Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0030
(662 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026213-7|AAB71308.2| 151|Caenorhabditis elegans Tetra thymosi... 50 1e-06
AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical ... 33 0.18
Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical pr... 31 0.55
U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin pro... 31 0.55
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 29 2.2
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 29 3.9
AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical... 29 3.9
AC006790-7|AAF60731.1| 547|Caenorhabditis elegans Suppressor of... 29 3.9
Z48009-5|CAA88086.1| 329|Caenorhabditis elegans Hypothetical pr... 28 5.1
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 28 6.8
U00048-14|AAB53834.1| 270|Caenorhabditis elegans Hypothetical p... 28 6.8
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 28 6.8
Z81495-5|CAB04059.1| 178|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z54216-6|CAB76416.2| 319|Caenorhabditis elegans Hypothetical pr... 27 9.0
AF047653-2|AAC04459.1| 388|Caenorhabditis elegans Hypothetical ... 27 9.0
AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical... 27 9.0
AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical... 27 9.0
AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical ... 27 9.0
AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical ... 27 9.0
>AF026213-7|AAB71308.2| 151|Caenorhabditis elegans Tetra thymosin
(four thymosin repeatprotein) protein 1 protein.
Length = 151
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/48 (47%), Positives = 30/48 (62%)
Frame = +3
Query: 279 QLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEK 422
+LK ET EKN LP K+ VA EK H + +EHFD T++ T +EK
Sbjct: 23 ELKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHFDSTKLHSTPVKEK 70
Score = 50.0 bits (114), Expect = 1e-06
Identities = 26/61 (42%), Positives = 33/61 (54%)
Frame = +3
Query: 249 IRGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNP 428
I IE FDS++L T +EK LP D + EK H L D + +F +K T T EKN
Sbjct: 51 IHEIEHFDSTKLHSTPVKEKIVLPSADDIKQEKQHLELTDKINNFPSENLKKTETIEKNV 110
Query: 429 L 431
L
Sbjct: 111 L 111
Score = 37.1 bits (82), Expect = 0.011
Identities = 23/52 (44%), Positives = 25/52 (48%)
Frame = +3
Query: 258 IEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTT 413
I F S LK TET EKN LP VA EK L FDK+ + H T
Sbjct: 92 INNFPSENLKKTETIEKNVLPSPTDVAREKT----LQMAASFDKSALHHVET 139
Score = 34.3 bits (75), Expect = 0.078
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 97 PSLKDLP--KVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFEVSRSL 270
PS D+ K +L ++ F + L+ +T EK VLPS DVA EKT + +S
Sbjct: 74 PSADDIKQEKQHLELTDKINNFPSENLKKTETIEKNVLPSPTDVAREKTLQMAASFDKSA 133
Query: 271 I 273
+
Sbjct: 134 L 134
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +1
Query: 100 SLKDLPKVATDLKSQL-EGFNTSCLRDVDTNEKIVLPSAEDVATEK 234
++ +LPK+ +L + EG L+ V+T EK VLP+ EDVA EK
Sbjct: 3 AVTELPKMNQELAGAVREGLE---LKKVETTEKNVLPTKEDVAEEK 45
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 142 QLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSL 249
++E F+++ L EKIVLPSA+D+ EK L
Sbjct: 53 EIEHFDSTKLHSTPVKEKIVLPSADDIKQEKQHLEL 88
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 509 LKHTETCEKNPLPTKDVIEQEK 574
LK ET EKN LPTK+ + +EK
Sbjct: 24 LKKVETTEKNVLPTKEDVAEEK 45
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +2
Query: 389 DSDEAHDDGRKESTAPDRSYRSGEGKE--QIPERHRELRSH*LKHTETCEKNPLPTKDVI 562
DS + H KE + + K+ ++ ++ S LK TET EKN LP+ +
Sbjct: 58 DSTKLHSTPVKEKIVLPSADDIKQEKQHLELTDKINNFPSENLKKTETIEKNVLPSPTDV 117
Query: 563 EQEKS 577
+EK+
Sbjct: 118 AREKT 122
>AF106592-4|AAK21366.1| 786|Caenorhabditis elegans Hypothetical
protein D1037.1 protein.
Length = 786
Score = 33.1 bits (72), Expect = 0.18
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Frame = +2
Query: 293 RDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDS--DEAHDDGRKESTAPDRSYRSGEGK 466
+D + +R+ + S + GR RT ++ + D R +P+RS RS E +
Sbjct: 233 KDKNRKKEKTERKRKRSHSSSDRRGR-RTSKESRRRSRSRDTHRTRRRSPERSRRSTETR 291
Query: 467 EQIPER--HRELRSH*LKHTETCEKNPLPTKDVIEQEK 574
+ PER RS K ++ + +++VI++EK
Sbjct: 292 NERPERPSRWRSRSRERKEYDSYRRRRSRSREVIDKEK 329
>Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical
protein F33A8.1 protein.
