Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0026
(719 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021474-4|CAD54164.1| 445|Caenorhabditis elegans Hypothetical ... 64 7e-11
AF078792-2|AAC26946.1| 512|Caenorhabditis elegans Hypothetical ... 62 5e-10
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 59 4e-09
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 58 8e-09
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 58 8e-09
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 58 8e-09
Z49127-6|CAA88947.1| 454|Caenorhabditis elegans Hypothetical pr... 53 2e-07
U23521-6|AAC46812.1| 469|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U20864-3|AAC46662.1| 574|Caenorhabditis elegans Hypothetical pr... 42 6e-04
U28730-5|AAA68259.1| 470|Caenorhabditis elegans Hypothetical pr... 37 0.017
Z54342-1|CAA91143.1| 505|Caenorhabditis elegans Hypothetical pr... 32 0.36
AC024831-8|AAK72079.3| 362|Caenorhabditis elegans Serpentine re... 30 1.4
AF125972-1|AAD14770.2| 349|Caenorhabditis elegans Hypothetical ... 29 2.5
U23515-7|AAK93859.3| 868|Caenorhabditis elegans Larp (rna bindi... 29 3.3
U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna bindi... 29 3.3
Z36753-11|CAE17918.1| 68|Caenorhabditis elegans Hypothetical p... 29 4.4
AC024831-6|AAY86308.1| 351|Caenorhabditis elegans Hypothetical ... 29 4.4
AF067950-6|AAG24156.2| 372|Caenorhabditis elegans Serpentine re... 28 5.8
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 28 5.8
Z99102-2|CAB11775.1| 499|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z75527-8|CAA99778.2| 316|Caenorhabditis elegans Hypothetical pr... 28 7.7
>AL021474-4|CAD54164.1| 445|Caenorhabditis elegans Hypothetical
protein Y32F6A.5 protein.
Length = 445
Score = 64.5 bits (150), Expect = 7e-11
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Frame = +3
Query: 405 VDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGAAPYS-GSLRKSGR*SQARTVLPKES 581
VD + N++ ++W + N P+ LWLQGGPG++ G+ ++G + + P
Sbjct: 37 VDIRTNAHTFWWLYAAKPANSQRPLFLWLQGGPGSSSSGFGNFEETGPKTLNGSDNPATW 96
Query: 582 IIGAKNYHLIFIDNPVGTGFSFTDKDEGYCTDETCIAKGLFA 707
+ A ++++DNPVG GFS+ D Y T+ T I K L A
Sbjct: 97 LQVAD---MVYVDNPVGAGFSYVDDKSAYTTEITQIGKDLLA 135
>AF078792-2|AAC26946.1| 512|Caenorhabditis elegans Hypothetical
protein Y40D12A.2 protein.
Length = 512
Score = 61.7 bits (143), Expect = 5e-10
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 3/143 (2%)
Frame = +3
Query: 294 LMLTPFLKNESIALAQELSRV-SLTETLGIESHAGFFTVDEKFNSNMYFWYFPPLSKNEA 470
L +T F + Q+++ + +LTE L + +AG+ ++ + +++WY E
Sbjct: 5 LFITLFALGSTAPADQQITSLPNLTEPLRSKHYAGYLSISDV--KQLFYWYVESEESPET 62
Query: 471 APVLLWLQGGPGAAPYSGSLRKSG--R*SQARTVLPKESIIGAKNYHLIFIDNPVGTGFS 644
APV+LWL GGPG A G + G R + + + ++I++D P G GFS
Sbjct: 63 APVVLWLNGGPGCASMEGLFIEMGPFRVRNYGEEVNRNPWTWNRIANIIYLDAPAGVGFS 122
Query: 645 FTDKDEGYCTDETCIAKGLFAAM 713
+ + + TD+ +A+ F A+
Sbjct: 123 YYNTTKKVFTDDE-VAQDNFNAL 144
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
K10C2.1 protein.
