Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0027
(801 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 291 3e-79
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 291 3e-79
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 291 4e-79
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 291 4e-79
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 291 4e-79
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 291 4e-79
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 291 4e-79
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 291 4e-79
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 291 4e-79
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 291 4e-79
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 281 4e-76
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 187 9e-48
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 166 1e-41
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 123 2e-28
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 100 1e-21
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 100 1e-21
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 100 2e-21
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 100 2e-21
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 91 8e-19
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 43 2e-04
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 29 2.9
U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z68317-3|CAA92687.1| 599|Caenorhabditis elegans Hypothetical pr... 29 5.1
AC006801-1|AAF60752.2| 501|Caenorhabditis elegans Hypothetical ... 29 5.1
Z70311-4|CAA94373.1| 541|Caenorhabditis elegans Hypothetical pr... 28 6.8
U88173-11|AAK21390.1| 329|Caenorhabditis elegans Hypothetical p... 28 6.8
AL034365-3|CAA22261.1| 563|Caenorhabditis elegans Hypothetical ... 28 6.8
Z70718-5|CAA94670.1| 197|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical pr... 28 8.9
AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm (myotubu... 28 8.9
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 8.9
AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical... 28 8.9
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 28 8.9
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 291 bits (715), Expect = 3e-79
Identities = 142/180 (78%), Positives = 148/180 (82%), Gaps = 1/180 (0%)
Frame = +3
Query: 255 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 434
GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL
Sbjct: 47 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 106
Query: 435 TEAPLQPQGQQREDDPDHVRNIQHAAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 614
TEAPL P+ + + AMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPI
Sbjct: 107 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPI 166
Query: 615 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFIPPPSGKSF-VTSRRTVYVAXDFEQ 791
YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF + + YVA DFEQ
Sbjct: 167 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 226
Score = 118 bits (283), Expect = 6e-27
Identities = 65/129 (50%), Positives = 72/129 (55%)
Frame = +1
Query: 118 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVWDRRTLM*EMRHR 297
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV ++ +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 298 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSCSLRLPFNPKANREKM 477
+K + P P NPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 478 TQIMFETFN 504
TQIMFETFN
Sbjct: 121 TQIMFETFN 129
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 291 bits (715), Expect = 3e-79
Identities = 142/180 (78%), Positives = 148/180 (82%), Gaps = 1/180 (0%)
Frame = +3
Query: 255 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 434
GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL
Sbjct: 47 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 106
Query: 435 TEAPLQPQGQQREDDPDHVRNIQHAAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 614
TEAPL P+ + + AMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPI
Sbjct: 107 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPI 166
Query: 615 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFIPPPSGKSF-VTSRRTVYVAXDFEQ 791
YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF + + YVA DFEQ
Sbjct: 167 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 226
Score = 116 bits (279), Expect = 2e-26
Identities = 63/129 (48%), Positives = 72/129 (55%)
Frame = +1
Query: 118 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVWDRRTLM*EMRHR 297
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV ++ +
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 298 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSCSLRLPFNPKANREKM 477
+K + P P NPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 478 TQIMFETFN 504
TQIMFETFN
Sbjct: 121 TQIMFETFN 129
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 291 bits (714), Expect = 4e-79
Identities = 141/180 (78%), Positives = 148/180 (82%), Gaps = 1/180 (0%)
Frame = +3
Query: 255 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 434
GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL
Sbjct: 47 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 106
Query: 435 TEAPLQPQGQQREDDPDHVRNIQHAAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 614
