Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0036
         (617 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    29   0.024
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   4.7  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 29.5 bits (63), Expect = 0.024
 Identities = 13/73 (17%), Positives = 27/73 (36%)
 Frame = +2

Query: 359 IHWMASWDTEISFKETWIHRETFFRAGLAAVASFVAGXVNPVEISERLGYLLKGNGSKNP 538
           I W  + D    +   WI  E+ +   ++ V+      +  + + E     +      +P
Sbjct: 182 IKWSPNEDYSCEYNLVWIKEESIYEERISVVSGLHEATLTDLALGENYTVQIMAKSESSP 241

Query: 539 VEGMALASAFSTP 577
            E +  +  F TP
Sbjct: 242 FESLKKSLNFRTP 254


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = -2

Query: 271  VCPIPNIFEGSFTHLPGPPSR 209
            VC  P   EG   H   PP++
Sbjct: 959  VCDWPENVEGCMQHTAAPPTK 979


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,934
Number of Sequences: 336
Number of extensions: 2707
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)