Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0037
         (574 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0137 - 31937541-31939892                                         36   0.023
03_01_0250 - 1937650-1939071,1939375-1939468,1939665-1939870,193...    29   2.6  
07_01_0115 + 851505-852368,852611-852730,853000-853020,853253-85...    29   3.5  
02_05_0352 + 28240913-28241362                                         29   3.5  
06_01_0090 - 724296-724532,724756-724938,725038-725088,725520-72...    27   8.0  
01_06_1793 - 39916024-39916824                                         27   8.0  

>03_06_0137 - 31937541-31939892
          Length = 783

 Score = 35.9 bits (79), Expect = 0.023
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
 Frame = +1

Query: 61  KQGHKTSVRYLINISNNRNQEAIAAEIGFFHP--RLDKEVVIKSNAVFKVPEPNRYILES 234
           K G   S R +  + NNR+  A  A I  +    R D+ + +  + +   PEPN Y L +
Sbjct: 356 KIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAA 415

Query: 235 SVSLCHSLSAL 267
            +S+C SL+ L
Sbjct: 416 VLSVCASLACL 426


>03_01_0250 -
           1937650-1939071,1939375-1939468,1939665-1939870,
           1939986-1940132
          Length = 622

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 23/93 (24%), Positives = 41/93 (44%)
 Frame = +3

Query: 171 GSHQVERSLQGPGTKSIYSRIISQPMSLSLGADRVSKLLLDVSPTKFVFLAQTPFVKVID 350
           G H++  S     T  ++  II+  + L+  + R   LL DV   +  F      + + D
Sbjct: 332 GLHKLRVSHGSQFTDLVFHDIIATSLCLTHVSLRWCNLLTDVGIERLSFNKDLNVLDLRD 391

Query: 351 LEGTVDVQSKAKTQQAKLRFKLLEGKEVSVQAL 449
                D   ++ +   KL+   L+G ++S QAL
Sbjct: 392 CRSLGDEAVRSLSCLPKLQILFLDGSDISDQAL 424


>07_01_0115 +
           851505-852368,852611-852730,853000-853020,853253-853369,
           853466-853555,853730-853837,853897-853932,853933-854022
          Length = 481

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -3

Query: 221 YRFGSGTLKTAFDLMTTSLSSLGWKNPISAAIAS 120
           +R G  T   AFD MT   +S+   NP+ AA++S
Sbjct: 72  FRGGVATRSVAFDEMTPRRASVDVPNPLRAALSS 105


>02_05_0352 + 28240913-28241362
          Length = 149

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
 Frame = +2

Query: 35  RPASTWIRRNRDTRPLLDTSS----TSP-IIGIRKLLQPKSDSSTQDLI 166
           R  STW   +R +RP + T+S    T P ++G+RK  +P+ +  T +L+
Sbjct: 73  RTCSTWTSLSRTSRPTMATTSGVVKTLPELVGLRK--EPRWEDKTTELL 119


>06_01_0090 -
           724296-724532,724756-724938,725038-725088,725520-725639,
           725738-725840,726106-726264,726728-726846,726891-727004,
           727119-727277,727404-727451,728464-728640,729064-729116,
           729549-729661,729793-729873,729966-730081,730786-730905,
           732321-732429,732593-732770,732852-732920,733102-733233,
           733657-733766,733843-734003,734081-734171,734258-734355,
           734499-734619,734732-734892,734985-735090,735142-735236,
           735828-735852,736008-736084,736196-736282,736372-736421,
           736558-736639,736735-736795,737064-737116,737206-737395,
           737472-737595,737860-737962,738064-738156,740344-740422,
           740508-740584,740915-741043,742614-742731,742816-742913,
           743457-743546,744998-745123,745238-745351,745488-745611,
           745865-746019,746104-746201,746357-746600
          Length = 1926

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
 Frame = -1

Query: 535 SLFRDQMTDI-ESLRSASSVVNSKYWKSFARAWTLTSLPSRSLNLNLACWVFALL 374
           S+F     DI +SLR    + NS   K   R   L  +PS   NL L  W   LL
Sbjct: 809 SIFSPFWNDIIKSLREEDYISNSIMTKFSFREMDLLMMPSNCGNLRLVQWPLFLL 863


>01_06_1793 - 39916024-39916824
          Length = 266

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +1

Query: 448 WRKTSSISSSQQKRQTASSLCRSF-GPGKESRYNR 549
           W+K+S  SSS   +  A S   SF G G + RY R
Sbjct: 4   WKKSSGKSSSSSSQYYAGSDSSSFAGGGGDDRYGR 38


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,755,229
Number of Sequences: 37544
Number of extensions: 327199
Number of successful extensions: 816
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1328870592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)