TEAPL P+ + + AMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPI
Sbjct: 107 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPI 166
Query: 615 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFIPPPSGKSF-VTSRRTVYVAXDFEQ 791
YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF + + YVA DFEQ
Sbjct: 167 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 226
Score = 119 bits (286), Expect = 3e-27
Identities = 66/129 (51%), Positives = 72/129 (55%)
Frame = +1
Query: 118 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVWDRRTLM*EMRHR 297
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV ++ +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 298 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSCSLRLPFNPKANREKM 477
+K + P P NPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 478 TQIMFETFN 504
TQIMFETFN
Sbjct: 121 TQIMFETFN 129
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 291 bits (714), Expect = 4e-79
Identities = 141/180 (78%), Positives = 148/180 (82%), Gaps = 1/180 (0%)
Frame = +3
Query: 255 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 434
GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL
Sbjct: 47 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 106
Query: 435 TEAPLQPQGQQREDDPDHVRNIQHAAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 614
TEAPL P+ + + AMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPI
Sbjct: 107 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPI 166
Query: 615 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFIPPPSGKSF-VTSRRTVYVAXDFEQ 791
YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF + + YVA DFEQ
Sbjct: 167 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 226
Score = 119 bits (286), Expect = 3e-27
Identities = 66/129 (51%), Positives = 72/129 (55%)
Frame = +1
Query: 118 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVWDRRTLM*EMRHR 297
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV ++ +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 298 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSCSLRLPFNPKANREKM 477
+K + P P NPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 478 TQIMFETFN 504
TQIMFETFN
Sbjct: 121 TQIMFETFN 129
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 291 bits (714), Expect = 4e-79
Identities = 141/180 (78%), Positives = 148/180 (82%), Gaps = 1/180 (0%)
Frame = +3
Query: 255 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 434
GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL
Sbjct: 47 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 106
Query: 435 TEAPLQPQGQQREDDPDHVRNIQHAAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 614
TEAPL P+ + + AMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPI
Sbjct: 107 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPI 166
Query: 615 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFIPPPSGKSF-VTSRRTVYVAXDFEQ 791
YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF + + YVA DFEQ
Sbjct: 167 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 226
Score = 119 bits (286), Expect = 3e-27
Identities = 66/129 (51%), Positives = 72/129 (55%)
Frame = +1
Query: 118 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVWDRRTLM*EMRHR 297
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV ++ +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 298 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSCSLRLPFNPKANREKM 477
+K + P P NPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 478 TQIMFETFN 504
TQIMFETFN
Sbjct: 121 TQIMFETFN 129
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 291 bits (714), Expect = 4e-79
Identities = 141/180 (78%), Positives = 148/180 (82%), Gaps = 1/180 (0%)
Frame = +3
Query: 255 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 434
GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL
Sbjct: 47 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 106
Query: 435 TEAPLQPQGQQREDDPDHVRNIQHAAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 614
TEAPL P+ + + AMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPI
Sbjct: 107 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPI 166
Query: 615 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFIPPPSGKSF-VTSRRTVYVAXDFEQ 791
YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF + + YVA DFEQ
Sbjct: 167 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 226
Score = 119 bits (286), Expect = 3e-27
Identities = 66/129 (51%), Positives = 72/129 (55%)
Frame = +1
Query: 118 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVWDRRTLM*EMRHR 297
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV ++ +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 298 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSCSLRLPFNPKANREKM 477
+K + P P NPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 478 TQIMFETFN 504
TQIMFETFN
Sbjct: 121 TQIMFETFN 129
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 291 bits (714), Expect = 4e-79
Identities = 141/180 (78%), Positives = 148/180 (82%), Gaps = 1/180 (0%)
Frame = +3
Query: 255 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 434
GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL
Sbjct: 47 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 106
