Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0028
         (605 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    23   2.3  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    23   2.3  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               22   4.1  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   7.1  

>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 358 ICFLKCILIQKLCM*NSLI 302
           +C++KCI+I    M N +I
Sbjct: 69  MCYMKCIMIATKAMKNDVI 87


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 358 ICFLKCILIQKLCM*NSLI 302
           +C++KCI+I    M N +I
Sbjct: 43  MCYMKCIMIATKAMKNDVI 61


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +1

Query: 427 DDCTNDSEFINCFVIVHTNHYENFSFAQFQNFFRHR 534
           D C N   FI CF  + ++ YE+     F++  +H+
Sbjct: 126 DKCENGLNFIICFSKLLSDMYED----TFEDTLKHK 157


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -3

Query: 117 NYACVYFFTYYNVYIKNKQ*NFGYSQILC 31
           NY  VY    ++V+  N     G+S  LC
Sbjct: 269 NYGGVYHLDNHHVHHANHHAILGHSGFLC 297


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,432
Number of Sequences: 438
Number of extensions: 3221
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)