Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0036
         (617 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    87   1e-19
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    87   1e-19
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    25   0.45 
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    24   1.0  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   2.4  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   2.4  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    23   3.2  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    23   3.2  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   3.2  

>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 87.4 bits (207), Expect = 1e-19
 Identities = 39/41 (95%), Positives = 40/41 (97%)
 Frame = +3

Query: 84  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEQ 206
           MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIE+
Sbjct: 1   MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 41



 Score = 35.1 bits (77), Expect = 6e-04
 Identities = 24/65 (36%), Positives = 30/65 (46%)
 Frame = +1

Query: 205 KFEKEAQANG*RILQICWVLDKLKG*AXSVAYHNSILXXLEVXKTSK*LCYHSLDGFLGH 384
           KFEKEAQ  G    +  WVLDKLK           I   + + K      Y ++    GH
Sbjct: 41  KFEKEAQEMGKGSFKYAWVLDKLK-----AERERGITIDIALWKFETAKYYVTIIDAPGH 95

Query: 385 RDFIQ 399
           RDFI+
Sbjct: 96  RDFIK 100


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 87.4 bits (207), Expect = 1e-19
 Identities = 39/41 (95%), Positives = 40/41 (97%)
 Frame = +3

Query: 84  MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEQ 206
           MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIE+
Sbjct: 1   MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 41



 Score = 35.1 bits (77), Expect = 6e-04
 Identities = 24/65 (36%), Positives = 30/65 (46%)
 Frame = +1

Query: 205 KFEKEAQANG*RILQICWVLDKLKG*AXSVAYHNSILXXLEVXKTSK*LCYHSLDGFLGH 384
           KFEKEAQ  G    +  WVLDKLK           I   + + K      Y ++    GH
Sbjct: 41  KFEKEAQEMGKGSFKYAWVLDKLK-----AERERGITIDIALWKFETSKYYVTIIDAPGH 95

Query: 385 RDFIQ 399
           RDFI+
Sbjct: 96  RDFIK 100


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 96  KTHINIVVIGHVDSGKST 149
           K H  + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = +3

Query: 105 INIVVIGHVDSGKST 149
           INI  IGHV  GKST
Sbjct: 43  INIGTIGHVAHGKST 57


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -2

Query: 97  FSLPIFG*SRITNCV*Y 47
           FSLPIFG   I +C+ Y
Sbjct: 57  FSLPIFGTRWIFSCIGY 73


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -3

Query: 567 KAEAKAMPSTGFFEPFPLRR*PSLSEIST 481
           K E K + ST    P PL R PS+   S+
Sbjct: 550 KQELKRLKSTVSLLPLPLARTPSVMSASS 578


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 427 EGFPVNPCFLE 395
           EG+P NPC  E
Sbjct: 115 EGYPFNPCLTE 125


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 427 EGFPVNPCFLE 395
           EG+P NPC  E
Sbjct: 131 EGYPFNPCLTE 141


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 6/29 (20%), Positives = 18/29 (62%)
 Frame = +2

Query: 332 RKLASNYVTIHWMASWDTEISFKETWIHR 418
           R+  +N++++ W ++W      K+ ++H+
Sbjct: 158 RQPPNNWLSVFWGSAWQWNEERKQYYLHQ 186


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,870
Number of Sequences: 438
Number of extensions: 3031
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)