Query: 435 TEAPLQPQGQQREDDPDHVRNIQHAAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 614
TEAPL P+ + + AMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPI
Sbjct: 107 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPI 166
Query: 615 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFIPPPSGKSF-VTSRRTVYVAXDFEQ 791
YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF + + YVA DFEQ
Sbjct: 167 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 226
Score = 119 bits (286), Expect = 3e-27
Identities = 66/129 (51%), Positives = 72/129 (55%)
Frame = +1
Query: 118 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVWDRRTLM*EMRHR 297
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV ++ +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 298 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSCSLRLPFNPKANREKM 477
+K + P P NPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 478 TQIMFETFN 504
TQIMFETFN
Sbjct: 121 TQIMFETFN 129
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 291 bits (714), Expect = 4e-79
Identities = 141/180 (78%), Positives = 148/180 (82%), Gaps = 1/180 (0%)
Frame = +3
Query: 255 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 434
GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL
Sbjct: 3 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 62
Query: 435 TEAPLQPQGQQREDDPDHVRNIQHAAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 614
TEAPL P+ + + AMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPI
Sbjct: 63 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPI 122
Query: 615 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFIPPPSGKSF-VTSRRTVYVAXDFEQ 791
YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF + + YVA DFEQ
Sbjct: 123 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 182
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 291 bits (714), Expect = 4e-79
Identities = 141/180 (78%), Positives = 148/180 (82%), Gaps = 1/180 (0%)
Frame = +3
Query: 255 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 434
GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL
Sbjct: 33 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 92
Query: 435 TEAPLQPQGQQREDDPDHVRNIQHAAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 614
TEAPL P+ + + AMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPI
Sbjct: 93 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPI 152
Query: 615 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFIPPPSGKSF-VTSRRTVYVAXDFEQ 791
YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF + + YVA DFEQ
Sbjct: 153 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 212
Score = 80.6 bits (190), Expect = 1e-15
Identities = 48/111 (43%), Positives = 54/111 (48%)
Frame = +1
Query: 172 KAGFAGDDAPRAVFPSIVGRPRHQGVMVVWDRRTLM*EMRHRAKXXXXXXXXXXXXXXXL 351
+AGFAGDDAPRAVFPSIVGRPRHQGVMV ++ ++K
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 352 TGMTWRRFGIIPSTMSCVSPPRNTQSCSLRLPFNPKANREKMTQIMFETFN 504
+ P P NPKANREKMTQIMFETFN
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 115
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 291 bits (714), Expect = 4e-79
Identities = 141/180 (78%), Positives = 148/180 (82%), Gaps = 1/180 (0%)
Frame = +3
Query: 255 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 434
GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL
Sbjct: 47 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 106
Query: 435 TEAPLQPQGQQREDDPDHVRNIQHAAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 614
TEAPL P+ + + AMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPI
Sbjct: 107 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPI 166
Query: 615 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFIPPPSGKSF-VTSRRTVYVAXDFEQ 791
YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF + + YVA DFEQ
Sbjct: 167 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 226
Score = 119 bits (286), Expect = 3e-27
Identities = 66/129 (51%), Positives = 72/129 (55%)
Frame = +1
Query: 118 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVWDRRTLM*EMRHR 297
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV ++ +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 298 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSCSLRLPFNPKANREKM 477
+K + P P NPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 478 TQIMFETFN 504
TQIMFETFN
Sbjct: 121 TQIMFETFN 129
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 281 bits (689), Expect = 4e-76
Identities = 135/179 (75%), Positives = 145/179 (81%), Gaps = 1/179 (0%)
Frame = +3
Query: 255 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 434
GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLL
Sbjct: 46 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLL 105
Query: 435 TEAPLQPQGQQREDDPDHVRNIQHAAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPI 614
TEAPL P+ + + AMYV IQAVLSLYASGRTTGIVLD+GDGV+HTVPI
Sbjct: 106 TEAPLNPKSNREKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPI 165
Query: 615 YEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFIPPPSGKSF-VTSRRTVYVAXDFE 788
YEGYALPHAI RLDLAGRDLTDY+MKILTERGY+F + + YVA DFE
Sbjct: 166 YEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYVAHDFE 224
Score = 111 bits (267), Expect = 6e-25
Identities = 62/127 (48%), Positives = 70/127 (55%)
Frame = +1
