Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0037
         (574 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   3.2  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   3.2  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    22   4.3  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   4.3  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   7.5  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   9.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.9  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   9.9  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 282 LLLDVSPTKFVFLAQTPFVKVIDLEGTVDV 371
           + L +  T F FLA+   +K  D+   VDV
Sbjct: 99  MALTLIVTLFTFLARGTLIKSFDMLSHVDV 128


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 282 LLLDVSPTKFVFLAQTPFVKVIDLEGTVDV 371
           + L +  T F FLA+   +K  D+   VDV
Sbjct: 99  MALTLIVTLFTFLARGTLIKSFDMLSHVDV 128


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +1

Query: 52  DKKKQGHKTSVRYL 93
           DK+KQG KT +++L
Sbjct: 79  DKQKQGAKTVIQHL 92


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 22/91 (24%), Positives = 33/91 (36%)
 Frame = +1

Query: 10  DSPYIFSGEACLDLDKKKQGHKTSVRYLINISNNRNQEAIAAEIGFFHPRLDKEVVIKSN 189
           D  Y    E    +DK+++      RY   ++    +EA+  E      R   EV   SN
Sbjct: 117 DLSYACREEKNCIIDKRQRNRCQYCRYQKCLNMGMKREAVQEERQRTKDRDTSEVESTSN 176

Query: 190 AVFKVPEPNRYILESSVSLCHSLSALIASPN 282
               +P       E  V     L AL+ + N
Sbjct: 177 LQADMPLERIIEAEKRVECNDPLVALVVNEN 207


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 6/27 (22%), Positives = 14/27 (51%)
 Frame = -1

Query: 493 SASSVVNSKYWKSFARAWTLTSLPSRS 413
           S   ++ SK+W +  + W+   +  R+
Sbjct: 129 SIQFIIISKHWVTIMKEWSFMEMSMRN 155


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 468 NTGSLSPEPGR*PPC 424
           NT  +  +P R PPC
Sbjct: 149 NTCDIDNDPNRAPPC 163


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 295  TSNNSLETRSAPRESDI 245
            T+ NSL  +  P ESD+
Sbjct: 1407 TTTNSLTFKLKPHESDV 1423


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund
          protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 79 RSCVPVSSYPGR 44
          R C   SS+PGR
Sbjct: 29 RDCTTASSWPGR 40


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,140
Number of Sequences: 336
Number of extensions: 2837
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)