Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0027
(801 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 291 3e-79
SB_56| Best HMM Match : Actin (HMM E-Value=0) 291 4e-79
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 291 4e-79
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 290 8e-79
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 219 2e-57
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 170 1e-42
SB_54| Best HMM Match : Actin (HMM E-Value=0) 150 1e-36
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 149 3e-36
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 141 7e-34
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 126 3e-29
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 79 3e-15
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 62 7e-10
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 61 9e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 3e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 55 6e-08
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 36 0.029
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.62
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.62
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.82
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.82
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_45934| Best HMM Match : Gp-FAR-1 (HMM E-Value=2) 30 2.5
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 30 2.5
SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_10665| Best HMM Match : PT (HMM E-Value=6.2) 28 7.7
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 291 bits (715), Expect = 3e-79
Identities = 141/180 (78%), Positives = 148/180 (82%), Gaps = 1/180 (0%)
Frame = +3
Query: 255 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 434
GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL
Sbjct: 46 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 105
Query: 435 TEAPLQPQGQQREDDPDHVRNIQHAAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 614
TEAPL P+ + + AMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPI
Sbjct: 106 TEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPI 165
Query: 615 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFIPPPSGKSF-VTSRRTVYVAXDFEQ 791
YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF + + YVA DFEQ
Sbjct: 166 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQ 225
Score = 110 bits (265), Expect = 1e-24
Identities = 62/127 (48%), Positives = 70/127 (55%)
Frame = +1
Query: 124 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVWDRRTLM*EMRHRAK 303
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV ++ ++K
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 304 XXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSCSLRLPFNPKANREKMTQ 483
+ P P NPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 484 IMFETFN 504
IMFETFN
Sbjct: 122 IMFETFN 128
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 291 bits (714), Expect = 4e-79
Identities = 141/180 (78%), Positives = 148/180 (82%), Gaps = 1/180 (0%)
Frame = +3
Query: 255 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 434
GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL
Sbjct: 46 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 105
Query: 435 TEAPLQPQGQQREDDPDHVRNIQHAAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 614
TEAPL P+ + + AMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPI
Sbjct: 106 TEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPI 165
Query: 615 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFIPPPSGKSF-VTSRRTVYVAXDFEQ 791
YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF + + YVA DFEQ
Sbjct: 166 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 225
Score = 111 bits (268), Expect = 5e-25
Identities = 63/127 (49%), Positives = 70/127 (55%)
Frame = +1
Query: 124 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVWDRRTLM*EMRHRAK 303
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV ++ ++K
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 304 XXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSCSLRLPFNPKANREKMTQ 483
+ P P NPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 484 IMFETFN 504
IMFETFN
Sbjct: 122 IMFETFN 128
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 291 bits (714), Expect = 4e-79
Identities = 141/180 (78%), Positives = 148/180 (82%), Gaps = 1/180 (0%)
Frame = +3
Query: 255 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 434
GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL
Sbjct: 47 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 106
Query: 435 TEAPLQPQGQQREDDPDHVRNIQHAAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 614
TEAPL P+ + + AMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPI
Sbjct: 107 TEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPI 166
Query: 615 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFIPPPSGKSF-VTSRRTVYVAXDFEQ 791
YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF + + YVA DFEQ
Sbjct: 167 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 226
Score = 118 bits (283), Expect = 7e-27
Identities = 65/129 (50%), Positives = 72/129 (55%)
Frame = +1
Query: 118 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVWDRRTLM*EMRHR 297
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV ++ +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 298 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSCSLRLPFNPKANREKM 477
+K + P P NPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 478 TQIMFETFN 504
TQIMFETFN
Sbjct: 121 TQIMFETFN 129
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 290 bits (712), Expect = 8e-79
Identities = 140/180 (77%), Positives = 148/180 (82%), Gaps = 1/180 (0%)
Frame = +3
Query: 255 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 434
GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL
Sbjct: 47 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 106
Query: 435 TEAPLQPQGQQREDDPDHVRNIQHAAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 614
TEAPL P+ + + AMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPI
Sbjct: 107 TEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPI 166
Query: 615 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFIPPPSGKSF-VTSRRTVYVAXDFEQ 791
YEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSF + + YVA DFEQ
Sbjct: 167 YEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 226
Score = 113 bits (272), Expect = 2e-25
Identities = 64/129 (49%), Positives = 71/129 (55%)
Frame = +1
Query: 118 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVWDRRTLM*EMRHR 297
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV ++ +
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 298 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSCSLRLPFNPKANREKM 477
+K + P P NPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 478 TQIMFETFN 504
TQIMFETFN
Sbjct: 121 TQIMFETFN 129
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 219 bits (535), Expect = 2e-57
Identities = 104/127 (81%), Positives = 109/127 (85%), Gaps = 2/127 (1%)
Frame = +3
Query: 255 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 434
GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL
Sbjct: 47 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 106
Query: 435 TEAPLQPQGQQREDDPDHVRNIQHAAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 614
TEAPL P+ + + AMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPI
Sbjct: 107 TEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPI 166
Query: 615 YE--GYA 629
YE GY+
Sbjct: 167 YEERGYS 173
Score = 113 bits (272), Expect = 2e-25
Identities = 62/129 (48%), Positives = 71/129 (55%)
Frame = +1
Query: 118 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVWDRRTLM*EMRHR 297
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV ++ +
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 298 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSCSLRLPFNPKANREKM 477
+K + P P NPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 478 TQIMFETFN 504
TQIMFETFN
Sbjct: 121 TQIMFETFN 129
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +2
Query: 722 TTAEREIVRDIKE 760
TTAEREIVRDIKE
Sbjct: 176 TTAEREIVRDIKE 188
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 170 bits (413), Expect = 1e-42
Identities = 83/186 (44%), Positives = 118/186 (63%), Gaps = 2/186 (1%)
Frame = +3
Query: 240 SGRDGGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPE 416
S + G + KD VGDEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P
Sbjct: 44 SQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPR 103
Query: 417 EHPVLLTEAPLQPQGQQREDDPDHVRNIQHAAMYVAIQAVLSLYASGRTTGIVLDSGDGV 596
VLLTE PL P + + N Q +Y+AIQAVL+LYA G TG+V+DSGDGV
Sbjct: 104 NTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGV 163
Query: 597 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFIPPPSGKSF-VTSRRTVYV 773
+H P+YEG+ALPH RLD+AGRD+T YL+K++ RGY+F ++ + + YV
Sbjct: 164 THICPVYEGFALPHLTRRLDIAGRDITKYLIKLMLLRGYAFNHTADFETVRMMKEKLCYV 223
Query: 774 AXDFEQ 791
+ EQ
Sbjct: 224 GYNIEQ 229
Score = 56.4 bits (130), Expect = 3e-08
Identities = 41/129 (31%), Positives = 61/129 (47%), Gaps = 7/129 (5%)
Frame = +1
Query: 136 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVWD--RRTLM-----*EMRH 294
+ +V DNG+G K G+AG + P +FPS+VGRP + V D + LM ++R+
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 295 RAKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSCSLRLPFNPKANREK 474
+ + + FG S M+ PRNT+ P NP NREK
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFG--ESKMNI--DPRNTKVLLTEPPLNPMKNREK 122
Query: 475 MTQIMFETF 501
M ++MFE +
Sbjct: 123 MIEVMFENY 131
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 150 bits (363), Expect = 1e-36
Identities = 75/142 (52%), Positives = 96/142 (67%), Gaps = 1/142 (0%)
Frame = +3
Query: 369 KIWHHTFYNELRVAPEEHPVLLTEAPLQPQGQQREDDPDHVRNIQHAAMYVAIQAVLSLY 548