Query: 124 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVWDRRTLM*EMRHRAK 303
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV ++ ++K
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 304 XXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSCSLRLPFNPKANREKMTQ 483
+ P P NPK+NREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 484 IMFETFN 504
IMFETFN
Sbjct: 122 IMFETFN 128
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 187 bits (455), Expect = 9e-48
Identities = 84/157 (53%), Positives = 114/157 (72%), Gaps = 1/157 (0%)
Frame = +3
Query: 252 GGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPV 428
GG+ D ++G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPV
Sbjct: 49 GGL-DGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPV 107
Query: 429 LLTEAPLQPQGQQREDDPDHVRNIQHAAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 608
LLT+APL P + A+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H V
Sbjct: 108 LLTDAPLNPLKNRERSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAV 167
Query: 609 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 719
PI +G+A+ HAI R+DLAGRD+T+YL +L GY F
Sbjct: 168 PIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEF 204
Score = 49.6 bits (113), Expect = 3e-06
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +1
Query: 142 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM 252
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVM 47
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 166 bits (404), Expect = 1e-41
Identities = 83/184 (45%), Positives = 115/184 (62%), Gaps = 2/184 (1%)
Frame = +3
Query: 246 RDGGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEH 422
R G + KD VG+E R +L + YP+++GIV NWDDM +W HTF E L + P+E
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKEC 105
Query: 423 PVLLTEAPLQPQGQQREDDPDHVRNIQHAAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 602
+LLTE PL P + + ++YVA+QAVL+LYA G TG+V+DSGDGV+H
Sbjct: 106 KLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTH 165
Query: 603 TVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFIPPPSGKSF-VTSRRTVYVAX 779
P+YEG+AL H RLD+AGRD+T YL+K+L +RGY+F ++ + Y+A
Sbjct: 166 ICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIAY 225
Query: 780 DFEQ 791
D EQ
Sbjct: 226 DVEQ 229
Score = 51.6 bits (118), Expect = 6e-07
Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 7/127 (5%)
Frame = +1
Query: 142 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVVW--DRRTLM-----*EMRHRA 300
+VVDNG+G K G+AG + P +FPS+VGRP + V + + LM ++R
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 301 KXXXXXXXXXXXXXXXLTGMTWRRFGIIPSTMSCVSPPRNTQSCSLRLPFNPKANREKMT 480
+ + FG P + P+ + P NP +NREKM
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFG--PEKLDI--DPKECKLLLTEPPLNPNSNREKMF 124
Query: 481 QIMFETF 501
Q+MFE +
Sbjct: 125 QVMFEQY 131
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 123 bits (296), Expect = 2e-28
Identities = 62/163 (38%), Positives = 93/163 (57%), Gaps = 9/163 (5%)
Frame = +3
Query: 255 GMGQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 431
G+ D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H L
Sbjct: 59 GIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFL 118
Query: 432 LTEAPLQPQGQQREDDPDHVRNIQHAAMYVAIQAVLSLYASGRT--------TGIVLDSG 587
LTE PL + + +Y+A+QAVL+L AS + TG+V+DSG
Sbjct: 119 LTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSG 178
Query: 588 DGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 716
DGV+H +P+ +GY + I + +AGRD+T ++ +L +R ++
Sbjct: 179 DGVTHCIPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHT 221
Score = 36.7 bits (81), Expect = 0.019
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 118 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 225
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 100 bits (240), Expect = 1e-21
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +1
Query: 118 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 255
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 90.2 bits (214), Expect = 1e-18
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +3
Query: 255 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 374
GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 47 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 100 bits (240), Expect = 1e-21
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +1
Query: 118 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 255
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 90.2 bits (214), Expect = 1e-18
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +3
Query: 255 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 374
GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 47 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 99.5 bits (237), Expect = 2e-21
Identities = 44/46 (95%), Positives = 46/46 (100%)
Frame = +1
Query: 118 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 255
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 90.2 bits (214), Expect = 1e-18
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +3
Query: 255 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 374
GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 47 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 99.5 bits (237), Expect = 2e-21
Identities = 44/46 (95%), Positives = 46/46 (100%)
Frame = +1
