Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0038
         (723 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0088 + 684471-685154,685271-685834,685938-686222                 29   2.8  
10_01_0318 + 3493913-3496976,3497064-3497392                           29   4.9  
09_06_0071 - 20675501-20675830,20676120-20676286,20676472-206766...    28   8.6  
09_04_0435 - 17545879-17546605,17546721-17546782,17547123-175473...    28   8.6  
04_04_0207 + 23602065-23604315,23604611-23605116                       28   8.6  

>07_01_0088 + 684471-685154,685271-685834,685938-686222
          Length = 510

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +2

Query: 479 EPFAGSPPPPKIHSSTYATLNRIYYLVNPR 568
           +P   SP P ++HSS YA+L     L++PR
Sbjct: 61  DPLGASPAPVRVHSSMYASLR----LISPR 86


>10_01_0318 + 3493913-3496976,3497064-3497392
          Length = 1130

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 14/52 (26%), Positives = 24/52 (46%)
 Frame = -3

Query: 703 GAMPVGGTSWXRLGCVSTQSFSXDDVECPRQRSLPSFRSQARLDYSWVYQII 548
           G +P G   W +L   S +SF  +   C      P  +SQ+  + +W  +I+
Sbjct: 746 GELPAG---WAKLAAQSPESFLGNPQLCVHSSDAPCLKSQSAKNRTWKTRIV 794


>09_06_0071 -
           20675501-20675830,20676120-20676286,20676472-20676619,
           20676768-20677205,20677667-20677741,20678000-20678283,
           20678940-20679159
          Length = 553

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -1

Query: 504 GGGDPANGSNSFVGFVFIHTGSVNPSLISGSL 409
           G   PA+      GF ++H+ S NP++  G+L
Sbjct: 474 GASIPADAKTGCKGFQYLHSTSPNPNVAMGAL 505


>09_04_0435 -
           17545879-17546605,17546721-17546782,17547123-17547335,
           17547506-17547590,17547904-17548061,17548174-17548294,
           17548765-17548927,17548973-17549097,17550800-17550888,
           17550970-17551636,17552671-17552717,17553506-17553862
          Length = 937

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = +1

Query: 556 GKPTNSQDALVNETKEVTAASGIQRRQXRKTGSK 657
           GK  N QDA VNE    T+A     R  R T S+
Sbjct: 254 GKACNIQDATVNENFSKTSAGSSSSRVERSTTSE 287


>04_04_0207 + 23602065-23604315,23604611-23605116
          Length = 918

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = -1

Query: 447 TGSVNPSLISGSLEAIFI 394
           TG V PSL+SG+L A+F+
Sbjct: 482 TGRVPPSLVSGALPAVFL 499


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,562,332
Number of Sequences: 37544
Number of extensions: 324476
Number of successful extensions: 991
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)