Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0035
(665 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 62 7e-11
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 52 1e-07
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 48 1e-06
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 41 1e-04
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 38 0.002
SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces ... 37 0.002
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 37 0.003
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 29 0.60
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 28 1.4
SPCC306.03c |cnd2||condensin subunit Cnd2|Schizosaccharomyces po... 27 2.4
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 4.2
SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyce... 26 5.6
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 26 5.6
SPAPB1A11.04c |||transcription factor |Schizosaccharomyces pombe... 25 7.4
SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 9.8
SPCC330.08 |alg11|gmd3|alpha-1,2-mannosyltransferase Alg11|Schiz... 25 9.8
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 62.1 bits (144), Expect = 7e-11
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = +2
Query: 275 EESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTG 451
E+ I L +VD T+E DL Y +RGYPTL F+NG I YSG R+ D ++ +++K+
Sbjct: 69 EKDGISLVEVDCTEEGDLCSEYSIRGYPTLNVFKNGKQISQYSGPRKHDALVKYMRKQL- 127
Query: 452 PPAVEVTSAEQAKELIDANLLLYLVSF 532
P V+ S + + ++ L +V+F
Sbjct: 128 LPTVKPISKDTLENFVEKADDLAVVAF 154
Score = 60.1 bits (139), Expect = 3e-10
Identities = 24/50 (48%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = +3
Query: 123 TEENVLVLSKANFETVI-STTEYILVEFYAPWCGHCKSLAPEYAKQQQSW 269
++E+++VL NF+ ++ T+ +LVEFYAPWCGHCK+LAP Y K + +
Sbjct: 353 SQEDLVVLVADNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEY 402
Score = 52.0 bits (119), Expect = 7e-08
Identities = 18/35 (51%), Positives = 27/35 (77%)
Frame = +3
Query: 144 LSKANFETVISTTEYILVEFYAPWCGHCKSLAPEY 248
++K +I+ + ++V+FYAPWCGHCK+LAPEY
Sbjct: 27 VNKEGLNELITADKVLMVKFYAPWCGHCKALAPEY 61
Score = 41.9 bits (94), Expect = 8e-05
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 6/66 (9%)
Frame = +2
Query: 263 KLAEE---ESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNG---SPIDYSGGRQADDI 424
KLAEE +S + +AK+DAT E D++ S + G+PT+ FF+ +P+ Y G R +D+
Sbjct: 397 KLAEEYSDDSNVVVAKIDAT-ENDISVS--ISGFPTIMFFKANDKVNPVRYEGDRTLEDL 453
Query: 425 ISWLKK 442
+++ K
Sbjct: 454 SAFIDK 459
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 51.6 bits (118), Expect = 1e-07
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Frame = +2
Query: 266 LAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF-RNGS-PIDYSGGRQADDIISWLK 439
L E+ + + + K+DA D+A+ Y + G+PTL +F +GS P+ YS R D + ++
Sbjct: 67 LFEDHNDVLIGKIDADTHSDVADKYHITGFPTLIWFPPDGSEPVQYSNARDVDSLTQFVS 126
Query: 440 KKTGPPAVEVTSAEQAKELIDAN 508
+KTG ++ EL N
Sbjct: 127 EKTGIKKRKIVLPSNVVELDSLN 149
Score = 48.8 bits (111), Expect = 7e-07
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = +3
Query: 132 NVLVLSKANFETVISTTEY-ILVEFYAPWCGHCKSLAPEY 248
NV+ L NF+ V+ + +LVEFYA WCG+CK LAP Y
Sbjct: 141 NVVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTY 180
Score = 46.4 bits (105), Expect = 4e-06
Identities = 24/61 (39%), Positives = 33/61 (54%)
Frame = +3
Query: 66 VLIFTAIALLGLALGDEVPTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPE 245
+L F AL L V +++ L T+ ++ + L+EFYA WCGHCKSLAP
Sbjct: 5 LLSFVIFALFALVFASGVVELQSLNELEN----TIRASKKGALIEFYATWCGHCKSLAPV 60
Query: 246 Y 248
Y
Sbjct: 61 Y 61
Score = 39.9 bits (89), Expect = 3e-04