Query: 118 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 255
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV 46
Score = 84.6 bits (200), Expect = 7e-17
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = +3
Query: 255 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 365
GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 47 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 91.1 bits (216), Expect = 8e-19
Identities = 42/132 (31%), Positives = 77/132 (58%)
Frame = +3
Query: 330 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLQPQGQQREDDPDHVRNIQHA 509
++ G++ +W+ EKI H++ N L P EHPVL +E+ + ++ + Q
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 510 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 689
A Y++ VLS +A GRT G+++DSG + VP+++GYA+ HA+++ + G +T+ L
Sbjct: 154 AYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLA 213
Query: 690 KILTERGYSFIP 725
++L ++ IP
Sbjct: 214 QMLDQQKIDVIP 225
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 127 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 225
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 44.4 bits (100), Expect = 1e-04
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 4/136 (2%)
Frame = +3
Query: 396 ELRVAPEEHPVLLTEAPLQPQGQQREDDPDHVRNIQHAAMYVAIQAVLSLYASGRTTGIV 575
EL+V P ++ VLL+ P E + +I+ + + Q L LYA TTG+V
Sbjct: 266 ELKVEPWKYKVLLSIPQNIPTVLIGELLQICLEDIKFQSAGITRQPSLILYAYDVTTGVV 325
Query: 576 LDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT--ERGYSFIPPPSGKSFV 749
+D G+ V + VP+ +GY + AI + + + D L L+ +G P K +
Sbjct: 326 VDIGERV-NIVPVIDGYVVESAICSIPYGSQQMGDSLRASLSAHNKGLYAFQSPVEKLIL 384
Query: 750 --TSRRTVYVAXDFEQ 791
+T YV D+++
Sbjct: 385 RFALEQTTYVPEDYQK 400
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 43.2 bits (97), Expect = 2e-04
Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 7/148 (4%)
Frame = +3
Query: 264 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 437
+K +V E + +L Y PIE G V NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 438 E----APLQPQGQQREDDPDHVRNIQ-HAAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 602
+ P P E D+ + H + A S + +V+DSG +
Sbjct: 98 DNNYLIPALPD-VSSEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTT 156
Query: 603 TVPIYEGYALPHAILRLDLAGRDLTDYL 686
G + +++R+D+ G+ LT+ L
Sbjct: 157 VASFVNGMLIQDSVIRIDVGGKALTNKL 184
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 43.2 bits (97), Expect = 2e-04
Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 7/148 (4%)
Frame = +3
Query: 264 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 437
+K +V E + +L Y PIE G V NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 438 E----APLQPQGQQREDDPDHVRNIQ-HAAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 602
+ P P E D+ + H + A S + +V+DSG +
Sbjct: 98 DNNYLIPALPD-VSSEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTT 156
Query: 603 TVPIYEGYALPHAILRLDLAGRDLTDYL 686
G + +++R+D+ G+ LT+ L
Sbjct: 157 VASFVNGMLIQDSVIRIDVGGKALTNKL 184
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 595 TPSPESSTIPVVRPDAYSESTAWMATYMA 509
TP P SST+PVV P ++ T +Y+A
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLA 893
>Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical
protein F28C1.1 protein.
Length = 672
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/58 (31%), Positives = 22/58 (37%)
Frame = +2
Query: 578 GLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPHEDPHRARLLVHTTAEREIVRD 751
G+ RR R R+PPR + SR+R R P R R R RD
Sbjct: 394 GMNRRSWSRSRSRSRSRSPPRRRSRSRSRTRDRRRPRRSNSRRRSRSRDRQRRSRSRD 451
>Z70287-6|CAH04747.1| 443|Caenorhabditis elegans Hypothetical
protein R09E10.9 protein.
Length = 443
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = +1
Query: 553 PVVPPVSCWT--PATVSPTPCPSTKDTHSPTPSC 648
P VPP T P TVS P PS PT SC
Sbjct: 370 PTVPPSMIQTVNPPTVSALPSPSVSPAPVPTTSC 403
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = -3
Query: 379 CQIFSMSSQLVTIPC-SMGYLRVRIPL----LLCASSPT*ESFCPIPP 251
CQ+FS QLVT+ SMG +++++ + LL + S T + P PP
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPP 298
>U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical
protein F48C1.8 protein.
Length = 343
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -2
Query: 629 CVSFVDGHGVGDTVAGVQHDTGGTTGRVQREHGLDGDVHGG 507
C + GH G G H GG G HG G HGG
Sbjct: 169 CEAHGGGHHGGGGGGGSHHHGGGGGGGGHHHHGGGGHYHGG 209
>Z68317-3|CAA92687.1| 599|Caenorhabditis elegans Hypothetical
protein T01H3.3 protein.
Length = 599
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 553 PVVPPVSCWTPATVSPTPCPSTKDTHSPTP 642
P++PP PA V T P+T++T P P
Sbjct: 97 PILPPTE--KPAPVITTETPTTRETEKPVP 124
>AC006801-1|AAF60752.2| 501|Caenorhabditis elegans Hypothetical
protein Y52D5A.2 protein.
Length = 501
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 659 SRSRPHRLPHEDPHRARLLVHTTAEREIVRDIKENCVRR 775
S S PHR+ + DP LV ++ + IK N V+R
Sbjct: 349 SESFPHRIVNGDPKELMSLVDACCDKNVKDRIKFNTVKR 387
>Z70311-4|CAA94373.1| 541|Caenorhabditis elegans Hypothetical
protein T25B9.5 protein.
Length = 541
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +2
Query: 656 LSRSRPHRLPHEDPHRARLLVHTTAEREIVRDIKENCVRR 775
L+ RPH++ + DP +L+ ER + N V+R
Sbjct: 390 LTEERPHKMENGDPKELMVLIDACCERNPNERLNFNTVKR 429
>U88173-11|AAK21390.1| 329|Caenorhabditis elegans Hypothetical
protein F46F11.8 protein.
