Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0029
         (601 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   1.7  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   1.7  
AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced prot...    23   3.0  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   7.0  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   7.0  
AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.            21   9.2  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   9.2  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 74  LRTGCRHPSRGGGLPSAKQ 130
           L + C  PSRG  +PS+++
Sbjct: 12  LLSSCTRPSRGNAVPSSQR 30


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 74  LRTGCRHPSRGGGLPSAKQ 130
           L + C  PSRG  +PS+++
Sbjct: 12  LLSSCTRPSRGNAVPSSQR 30


>AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 36

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 500 MCFPYNLCRIPRDLSPTQITL 438
           M  PY++ ++P  LSP   T+
Sbjct: 1   MSSPYHVAQLPHHLSPNMPTM 21


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +1

Query: 367 VRSVHTGVSKVIRNRLGEPG 426
           ++++H G + +IRN    PG
Sbjct: 566 IQNLHAGENTIIRNSQQAPG 585


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +3

Query: 204 MKMVSAAKYTRAERDLKLLVPMVKVQYSSMKGLRLHLLKM 323
           M   SA  ++ +   L LL+P + + +   +  R HLL++
Sbjct: 1   MAAASATGFSASSVFLSLLIPALILYFIYFRISRRHLLEL 40


>AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.
          Length = 122

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -1

Query: 463 IYLPHRSP*CSQHQVRRDG 407
           I +PHR+P  + +   +DG
Sbjct: 3   ILIPHRNPASANYYENKDG 21


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 394 KVIRNRLGEPGAENIKVICVGDKSRG 471
           + + N LGE G E +  +  GD+  G
Sbjct: 624 RYVDNLLGELGGERLLKLAQGDEMCG 649


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,741
Number of Sequences: 438
Number of extensions: 4212
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)