K+W H F ++LRV E+ PVLLTEAPL P+ + + MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 549 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFIPP 728
ASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQST 2248
Query: 729 PSGKSFVTSRRTV-YVAXDFEQ 791
+ + T+ Y A D+E+
Sbjct: 2249 AEQQIIRDLKETLCYCAMDYER 2270
Score = 59.7 bits (138), Expect = 3e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 142 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 243
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 149 bits (361), Expect = 3e-36
Identities = 79/131 (60%), Positives = 91/131 (69%), Gaps = 3/131 (2%)
Frame = +3
Query: 408 APEEHPVLLTEAPLQPQGQQREDDPDHV--RNIQHAAMYVAIQAVLSLYASGRTTGIVLD 581
A + +L + P++ DD + + AMYVAIQAVLSLYASGRTTGIV+D
Sbjct: 58 AQSKRGILTLKYPIEHGIVTNWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMD 117
Query: 582 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFIPPPSGKSF-VTSR 758
SGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSF +
Sbjct: 118 SGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 177
Query: 759 RTVYVAXDFEQ 791
+ YVA DFEQ
Sbjct: 178 KLCYVALDFEQ 188
Score = 93.9 bits (223), Expect = 1e-19
Identities = 42/45 (93%), Positives = 42/45 (93%)
Frame = +3
Query: 255 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 389
GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 46 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 93.5 bits (222), Expect = 2e-19
Identities = 41/44 (93%), Positives = 44/44 (100%)
Frame = +1
Query: 124 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 255
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 45
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 141 bits (341), Expect = 7e-34
Identities = 70/95 (73%), Positives = 76/95 (80%), Gaps = 1/95 (1%)
Frame = +3
Query: 510 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 689
A+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLAGRDLTDYLM
Sbjct: 10 AVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLM 69
Query: 690 KILTERGYSFIPPPSGKSF-VTSRRTVYVAXDFEQ 791
K++TERGYSF + + YVA DF Q
Sbjct: 70 KLMTERGYSFTTTAEREIVRDIKEKLCYVALDFYQ 104
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 126 bits (303), Expect = 3e-29
Identities = 55/101 (54%), Positives = 78/101 (77%)
Frame = +3
Query: 417 EHPVLLTEAPLQPQGQQREDDPDHVRNIQHAAMYVAIQAVLSLYASGRTTGIVLDSGDGV 596
+HPVLLTEAPL P+ + + A+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 597 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 719
SH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCF 226
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 79.4 bits (187), Expect = 3e-15
Identities = 40/134 (29%), Positives = 72/134 (53%)
Frame = +3
Query: 327 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLQPQGQQREDDPDHVRNIQH 506
PI+ G++ +WD EKI + + ++ HP+L++EA + ++ +
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 507 AAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 686
A ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQC 122
Query: 687 MKILTERGYSFIPP 728
++ E IPP
Sbjct: 123 RQMFEETNVEVIPP 136
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 61.7 bits (143), Expect = 7e-10
Identities = 38/96 (39%), Positives = 55/96 (57%), Gaps = 9/96 (9%)
Frame = +3
Query: 522 AIQAVLSLYASG-------RT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 677
A +AVL+L AS RT TG V+DSGDGV+H +P+ EGY + I + +AGRD+T
Sbjct: 40 ATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 99
Query: 678 DYLMKILTERGYSFIPPPSGKSFVT-SRRTVYVAXD 782
++ ++L ER P S ++ T R Y+ D
Sbjct: 100 FFVQQLLREREMGIPPEQSMETAKTIKERWGYICPD 135
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 61.3 bits (142), Expect = 9e-10
Identities = 41/120 (34%), Positives = 55/120 (45%)
Frame = +3
Query: 255 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 434
G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Query: 435 TEAPLQPQGQQREDDPDHVRNIQHAAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 614
L AA + + Q TG V+DSGDGV+H +P+
Sbjct: 337 AVLAL-------------------AASWTSRQV-----GERTLTGCVIDSGDGVTHVIPV 372
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 3e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 127 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 243
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 55.2 bits (127), Expect = 6e-08
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +3
Query: 528 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-TE 704
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 705 RGYSF 719
RG++F
Sbjct: 827 RGHNF 831
Score = 48.8 bits (111), Expect = 5e-06
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = +1
Query: 112 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 255
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLI 740
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -1
Query: 240 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 124