Length = 2314
Score = 58.8 bits (136), Expect = 4e-09
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Frame = +3
Query: 360 LTETLGIESHAGFFTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGAAPYSGSLRKS 539
+T + H+G+ + +++W+ S NE P++LWLQGGPG A G +
Sbjct: 1674 VTWNVNFMQHSGYLQATR--GNKLFYWFVESQSGNEGDPIILWLQGGPGCASTGGLFSEI 1731
Query: 540 GR--*SQARTVLPKESIIGAKNYHLIFIDNPVGTGFSFTDKD 659
G + L + K H++ ID+P G GFS+ DK+
Sbjct: 1732 GPFFVNPDGETLFENIYSWNKAAHILIIDSPRGVGFSYQDKN 1773
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/110 (25%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Frame = +3
Query: 333 LAQELSRVSLTETLGIESHAGFFTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGAA 512
L +L +S T T + ++G+ +D +++++W + + AP++LWL GGPG +
Sbjct: 28 LVNDLPGLSFTPTF--KQYSGY--LDGSQGNHLHYWLVESQTNPQTAPIVLWLNGGPGCS 83
Query: 513 PYSGSLRKSG--R*SQARTVLPKESIIGAKNYHLIFIDNPVGTGFSFTDK 656
G L ++G R + + + K +++F+++P GFS+ +K
Sbjct: 84 SLLGLLSENGPYRIQKDGVTVIENVNSWNKAANVLFLESPRDVGFSYREK 133
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Frame = +3
Query: 360 LTETLGIESHAGFFTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGAAPYSGSLRKS 539
+T L + ++G+ ++ + +++W+ P++LWL GGPG + L +
Sbjct: 583 ITYGLNFKQYSGY--LNGVTGNYLHYWFVESQGNPTTDPLVLWLTGGPGCSGLMAMLTEL 640
Query: 540 G--R*SQARTVLPKESIIGAKNYHLIFIDNPVGTGFSFTD 653
G + L + K ++IF+++P G GFS D
Sbjct: 641 GPFHPNPDGKTLFENVYSWNKAANVIFLESPRGVGFSVQD 680
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 2/102 (1%)
Frame = +3
Query: 360 LTETLGIESHAGFFTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGAAPYSGSLRKS 539
LT T + ++G+ + +++W P++LWL GGPG + G L +
Sbjct: 1141 LTFTPNFKQYSGYLNASA--GNYLHYWLVESQLNATYDPLILWLNGGPGCSSIGGFLEEL 1198
Query: 540 G--R*SQARTVLPKESIIGAKNYHLIFIDNPVGTGFSFTDKD 659
G + L + + K +++F++ P G+SF +
Sbjct: 1199 GPFHVNADGKTLFENTFSWNKAGNVLFLEAPRDVGYSFRSNE 1240
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 57.6 bits (133), Expect = 8e-09
Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 5/145 (3%)
Frame = +3
Query: 264 ARPNDSAGDP--LMLTPFLKNESIALAQELSRVSLTETLGIESHAGFFTVDEKFNSNMYF 437
A P A D + P N++ LS LT + +G+ T DE +++++
Sbjct: 999 AEPGTIAADEHGSQIYPTALNDAAKADMILSLPGLTFNVTYRMFSGYLTADETPLNHLFY 1058
Query: 438 WYFPPLSKNEAAPVLLWLQGGPGAAPYSGSLRKSG---R*SQARTVLPKESIIGAKNYHL 608
W+ + PV+LWL GGPG + G + G L + K ++
Sbjct: 1059 WFVESQNDPVNDPVVLWLNGGPGCSSLGGFFTELGPFHPNDDGGQTLYENVFSWNKKANV 1118
Query: 609 IFIDNPVGTGFSFTDKDEGYCTDET 683
IF++ P GFS+T+ Y D+T
Sbjct: 1119 IFLEAPAKVGFSYTEDPNYYWDDDT 1143
Score = 52.0 bits (119), Expect = 4e-07
Identities = 42/180 (23%), Positives = 84/180 (46%), Gaps = 10/180 (5%)
Frame = +3
Query: 204 YFVPAERR*ISECLSTSKLDARPNDS--AG---DPLMLTPFLKNESIALAQE---LSRVS 359
+FVP++R + + T+ L + N S AG P LT + + Q ++
Sbjct: 1496 HFVPSDRPAQALQMLTNFLSNQANYSTPAGIDVTPQPLTNVISQTNCTTGQTDRIINLPG 1555
Query: 360 LTETLGIESHAGFFTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGAAPYSGSLRKS 539
L + + ++GF +D +++W + P+LLWL GGPG++ G ++
Sbjct: 1556 LPADMLFKQYSGF--LDGLSGHKVHYWLVESENNPSTDPLLLWLNGGPGSSSLMGLFEEN 1613
Query: 540 G--R*SQARTVLPKESIIGAKNYHLIFIDNPVGTGFSFTDKDEGYCTDETCIAKGLFAAM 713
G R S+ L + K +++++++P+G G+S+ + D+ A+ +AA+
Sbjct: 1614 GPFRVSKDSQTLSRNPYSWNKFANVLYLESPIGVGYSYAYNNTNIQYDDVTTAQENYAAL 1673
Score = 44.4 bits (100), Expect = 8e-05
Identities = 26/120 (21%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Frame = +3
Query: 360 LTETLGIESHAGFFTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGAAPYSGSLRKS 539
LT + ++G+ + ++W+ + +PVLLWL GGPG++ G L ++
Sbjct: 510 LTYQINFNQYSGYLNASD--THRFHYWFVESQNDPTNSPVLLWLNGGPGSSSLWGMLTEN 567
Query: 540 G--R*SQARTVLPKESIIGAKNYHLIFIDNPVGTGFSFTDKDEGYCTDETCIAKGLFAAM 713
G R ++ L + K +++++++P G+S++ Y + A + A+
Sbjct: 568 GPFRPNKDGQTLYENVHSWNKFANVLYLESPHQVGYSYSTVANDYTYGDDLTASDNYNAL 627
Score = 41.9 bits (94), Expect = 4e-04
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Frame = +3
Query: 372 LGIESHAGFFTVDEKFN-SNMYFWYFPPLSKNEAAPVLLWLQGGPGAAPYSGSLRKSGR- 545
+ + +AG+ D N +N+++W +LLW+ GGPG + G +++ G
Sbjct: 44 VNFKQYAGYLNSDPNKNYNNLHYWLIESQLTPSNDTLLLWINGGPGCSSVFGQIQEIGPF 103
Query: 546 --*SQARTVLPKESIIGAKNYHLIFIDNPVGTGFSFTD---KDEGYCT 674
S ++TV + K +L+ ID P G GFS+ +D+ Y T
Sbjct: 104 HVSSDSQTVY-ENVFAWNKVSNLLAIDGP-GAGFSWQQNLFQDDSYVT 149
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 57.6 bits (133), Expect = 8e-09
Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 5/145 (3%)
Frame = +3
Query: 264 ARPNDSAGDP--LMLTPFLKNESIALAQELSRVSLTETLGIESHAGFFTVDEKFNSNMYF 437
A P A D + P N++ LS LT + +G+ T DE +++++
Sbjct: 999 AEPGTIAADEHGSQIYPTALNDAAKADMILSLPGLTFNVTYRMFSGYLTADETPLNHLFY 1058
Query: 438 WYFPPLSKNEAAPVLLWLQGGPGAAPYSGSLRKSG---R*SQARTVLPKESIIGAKNYHL 608
W+ + PV+LWL GGPG + G + G L + K ++
Sbjct: 1059 WFVESQNDPVNDPVVLWLNGGPGCSSLGGFFTELGPFHPNDDGGQTLYENVFSWNKKANV 1118
Query: 609 IFIDNPVGTGFSFTDKDEGYCTDET 683
IF++ P GFS+T+ Y D+T
Sbjct: 1119 IFLEAPAKVGFSYTEDPNYYWDDDT 1143
Score = 52.0 bits (119), Expect = 4e-07
Identities = 42/180 (23%), Positives = 84/180 (46%), Gaps = 10/180 (5%)
Frame = +3
Query: 204 YFVPAERR*ISECLSTSKLDARPNDS--AG---DPLMLTPFLKNESIALAQE---LSRVS 359
+FVP++R + + T+ L + N S AG P LT + + Q ++
Sbjct: 1496 HFVPSDRPAQALQMLTNFLSNQANYSTPAGIDVTPQPLTNVISQTNCTTGQTDRIINLPG 1555
Query: 360 LTETLGIESHAGFFTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGAAPYSGSLRKS 539
L + + ++GF +D +++W + P+LLWL GGPG++ G ++
Sbjct: 1556 LPADMLFKQYSGF--LDGLSGHKVHYWLVESENNPSTDPLLLWLNGGPGSSSLMGLFEEN 1613
Query: 540 G--R*SQARTVLPKESIIGAKNYHLIFIDNPVGTGFSFTDKDEGYCTDETCIAKGLFAAM 713
G R S+ L + K +++++++P+G G+S+ + D+ A+ +AA+
Sbjct: 1614 GPFRVSKDSQTLSRNPYSWNKFANVLYLESPIGVGYSYAYNNTNIQYDDVTTAQENYAAL 1673