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +2
Query: 263 KLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF---RNGSPIDYSGGRQADDIISW 433
K+ + E +++ K++A D+ + V +PT+KFF P Y G R + +I +
Sbjct: 185 KVFKNEPNVEIVKINADVFADIGRLHEVASFPTIKFFPKDDKDKPELYEGDRSLESLIEY 244
Query: 434 LKKKTG 451
+ KK+G
Sbjct: 245 INKKSG 250
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 48.0 bits (109), Expect = 1e-06
Identities = 22/62 (35%), Positives = 28/62 (45%)
Frame = +3
Query: 69 LIFTAIALLGLALGDEVPTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEY 248
L +L+ G N + L+ NF + LV FYAPWCG+CK L P Y
Sbjct: 11 LFLACFSLVSGVFGYSPMFGSNTIELNSKNFRKFVKAKGPSLVVFYAPWCGYCKKLVPTY 70
Query: 249 AK 254
K
Sbjct: 71 QK 72
Score = 30.3 bits (65), Expect = 0.26
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Frame = +2
Query: 284 PIKLAKVDATQEQDLAESYGVRGYPTLKFF---RNGSPI---DYSGGRQADDIISWLKKK 445
P+ DA Q + + Y V+G+PT+K GS + DY+G R + ++
Sbjct: 82 PVTAVDCDADQNRAVCSQYQVQGFPTIKLVYPSSKGSSLSSTDYNGDRSYKSLQKFVSDS 141
Query: 446 TGPPAVEVTSAE 481
P V++ ++E
Sbjct: 142 I-PSKVKILTSE 152
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 41.1 bits (92), Expect = 1e-04
Identities = 12/36 (33%), Positives = 26/36 (72%)
Frame = +3
Query: 141 VLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEY 248
V + F++++ + ++V+F+A WCG CK++AP++
Sbjct: 5 VSDSSEFKSIVCQDKLVVVDFFATWCGPCKAIAPKF 40
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 299 KVDATQEQDLAESYGVRGYPTLKFFRNGSPID 394
KVD Q ++A GV P+ ++NG I+
Sbjct: 54 KVDVDQLSEIAAEAGVHAMPSFFLYKNGEKIE 85
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 37.5 bits (83), Expect = 0.002
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +3
Query: 141 VLSKANFETVISTTEYILVEFYAPWCGHCKSLAP 242
V S ++ T IS + +V+FYA WCG CK L P
Sbjct: 22 VESFGDYNTRISADKVTVVDFYADWCGPCKYLKP 55
Score = 36.3 bits (80), Expect = 0.004
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +2
Query: 263 KLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKK 442
KL+E+ V+A + D+A+ GV PT+ FR G +D G + S L K
Sbjct: 59 KLSEQNQKASFIAVNADKFSDIAQKNGVYALPTMVLFRKGQELDRIVGADVKTLSSLLAK 118
>SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 632
Score = 37.1 bits (82), Expect = 0.002
Identities = 17/88 (19%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +2
Query: 287 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGPPAVE 466
+K+A+V+ +E+++ + ++ +PT + F+ I Y+G + ++S+ + A++
Sbjct: 230 LKMAQVNCDEEKEMCNHFHIKKFPTFRVFQGFDSIQYNGPLKYQQLLSYSNQVASYQAIK 289
Query: 467 VTSAE-QAKELIDANLLLYLVSFRTRAQ 547
+ + ++ E L L F T ++
Sbjct: 290 IEEGDIESIENSHPVFFLVLYDFATTSE 317
Score = 28.3 bits (60), Expect = 1.1
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Frame = +2
Query: 326 LAESYGVRGYPTLKFFRNGSPIDYSG--GRQADD---IISWLKKKTGPPAVEVT 472
LA YG + P++ RNG PI Y R+ D I W+ + P E+T
Sbjct: 343 LANKYGAQSQPSIIAVRNGMPIVYQAITPREFRDYKRITEWINIVSSPFITELT 396
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 36.7 bits (81), Expect = 0.003
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Frame = +2
Query: 251 QAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGR--QA--D 418
Q A+K A + AKV+ +++ +A GV+ PT FF NG ID G QA +
Sbjct: 43 QLASKYASPK--FVFAKVNVDEQRQIASGLGVKAMPTFVFFENGKQIDMLTGANPQALKE 100
Query: 419 DIISWLKKKTGPPAVEVTSAEQAK 490
+ K TG A+ +S+ K
Sbjct: 101 KVALISSKATGTGALASSSSAPVK 124
Score = 34.7 bits (76), Expect = 0.012
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +3
Query: 141 VLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAK 254
+ S ++ + I + Y+ V+ YA WCG CK+++P +++
Sbjct: 6 IRSYQHWISTIPKSGYLAVDCYADWCGPCKAISPLFSQ 43
