Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0038
         (723 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7CPN4 Cluster: Putative uncharacterized protein; n=1; ...    33   5.4  
UniRef50_A5DWT6 Cluster: Putative uncharacterized protein; n=1; ...    33   5.4  
UniRef50_Q0G2N6 Cluster: Putative uncharacterized protein; n=1; ...    33   7.1  
UniRef50_Q73LN1 Cluster: Putative uncharacterized protein; n=1; ...    33   9.4  

>UniRef50_A7CPN4 Cluster: Putative uncharacterized protein; n=1;
           Opitutaceae bacterium TAV2|Rep: Putative uncharacterized
           protein - Opitutaceae bacterium TAV2
          Length = 266

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -1

Query: 501 GGDPANGSN-SFVGFVFIHTGSVNPSLISGSLEAIFI 394
           GG PANGSN SFV F F H    N  L+ G +  + I
Sbjct: 187 GGFPANGSNGSFVTFAFWHGNKANVLLLDGHVGKVGI 223


>UniRef50_A5DWT6 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 1156

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +2

Query: 440 LPVWMKTKPTKEFEPFAGSPPPPKIHSSTYAT 535
           LP  +  KPTK   P + SPPPP   ++T AT
Sbjct: 65  LPELLPPKPTKPLPPPSSSPPPPPTATATAAT 96


>UniRef50_Q0G2N6 Cluster: Putative uncharacterized protein; n=1;
           Fulvimarina pelagi HTCC2506|Rep: Putative
           uncharacterized protein - Fulvimarina pelagi HTCC2506
          Length = 434

 Score = 33.1 bits (72), Expect = 7.1
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
 Frame = +2

Query: 368 SLNCYLN*VINMASSDPEIKDGFTLPVWMKTKPTKEFE-----PFAGSPPPPKIHSSTYA 532
           +++C+ + +  +   DP   DGFTLP W        +E     P  G+ PPP   S  YA
Sbjct: 188 AIDCHASQLGKIIEDDP---DGFTLPDWFLEAQAAPYEIYALAPMPGNVPPPSHFSQLYA 244


>UniRef50_Q73LN1 Cluster: Putative uncharacterized protein; n=1;
           Treponema denticola|Rep: Putative uncharacterized
           protein - Treponema denticola
          Length = 205

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = -3

Query: 478 KFFCWFCLHPYRKCKSIFNFRVTRSHIYNLIQIAI 374
           KF+CWFC    +  + I+N+ + +  I+N +QI +
Sbjct: 14  KFWCWFC----KNSQLIYNYEINQEKIFNELQIQL 44


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 632,366,874
Number of Sequences: 1657284
Number of extensions: 12126975
Number of successful extensions: 31898
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 30677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31859
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)