Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0038
         (723 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071044-1|AAL48666.1|  179|Drosophila melanogaster RE13279p pro...    30   3.7  
AE014298-2811|AAF48929.1|  179|Drosophila melanogaster CG14193-P...    30   3.7  
BT024227-1|ABC86289.1|  599|Drosophila melanogaster LP09277p pro...    29   6.4  
AE014296-1599|AAF50310.1|  599|Drosophila melanogaster CG4484-PA...    29   6.4  

>AY071044-1|AAL48666.1|  179|Drosophila melanogaster RE13279p
           protein.
          Length = 179

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
 Frame = +2

Query: 452 MKTKPTKEFEPFAGSPPPPK---IHSSTYATLNRI 547
           ++ +PTK+    AGS PPPK   +H+S  A L R+
Sbjct: 44  VQEEPTKDESKEAGSTPPPKHMGVHNSARAELARL 78


>AE014298-2811|AAF48929.1|  179|Drosophila melanogaster CG14193-PA
           protein.
          Length = 179

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
 Frame = +2

Query: 452 MKTKPTKEFEPFAGSPPPPK---IHSSTYATLNRI 547
           ++ +PTK+    AGS PPPK   +H+S  A L R+
Sbjct: 44  VQEEPTKDESKEAGSTPPPKHMGVHNSARAELARL 78


>BT024227-1|ABC86289.1|  599|Drosophila melanogaster LP09277p
           protein.
          Length = 599

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
 Frame = -3

Query: 544 PI*GSVCRRMNLRWGRR----SGERFKFFCWFCLHPYRK 440
           P+ GS+  R  LRWGRR    S   F   C   L PY K
Sbjct: 103 PLLGSISDRCKLRWGRRRPIISILSFGIMCGLILVPYGK 141


>AE014296-1599|AAF50310.1|  599|Drosophila melanogaster CG4484-PA
           protein.
          Length = 599

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
 Frame = -3

Query: 544 PI*GSVCRRMNLRWGRR----SGERFKFFCWFCLHPYRK 440
           P+ GS+  R  LRWGRR    S   F   C   L PY K
Sbjct: 103 PLLGSISDRCKLRWGRRRPIISILSFGIMCGLILVPYGK 141


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,137,975
Number of Sequences: 53049
Number of extensions: 559462
Number of successful extensions: 1598
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1598
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)