Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0037
         (574 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98801-1|CAA67333.1| 1263|Homo sapiens dynactin protein.               30   5.0  
BC071583-1|AAH71583.1| 1139|Homo sapiens DCTN1 protein protein.        30   5.0  
AF086947-1|AAD03694.1| 1261|Homo sapiens dynactin 1 protein.           30   5.0  
AF064205-2|AAD55812.1| 1144|Homo sapiens dynactin 1 p135 isoform...    30   5.0  
AF064205-1|AAD55811.1| 1278|Homo sapiens dynactin 1 p150 isoform...    30   5.0  
AB209625-1|BAD92862.1|  459|Homo sapiens dynactin 1 isoform 1 va...    30   5.0  

>X98801-1|CAA67333.1| 1263|Homo sapiens dynactin protein.
          Length = 1263

 Score = 30.3 bits (65), Expect = 5.0
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = +3

Query: 345 IDLEGTVDVQSKAKTQQAKLRFKLLEGKEVSVQALAKDFQYFEFTTEEAD 494
           I LE   + +SK + QQA L+ +L E ++ + +AL    +Y E   + AD
Sbjct: 238 IQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMADTAD 287


>BC071583-1|AAH71583.1| 1139|Homo sapiens DCTN1 protein protein.
          Length = 1139

 Score = 30.3 bits (65), Expect = 5.0
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = +3

Query: 345 IDLEGTVDVQSKAKTQQAKLRFKLLEGKEVSVQALAKDFQYFEFTTEEAD 494
           I LE   + +SK + QQA L+ +L E ++ + +AL    +Y E   + AD
Sbjct: 119 IQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMADTAD 168


>AF086947-1|AAD03694.1| 1261|Homo sapiens dynactin 1 protein.
          Length = 1261

 Score = 30.3 bits (65), Expect = 5.0
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = +3

Query: 345 IDLEGTVDVQSKAKTQQAKLRFKLLEGKEVSVQALAKDFQYFEFTTEEAD 494
           I LE   + +SK + QQA L+ +L E ++ + +AL    +Y E   + AD
Sbjct: 236 IQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMADTAD 285


>AF064205-2|AAD55812.1| 1144|Homo sapiens dynactin 1 p135 isoform
           protein.
          Length = 1144

 Score = 30.3 bits (65), Expect = 5.0
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = +3

Query: 345 IDLEGTVDVQSKAKTQQAKLRFKLLEGKEVSVQALAKDFQYFEFTTEEAD 494
           I LE   + +SK + QQA L+ +L E ++ + +AL    +Y E   + AD
Sbjct: 119 IQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMADTAD 168


>AF064205-1|AAD55811.1| 1278|Homo sapiens dynactin 1 p150 isoform
           protein.
          Length = 1278

 Score = 30.3 bits (65), Expect = 5.0
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = +3

Query: 345 IDLEGTVDVQSKAKTQQAKLRFKLLEGKEVSVQALAKDFQYFEFTTEEAD 494
           I LE   + +SK + QQA L+ +L E ++ + +AL    +Y E   + AD
Sbjct: 253 IQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMADTAD 302


>AB209625-1|BAD92862.1|  459|Homo sapiens dynactin 1 isoform 1
           variant protein.
          Length = 459

 Score = 30.3 bits (65), Expect = 5.0
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = +3

Query: 345 IDLEGTVDVQSKAKTQQAKLRFKLLEGKEVSVQALAKDFQYFEFTTEEAD 494
           I LE   + +SK + QQA L+ +L E ++ + +AL    +Y E   + AD
Sbjct: 78  IQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMADTAD 127


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,578,414
Number of Sequences: 237096
Number of extensions: 1820416
Number of successful extensions: 4078
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4078
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)