Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0031
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   5.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.7  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   7.7  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -3

Query: 309 LLMATSNGSYRVQTF*ANYFLVLHKNLCGFLIA 211
           L+   S   + V+TF A  F  + KNL   LIA
Sbjct: 721 LIKFISIAKHNVRTFSAGGFFDIRKNLIFSLIA 753


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +3

Query: 618 VGHAGEPREQIRANAEEVLPGVVQLEAECAHERA 719
           V  AGE   +I  N  E++  +     +  +ERA
Sbjct: 660 VSKAGELIHKIETNDHEIIDKIEMFSLQILNERA 693


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -3

Query: 477 CENSNSSIPYFFMK 436
           CEN+++ + +FF K
Sbjct: 172 CENNSTGVEHFFKK 185


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,969
Number of Sequences: 336
Number of extensions: 3472
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)