Length = 897
Score = 31.5 bits (68), Expect = 0.55
Identities = 29/87 (33%), Positives = 40/87 (45%)
Frame = +2
Query: 293 RDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQ 472
+D G++ RS E+ P P RS+ R+ E+ + S +P RS S +
Sbjct: 69 KDDGDDQPGTPNSYRSRETSPAP-KRSKETRE--SESPEKSPVRSRSPRRS--SARSPSR 123
Query: 473 IPERHRELRSH*LKHTETCEKNPLPTK 553
P R RE RS K +E E PLP K
Sbjct: 124 SPRRRRE-RSSERKQSE--EPAPLPEK 147
>U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin
protein.
Length = 897
Score = 31.5 bits (68), Expect = 0.55
Identities = 29/87 (33%), Positives = 40/87 (45%)
Frame = +2
Query: 293 RDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQ 472
+D G++ RS E+ P P RS+ R+ E+ + S +P RS S +
Sbjct: 69 KDDGDDQPGTPNSYRSRETSPAP-KRSKETRE--SESPEKSPVRSRSPRRS--SARSPSR 123
Query: 473 IPERHRELRSH*LKHTETCEKNPLPTK 553
P R RE RS K +E E PLP K
Sbjct: 124 SPRRRRE-RSSERKQSE--EPAPLPEK 147
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
mutant phenotypeprotein 1 protein.
Length = 4177
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +2
Query: 284 EAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKE 424
E + E+ + R E PEPL R D DE DDG ++
Sbjct: 2493 EDEEEEAEDDDQDEDDVRHVEQNPEPLARRLFEEDDDDEEDDDGDED 2539
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 28.7 bits (61), Expect = 3.9
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 11/89 (12%)
Frame = +2
Query: 305 EEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGR-----------KESTAPDRSYR 451
E+ AS Q+ E P +P ++ +D DE D +ES++ D R
Sbjct: 393 EDEASAQK-----EKPKKPATKASDADEDDDEESSDEESDEESEDSEESEESSSDDDEDR 447
Query: 452 SGEGKEQIPERHRELRSH*LKHTETCEKN 538
G+ KE + ER ++ K E + N
Sbjct: 448 GGQQKETVEERMERIKLRIAKRKEVAQAN 476
>AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical
protein Y54F10BM.2 protein.
Length = 1173
Score = 28.7 bits (61), Expect = 3.9
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 11/89 (12%)
Frame = +2
Query: 305 EEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGR-----------KESTAPDRSYR 451
E+ AS Q+ E P +P ++ +D DE D +ES++ D R
Sbjct: 393 EDEASAQK-----EKPKKPATKASDADEDDDEESSDEESDEESEDSEESEESSSDDDEDR 447
Query: 452 SGEGKEQIPERHRELRSH*LKHTETCEKN 538
G+ KE + ER ++ K E + N
Sbjct: 448 GGQQKETVEERMERIKLRIAKRKEVAQAN 476
>AC006790-7|AAF60731.1| 547|Caenorhabditis elegans Suppressor of
mec and unc defectsprotein 2 protein.
Length = 547
Score = 28.7 bits (61), Expect = 3.9
Identities = 23/73 (31%), Positives = 31/73 (42%)
Frame = +2
Query: 272 FEPAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYR 451
+ P+ RDS + G RR RS + RSR +D D + D E +A R
Sbjct: 329 YVPSRKSRDSRDAGRRGSRRDRSRD-------RSRDRDRDRDRDNRDRYFEKSANSRREE 381
Query: 452 SGEGKEQIPERHR 490
+EQ ER R
Sbjct: 382 EQNRREQQRERER 394
>Z48009-5|CAA88086.1| 329|Caenorhabditis elegans Hypothetical
protein AH6.7 protein.
Length = 329
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 234 LLSGNVFSRRKHNLFIGVDVTETAGVEAFEL 142
LL N+FS H +F+G+ + E + F+L
Sbjct: 58 LLYQNLFSANIHQIFLGITIVERLNIAFFKL 88
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 27.9 bits (59), Expect = 6.8
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +2
Query: 335 RSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDR-SYRSGEGKEQIPERHRELRSH*L 511
R +PP RSR R+ S + S +P R S R E + P+R L
Sbjct: 96 RRSRTPPRRRSRSRD-RKRSRRSRSRSSSRSRSPVRESRRRSESRSPSPKRD-------L 147
Query: 512 KHTETCEKNPLPTKD 556
K + ++PLP KD
Sbjct: 148 KREASRSRSPLPAKD 162
>U00048-14|AAB53834.1| 270|Caenorhabditis elegans Hypothetical
protein C05D11.13 protein.