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 36.3 bits (80), Expect = 0.029
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 3/128 (2%)
Frame = +3
Query: 276 YVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAP 446
++GD+ + + L Y P + G + NWD ++IW +TF E L A +E +L E
Sbjct: 273 FIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKEGLEDAMDE--ILFEEYN 330
Query: 447 LQPQGQQREDDPDHVRNIQHAAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 626
+ + AA A + + S +V+D+G +H VP++ G
Sbjct: 331 FKALSRTT------------AAQLSAYKCHQDM-VSKNPVCLVVDTGYSFTHIVPVFNGK 377
Query: 627 ALPHAILR 650
+ A+ R
Sbjct: 378 VIKKAVRR 385
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.9 bits (69), Expect = 0.62
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Frame = +3
Query: 240 SGRDGGM-GQKDS---YVGDEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELR 404
SG+ GG G+ DS VG++ S I L+ P + +VT+++ E++ H F +
Sbjct: 100 SGKIGGRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGI 159
Query: 405 VAP--EEHPVLLTEAPLQP 455
P HPV++TE P
Sbjct: 160 NTPGGVNHPVIMTEPVCNP 178
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 31.9 bits (69), Expect = 0.62
Identities = 27/68 (39%), Positives = 30/68 (44%)
Frame = +2
Query: 518 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDP 697
RR S A R RS R R+ RRR RR R+P H S SRSR R P
Sbjct: 211 RRSHSPAHHRRSRSRSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSR-SRSPRRRH 269
Query: 698 HRARLLVH 721
R+R H
Sbjct: 270 SRSRSPTH 277
Score = 28.3 bits (60), Expect = 7.7
Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 5/86 (5%)
Frame = +2
Query: 497 HSTRRHVRRHPSRALAVRVRSYHRYRAGLRRR-----CLPHRAHLRRIRTPPRHPASGLS 661
HS H RR SR+ + R R R+ RRR HR+H R R+ S
Sbjct: 214 HSPAHH-RRSRSRSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSRSRSPRRRHSRS 272
Query: 662 RSRPHRLPHEDPHRARLLVHTTAERE 739
RS HR H H E++
Sbjct: 273 RSPTHRRHRSRSHSPEKKKHKKKEKK 298
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.82
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 215 GNTARGASSPAKPALHIPEPLSTT 144
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.82
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 215 GNTARGASSPAKPALHIPEPLSTT 144
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = -3
Query: 664 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 527
P+ + +W P T W +PSP+ T P ++T+W
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSW 138
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -3
Query: 664 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 527
P + S +P T W +PSP+ T P ++T+W
Sbjct: 57 PLSQYKTTFMSSTFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTTSW 102
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -3
Query: 664 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 527
P+ + +W S P T W P P+ T P ++T+W
Sbjct: 81 PSPQYKTTSWTSPSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSW 126
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 215 GNTARGASSPAKPALHIPEPLSTT 144
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_45934| Best HMM Match : Gp-FAR-1 (HMM E-Value=2)
Length = 694
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/45 (42%), Positives = 22/45 (48%)
Frame = -3
Query: 598 ETPSPESSTIPVVRPDAYSESTAWMATYMAAC*MFRT*SGSSSLC 464
ETP+P + P PDA TAW+ T A FRT S S C
Sbjct: 169 ETPTPALESAPAAMPDA--TDTAWV-TAKARLYFFRTCRPSPSRC 210
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = +3
Query: 372 IWHHTFYNELRVAPEEHPVLLTEAPLQPQGQQREDDPDHVRN-IQHAAMYVAIQAVLSLY 548
I H F + L+V P +H V++T P Q++E+ + + + A+Y+ Q++L++Y
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMT-IPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMY 570
Query: 549 ASGRTTGIV 575
+ +GIV
Sbjct: 571 SYSAVSGIV 579
>SB_15720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1277
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +2
Query: 497 HSTRRHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRR-IRTPPRHPASGLSRSRP 673
++TR H RR + ++ RS + R+ RR R H RR T RH + +R
Sbjct: 715 NTTRSHTRRSSNTTRSLTRRSSNTTRSHTRRSSNTTRRHTRRSSNTTRRHTRRSSNTTRS 774
Query: 674 H 676
H
Sbjct: 775 H 775
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 215 GNTARGASSPAKPALHIPEPLSTT 144
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 215 GNTARGASSPAKPALHIPEPLSTT 144
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_10665| Best HMM Match : PT (HMM E-Value=6.2)
Length = 215
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 599 PHRAHLRRIRTPPR-HPASGLSRSRPHRLPHEDPH 700
PHR H+ RTP R H + PH P +PH
Sbjct: 161 PHRPHMDPTRTPHRPHMDPTRTSHGPHTDPTRNPH 195
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,692,862
Number of Sequences: 59808
Number of extensions: 660541
Number of successful extensions: 2418
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2370
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2215746665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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