Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0039
         (441 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   0.97 
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   1.7  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   1.7  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   3.0  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   3.0  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   3.0  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    20   9.1  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 0.97
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -2

Query: 386 KCYNIISYYYGL*LDLKFLVFMEIYFVLCN 297
           KCYN+   YY   + + F V   + F+LC+
Sbjct: 49  KCYNLRRIYYFYCVSITFNV--HLLFLLCS 76


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 9/32 (28%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
 Frame = -2

Query: 323 MEIYFVLCNLNNHASKSLHTYFS---FNTNIS 237
           M + +++CN  +HA++ +   F     N N+S
Sbjct: 323 MTLLYIICNEGHHATRKMGPEFRERLLNVNLS 354


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 9/32 (28%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
 Frame = -2

Query: 323 MEIYFVLCNLNNHASKSLHTYFS---FNTNIS 237
           M + +++CN  +HA++ +   F     N N+S
Sbjct: 323 MTLLYIICNEGHHATRKMGPEFRERLLNVNLS 354


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 354 TIIIRDNIVTFNFG*LCYLL 413
           TI IR N + +NF   CY L
Sbjct: 39  TINIRKNGLNYNFTKKCYFL 58


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = -3

Query: 337 NS*FSWKFILFSAI*ITMLVNRYILIFRLILTLV 236
           N  F W F+LF+     +L++    +  LI+ ++
Sbjct: 275 NDIFGWSFLLFTLYSSLLLLDYVSCVVALIILIL 308


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = -3

Query: 337 NS*FSWKFILFSAI*ITMLVNRYILIFRLILTLV 236
           N  F W F+LF+     +L++    +  LI+ ++
Sbjct: 201 NDIFGWSFLLFTLYSSLLLLDYVSCVVALIILIL 234


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 90  CLNFRYINCV*FSDCE 43
           CL+ R IN    +DCE
Sbjct: 358 CLDARMINSKMIADCE 373


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,857
Number of Sequences: 336
Number of extensions: 1838
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9880622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)