917,27769998-277707...    28   7.9  

>07_01_0618 +
           4577417-4577430,4577838-4577874,4578070-4578173,
           4578512-4578707,4579559-4579628,4579849-4579952,
           4580296-4580335,4581016-4581070,4581418-4581426,
           4582026-4582157,4582544-4582613,4583029-4583086,
           4583173-4583228,4583315-4583470,4583589-4583700,
           4583782-4583923,4584141-4584216,4584306-4584401,
           4584509-4584637
          Length = 551

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +3

Query: 219 ENRN*RSQAKRCLDEVFKKYCDKSAQLKGCISSVLQG 329
           E R+   Q KRCL E+    C   AQL+G  +++LQG
Sbjct: 263 ELRDLSLQVKRCLSEIITSLCADLAQLEG--ANILQG 297


>12_02_0723 -
           22532379-22532902,22533060-22533135,22533195-22533380,
           22533459-22534323,22534740-22534918,22535168-22535542
          Length = 734

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +3

Query: 240 QAKRCLDEVFKKYCDKSAQLKGCISSVLQGVRPCVGNEYANHINDAQNSTNQLID 404
           Q K+ L   F  YC  S  L   I+ +L+ +   +  +  +HI++    T QLID
Sbjct: 122 QVKKELKAKFDSYCFVSVSLNPDINKILKNILLQLDEKMYSHIDETW-ETKQLID 175


>04_04_0751 - 27769616-27769684,27769795-27769917,27769998-27770770,
            27771407-27771773,27772104-27772217,27772307-27772403,
            27772968-27773088,27773168-27773252,27773349-27773498,
            27773630-27773746,27773819-27773905,27773981-27774049,
            27774125-27774181,27774266-27774349,27774477-27774513,
            27774721-27774869,27776053-27776538,27776743-27776886,
            27776961-27777509,27778332-27778526,27779226-27779310,
            27779570-27779670,27779689-27780360,27781101-27781433,
            27781957-27782038,27782258-27782334,27782713-27782817,
            27783810-27783944,27784437-27785159,27785882-27786663,
            27787480-27789187
          Length = 2891

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +1

Query: 76   LADDFSQITAVVTSQCTKNNAEDKVPEVEAALRTFGNCLKGLVD 207
            +AD   QI+A V  + T   A +    V+ A  ++G+C+  L +
Sbjct: 1320 MADSNGQISAAVMERLTSAAAAEPYESVKHAFVSYGSCIADLAE 1363


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,197,638
Number of Sequences: 37544
Number of extensions: 362065
Number of successful extensions: 993
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)