Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0034
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    25   0.77 
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   4.1  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   4.1  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    21   9.5  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   9.5  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      21   9.5  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      21   9.5  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
 Frame = +1

Query: 322 RQPSNRIGVGSLYGLMVFCTS----KLEVCYIEANGFYLGKLRGL---LGDGN 459
           R+P NRI   +  G +V C++      ++ ++ ++G  +G + GL   L +GN
Sbjct: 27  REPPNRIDFSNTTGAVVECSAHGNPTPDIIWVRSDGTAVGDVPGLRQVLANGN 79


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -1

Query: 342 DSVAWLTESEHILFDDRESFGSSVQNSLSISFNSMILRSY 223
           + V W+  +   ++D  ES GSS    LS +   + LR++
Sbjct: 292 EDVRWVMIALRQMYDRGESKGSSCYRLLSRNGQFIYLRTF 331


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 187 FKTENPRLLFWKIR 228
           +K ENP +  W+IR
Sbjct: 124 YKRENPSIFSWEIR 137


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 290 NPLEAPFRIACPFL 249
           NPL +P R+A P L
Sbjct: 111 NPLPSPRRVAVPVL 124


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +1

Query: 235 YHRIERNGQAILNGASKGFPIIEKDVFA 318
           +HR        LNG ++G P   K + A
Sbjct: 208 FHRAIAQSGCALNGFARGIPDTSKQLAA 235


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +1

Query: 235 YHRIERNGQAILNGASKGFPIIEKDVFA 318
           +HR        LNG ++G P   K + A
Sbjct: 206 FHRAIAQSGCALNGFARGIPDTSKQLAA 233


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +1

Query: 235 YHRIERNGQAILNGASKGFPIIEKDVFA 318
           +HR        LNG ++G P   K + A
Sbjct: 208 FHRAIAQSGCALNGFARGIPDTSKQLAA 235


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,276
Number of Sequences: 336
Number of extensions: 3082
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)