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 29.1 bits (62), Expect = 0.60
Identities = 10/52 (19%), Positives = 28/52 (53%)
Frame = +2
Query: 287 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKK 442
+ +A ++ + + Y ++ +PT FF+ + ++Y G D++S+ ++
Sbjct: 331 LNVAHINCAVSKRACKQYSIQYFPTFLFFKEEAFVEYVGLPNEGDLVSFAEE 382
Score = 26.2 bits (55), Expect = 4.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 144 LSKANFETVISTTEYILVEFYAPWCGHCKSLAP 242
L+ + E+ +S + +++Y P CG CK L P
Sbjct: 31 LTDNDLESEVSKGTWF-IKYYLPSCGACKRLGP 62
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 27.9 bits (59), Expect = 1.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 183 EYILVEFYAPWCGHCKSL 236
+ IL+ FYAPW CK +
Sbjct: 21 QIILLNFYAPWAAPCKQM 38
Score = 25.0 bits (52), Expect = 9.8
Identities = 17/98 (17%), Positives = 36/98 (36%)
Frame = +2
Query: 200 ILCSMVRPLQISGTGIRQAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRN 379
IL + P + Q + A++ K++A + D+AES+ V P
Sbjct: 23 ILLNFYAPWAAPCKQMNQVFDQFAKDTKNAVFLKIEAEKFSDIAESFDVNAVPLFVLIHG 82
Query: 380 GSPIDYSGGRQADDIISWLKKKTGPPAVEVTSAEQAKE 493
+ G + + + + P +++S + E
Sbjct: 83 AKVLARISGANPQKLKAAIDEYIQPLISQISSTNASVE 120
>SPCC306.03c |cnd2||condensin subunit Cnd2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 742
Score = 27.1 bits (57), Expect = 2.4
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -2
Query: 490 FSLFSRGNLNSRGASLLLQPTDDVISLTTT*IVDRT 383
F S+GNL+ SLL +D+V +TTT +VD T
Sbjct: 304 FEFDSKGNLD---VSLLKSLSDEVNMITTTSLVDNT 336
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 26.2 bits (55), Expect = 4.2
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -3
Query: 378 FLKNLRVGYPR-TP*LSARSCS*VASTFASLIGDSSSASFVAAW 250
+++ L V R +P + R+C+ +A+ + L D +ASFV+ W
Sbjct: 1133 WIRRLGVALLRESPSHALRACAALAAAYQPLARDLFNASFVSCW 1176
>SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 747
Score = 25.8 bits (54), Expect = 5.6
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -1
Query: 68 NTHCDIIGTFLL 33
NTHCDI+ +FLL
Sbjct: 275 NTHCDIVTSFLL 286
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 25.8 bits (54), Expect = 5.6
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +1
Query: 130 KMCSF*VKLTLKL*FQPRSTF*LNSMLHGAATANLWHRNTP 252
K +F L QP T N +L+ + NLW R+ P
Sbjct: 620 KSANFDFSFLKSLDLQPTITLGKNDLLNAILSQNLWFRSLP 660
>SPAPB1A11.04c |||transcription factor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 697
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -3
Query: 651 SSSALQLLDHFLIADNSKYLVIN 583
SSS L +DH ++ D SKY IN
Sbjct: 533 SSSRLVHVDHQILQDRSKYWKIN 555
>SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 977
Score = 25.0 bits (52), Expect = 9.8
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +2
Query: 212 MVRPLQISGTGIRQAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSP 388
+ R SG L+++ +K D+T Q+L ES G YP++ FF P
Sbjct: 635 LARASLTSGLKSNNTLRALSQDLKNCAKSKDDSTT-QNLTESLGSVCYPSMPFFNQYVP 692
>SPCC330.08 |alg11|gmd3|alpha-1,2-mannosyltransferase
Alg11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 471
Score = 25.0 bits (52), Expect = 9.8
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 389 IDYSGGRQADDIISWLKKKTGPPAVEVTSAEQA 487
++ SGG + D +I W+ K TG A ++ +A
Sbjct: 389 VNNSGGPKFDIVIPWIGKPTGFHASTISEYAEA 421
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,545,989
Number of Sequences: 5004
Number of extensions: 47241
Number of successful extensions: 140
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 139
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 303841898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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