Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0040
(712 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF592537-1|ABQ95983.1| 593|Tribolium castaneum beta-N-acetylglu... 27 0.15
U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic pr... 23 1.9
AY531877-1|AAT08872.1| 247|Tribolium castaneum ORF1p protein. 23 3.2
EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine hydroxy... 22 4.3
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 4.3
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 4.3
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 4.3
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 4.3
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 5.7
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 21 7.5
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 21 7.5
>EF592537-1|ABQ95983.1| 593|Tribolium castaneum
beta-N-acetylglucosaminidase NAG2 protein.
Length = 593
Score = 27.1 bits (57), Expect = 0.15
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +3
Query: 261 LVQICKMAQVYPHPASEGCTSASSESAPSDQPIYPDTG 374
L + ++ VYP+ C + E++ SD P +P G
Sbjct: 182 LETLSQLMDVYPNNDGTKCLVVTDEASISDAPFFPHRG 219
>U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic
protein protein.
Length = 372
Score = 23.4 bits (48), Expect = 1.9
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 498 TKEANTIRSGTNTVTKLVEK 557
TK ANTIRS T+ + + EK
Sbjct: 79 TKSANTIRSFTHVESPIDEK 98
>AY531877-1|AAT08872.1| 247|Tribolium castaneum ORF1p protein.
Length = 247
Score = 22.6 bits (46), Expect = 3.2
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 503 RGQHHPIRHKHSHQAGREEE 562
RG+H+ R K + GRE++
Sbjct: 207 RGRHNQSRSKRQPKTGREDQ 226
>EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine
hydroxylase protein.
Length = 532
Score = 22.2 bits (45), Expect = 4.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 627 LCRKMGVTILHCQGANPAFGALVH 698
LC++ GV + G A+G L+H
Sbjct: 408 LCKESGVVKAYGAGLLSAYGELLH 431
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.3
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = -1
Query: 289 TWAILQIWTSHDWLNALTNSKVLWPLLEE-RIHNFLGLN 176
TW L IWT A T + P+ E I LG+N
Sbjct: 475 TWITLHIWTPKCERLARTEKLFVTPMYEGLLIDQSLGMN 513
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.3
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = -1
Query: 289 TWAILQIWTSHDWLNALTNSKVLWPLLEE-RIHNFLGLN 176
TW L IWT A T + P+ E I LG+N
Sbjct: 475 TWITLHIWTPKCERLARTEKLFVTPMYEGLLIDQSLGMN 513
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.3
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = -1
Query: 289 TWAILQIWTSHDWLNALTNSKVLWPLLEE-RIHNFLGLN 176
TW L IWT A T + P+ E I LG+N
Sbjct: 475 TWITLHIWTPKCERLARTEKLFVTPMYEGLLIDQSLGMN 513
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.3
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = -1
Query: 289 TWAILQIWTSHDWLNALTNSKVLWPLLEE-RIHNFLGLN 176
TW L IWT A T + P+ E I LG+N
Sbjct: 475 TWITLHIWTPKCERLARTEKLFVTPMYEGLLIDQSLGMN 513
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.8 bits (44), Expect = 5.7
Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = +3
Query: 300 PASEGC-TSASSESAPSDQPIYPD 368
P + C ASS APS P+ PD
Sbjct: 2279 PENTECHPDASSTMAPSTTPMVPD 2302
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 21.4 bits (43), Expect = 7.5
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = +2
Query: 500 QRGQHHPIRHKHSHQAGREEEGA 568
Q QHH H+ H ++GA
Sbjct: 174 QHPQHHQPHHQQQHMMYGGQQGA 196
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 21.4 bits (43), Expect = 7.5
Identities = 8/23 (34%), Positives = 11/23 (47%)
Frame = +2
Query: 500 QRGQHHPIRHKHSHQAGREEEGA 568
Q QHH H+ H ++GA
Sbjct: 176 QHPQHHQPHHQQQHMMYGGQQGA 198
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,215
Number of Sequences: 336
Number of extensions: 3228
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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