Length = 270
Score = 27.9 bits (59), Expect = 6.8
Identities = 22/73 (30%), Positives = 30/73 (41%)
Frame = +2
Query: 275 EPAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRS 454
EP S EP G R CR + R R R+ S+E H + + A D Y+
Sbjct: 50 EPHITDIPSSSEPQEGSRECRLSKEAHRK--RLRRARETSEETH---TRLAKAAD--YKR 102
Query: 455 GEGKEQIPERHRE 493
E+ E +RE
Sbjct: 103 KRCSEETEEEYRE 115
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = +2
Query: 383 RQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHRELRSH*LKHTETCEKNPLPTKD 556
+ D+ + DD +KE D+ + E KE+ E +E + K E E+ K+
Sbjct: 154 KSDNKDDKDDEKKEEKKDDKEEKKEEKKEEKKEEKKEEKKEEKKEEEKKEEKKEEKKE 211
>Z81495-5|CAB04059.1| 178|Caenorhabditis elegans Hypothetical
protein F08G2.5 protein.
Length = 178
Score = 27.5 bits (58), Expect = 9.0
Identities = 20/74 (27%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Frame = +2
Query: 278 PAEAHRDSGEEPASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPD--RSYR 451
P + E PA RR R S + + T DS + DD S++ D S
Sbjct: 58 PRSSELPISESPAPRARRARKQRSKRKSVKPPNTSSDDSSDDSDDSSSSSSSDDSVSSKS 117
Query: 452 SGEGKEQIPERHRE 493
S + P R R+
Sbjct: 118 STNSSDSSPCRCRD 131
>Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical
protein C05C9.3 protein.
Length = 1225
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +3
Query: 231 EDPEVFIRGIEKFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 404
++ E I +E S H + ++KN D ++ E Q L+G F+ +MK+
Sbjct: 375 KEAEELISHLELESSQNSIHNDNRKKNEDYDMEISEIETITQRQLEGYGTFNSPEMKN 432
>Z54216-6|CAB76416.2| 319|Caenorhabditis elegans Hypothetical
protein T24H10.7a protein.
Length = 319
Score = 27.5 bits (58), Expect = 9.0
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Frame = +2
Query: 305 EEPASGQRRCRSGE----SPPEPLGRSRTLRQD--SDEAHDDGRKESTA 433
EEP S S E +P P R + ++D D DDG KESTA
Sbjct: 6 EEPPSSSTSSESPEVVLKAPKAPTRRRKNSKKDRRQDMEVDDGEKESTA 54
>AF047653-2|AAC04459.1| 388|Caenorhabditis elegans Hypothetical
protein W02F12.3 protein.
Length = 388
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +2
Query: 311 PASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTA 433
P++ + GE P EP R + +D D DD K ST+
Sbjct: 283 PSTAENNSDHGEGPSEPQNRPPSRPEDDD---DDSNKPSTS 320
>AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical
protein T08B2.5f protein.
Length = 838
Score = 27.5 bits (58), Expect = 9.0
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +2
Query: 311 PASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHR 490
P SG+ + S RSR+ +D GR S +P R S + ++ R R
Sbjct: 13 PRSGENKSSRSPSWAREARRSRSRSRD----RRGGRSRSRSPSRRRTSRDRRDDRSSRRR 68
Query: 491 ELRSH 505
RSH
Sbjct: 69 RDRSH 73
>AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical
protein T08B2.5c protein.
Length = 866
Score = 27.5 bits (58), Expect = 9.0
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +2
Query: 311 PASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHR 490
P SG+ + S RSR+ +D GR S +P R S + ++ R R
Sbjct: 41 PRSGENKSSRSPSWAREARRSRSRSRD----RRGGRSRSRSPSRRRTSRDRRDDRSSRRR 96
Query: 491 ELRSH 505
RSH
Sbjct: 97 RDRSH 101
>AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical
protein T08B2.5a protein.
Length = 924
Score = 27.5 bits (58), Expect = 9.0
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +2
Query: 311 PASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHR 490
P SG+ + S RSR+ +D GR S +P R S + ++ R R
Sbjct: 99 PRSGENKSSRSPSWAREARRSRSRSRD----RRGGRSRSRSPSRRRTSRDRRDDRSSRRR 154
Query: 491 ELRSH 505
RSH
Sbjct: 155 RDRSH 159
>AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical
protein T08B2.5b protein.
Length = 925
Score = 27.5 bits (58), Expect = 9.0
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +2
Query: 311 PASGQRRCRSGESPPEPLGRSRTLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHR 490
P SG+ + S RSR+ +D GR S +P R S + ++ R R
Sbjct: 100 PRSGENKSSRSPSWAREARRSRSRSRD----RRGGRSRSRSPSRRRTSRDRRDDRSSRRR 155
Query: 491 ELRSH 505
RSH
Sbjct: 156 RDRSH 160
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,955,453
Number of Sequences: 27780
Number of extensions: 280697
Number of successful extensions: 1093
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1090
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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