Length = 329
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/72 (23%), Positives = 25/72 (34%)
Frame = +1
Query: 403 VSPPRNTQSCSLRLPFNPKANREKMTQIMFETFNXXXXXXXXXXXXXXXRPVVPPVSCWT 582
+ RN CS+++ + T FE F R + P + T
Sbjct: 88 IQDERNYSKCSVQVKIPETPPQNYATTEQFEQFTKKTIEQFSILAKTMERAISVPTTPST 147
Query: 583 PATVSPTPCPST 618
PA +P PST
Sbjct: 148 PARAAPASVPST 159
>AL034365-3|CAA22261.1| 563|Caenorhabditis elegans Hypothetical
protein Y69E1A.3 protein.
Length = 563
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +2
Query: 656 LSRSRPHRLPHEDPHRARLLVHTTAEREIVRDIKENCVRR 775
L+ RPH++ + DP +L+ ER + N V+R
Sbjct: 412 LTEERPHKMKNGDPKELMVLIDACCERNPNERLNFNTVKR 451
>Z70718-5|CAA94670.1| 197|Caenorhabditis elegans Hypothetical
protein C04G2.8 protein.
Length = 197
Score = 27.9 bits (59), Expect = 8.9
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Frame = +2
Query: 500 STRRHVRRHPSRALAVRVRSYHRYRAGLR-------RRCLPHRAHLRRIRTPPRHPASGL 658
S++R R SR+ + R RSY R R+G R RR +A RR T + PA
Sbjct: 122 SSKRSRSRSRSRSRS-RSRSYSRSRSGSRRSSRRRSRRRSSLKARGRRASTAKKTPAKRR 180
Query: 659 SRSR 670
SRSR
Sbjct: 181 SRSR 184
>Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical
protein M88.5b protein.
Length = 704
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/63 (20%), Positives = 26/63 (41%)
Frame = +2
Query: 497 HSTRRHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPH 676
H + H ++HP + YH ++ + + H+ + + +H S S PH
Sbjct: 112 HQMQIHHQQHPQMMQQHAQQGYHPHQQNQQHQAGQHQQSHHQSQNHNQHRNHNQSHSGPH 171
Query: 677 RLP 685
+P
Sbjct: 172 HIP 174
>Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical
protein M88.5a protein.
Length = 828
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/63 (20%), Positives = 26/63 (41%)
Frame = +2
Query: 497 HSTRRHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPH 676
H + H ++HP + YH ++ + + H+ + + +H S S PH
Sbjct: 236 HQMQIHHQQHPQMMQQHAQQGYHPHQQNQQHQAGQHQQSHHQSQNHNQHRNHNQSHSGPH 295
Query: 677 RLP 685
+P
Sbjct: 296 HIP 298
>AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm
(myotubularin) family protein 5 protein.
Length = 1744
Score = 27.9 bits (59), Expect = 8.9
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = +2
Query: 629 TPPRHPASGLSRSRPHR----LPHEDPHRARLLVHTTAEREIVRDIKENCVRRS*LRA 790
T ++ A+G +R HR + E H ++ + + AE +VR +KE+ +RRS RA
Sbjct: 1173 TLTQNNANGFPTTRIHRKALYVLLEKGHGVKIPIDSNAEAIMVRSVKESELRRSLQRA 1230
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 172 KAGFAGDDAPRAVFPSIVGRPRHQG 246
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AC024805-15|AAK39331.2| 344|Caenorhabditis elegans Hypothetical
protein Y51H7C.13 protein.
Length = 344
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 553 PVVPPVSCWTPATVSPTPCPSTKDTHSP 636
P +PP + T T + PCP T++P
Sbjct: 134 PCIPPTTTTTTTTTTRPPCPYPPATNTP 161
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 562 PPVSCWTPATVSPTPCPSTKDTHSPTPS 645
PP S TP + T P T T SP+ S
Sbjct: 226 PPSSSTTPVQTTTTTAPETTSTESPSSS 253
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 562 PPVSCWTPATVSPTPCPSTKDTHSPTPS 645
PP S TP + T P T T SP+ S
Sbjct: 502 PPSSSTTPVQTTTTTAPETTSTESPSSS 529
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,655,957
Number of Sequences: 27780
Number of extensions: 449249
Number of successful extensions: 1948
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1907
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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