Score = 44.4 bits (100), Expect = 8e-05
Identities = 26/120 (21%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Frame = +3
Query: 360 LTETLGIESHAGFFTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGAAPYSGSLRKS 539
LT + ++G+ + ++W+ + +PVLLWL GGPG++ G L ++
Sbjct: 510 LTYQINFNQYSGYLNASD--THRFHYWFVESQNDPTNSPVLLWLNGGPGSSSLWGMLTEN 567
Query: 540 G--R*SQARTVLPKESIIGAKNYHLIFIDNPVGTGFSFTDKDEGYCTDETCIAKGLFAAM 713
G R ++ L + K +++++++P G+S++ Y + A + A+
Sbjct: 568 GPFRPNKDGQTLYENVHSWNKFANVLYLESPHQVGYSYSTVANDYTYGDDLTASDNYNAL 627
Score = 41.9 bits (94), Expect = 4e-04
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Frame = +3
Query: 372 LGIESHAGFFTVDEKFN-SNMYFWYFPPLSKNEAAPVLLWLQGGPGAAPYSGSLRKSGR- 545
+ + +AG+ D N +N+++W +LLW+ GGPG + G +++ G
Sbjct: 44 VNFKQYAGYLNSDPNKNYNNLHYWLIESQLTPSNDTLLLWINGGPGCSSVFGQIQEIGPF 103
Query: 546 --*SQARTVLPKESIIGAKNYHLIFIDNPVGTGFSFTD---KDEGYCT 674
S ++TV + K +L+ ID P G GFS+ +D+ Y T
Sbjct: 104 HVSSDSQTVY-ENVFAWNKVSNLLAIDGP-GAGFSWQQNLFQDDSYVT 149
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 57.6 bits (133), Expect = 8e-09
Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 5/145 (3%)
Frame = +3
Query: 264 ARPNDSAGDP--LMLTPFLKNESIALAQELSRVSLTETLGIESHAGFFTVDEKFNSNMYF 437
A P A D + P N++ LS LT + +G+ T DE +++++
Sbjct: 999 AEPGTIAADEHGSQIYPTALNDAAKADMILSLPGLTFNVTYRMFSGYLTADETPLNHLFY 1058
Query: 438 WYFPPLSKNEAAPVLLWLQGGPGAAPYSGSLRKSG---R*SQARTVLPKESIIGAKNYHL 608
W+ + PV+LWL GGPG + G + G L + K ++
Sbjct: 1059 WFVESQNDPVNDPVVLWLNGGPGCSSLGGFFTELGPFHPNDDGGQTLYENVFSWNKKANV 1118
Query: 609 IFIDNPVGTGFSFTDKDEGYCTDET 683
IF++ P GFS+T+ Y D+T
Sbjct: 1119 IFLEAPAKVGFSYTEDPNYYWDDDT 1143
Score = 52.0 bits (119), Expect = 4e-07
Identities = 42/180 (23%), Positives = 84/180 (46%), Gaps = 10/180 (5%)
Frame = +3
Query: 204 YFVPAERR*ISECLSTSKLDARPNDS--AG---DPLMLTPFLKNESIALAQE---LSRVS 359
+FVP++R + + T+ L + N S AG P LT + + Q ++
Sbjct: 1496 HFVPSDRPAQALQMLTNFLSNQANYSTPAGIDVTPQPLTNVISQTNCTTGQTDRIINLPG 1555
Query: 360 LTETLGIESHAGFFTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGAAPYSGSLRKS 539
L + + ++GF +D +++W + P+LLWL GGPG++ G ++
Sbjct: 1556 LPADMLFKQYSGF--LDGLSGHKVHYWLVESENNPSTDPLLLWLNGGPGSSSLMGLFEEN 1613
Query: 540 G--R*SQARTVLPKESIIGAKNYHLIFIDNPVGTGFSFTDKDEGYCTDETCIAKGLFAAM 713
G R S+ L + K +++++++P+G G+S+ + D+ A+ +AA+
Sbjct: 1614 GPFRVSKDSQTLSRNPYSWNKFANVLYLESPIGVGYSYAYNNTNIQYDDVTTAQENYAAL 1673
Score = 44.4 bits (100), Expect = 8e-05
Identities = 26/120 (21%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Frame = +3
Query: 360 LTETLGIESHAGFFTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGAAPYSGSLRKS 539
LT + ++G+ + ++W+ + +PVLLWL GGPG++ G L ++
Sbjct: 510 LTYQINFNQYSGYLNASD--THRFHYWFVESQNDPTNSPVLLWLNGGPGSSSLWGMLTEN 567
Query: 540 G--R*SQARTVLPKESIIGAKNYHLIFIDNPVGTGFSFTDKDEGYCTDETCIAKGLFAAM 713
G R ++ L + K +++++++P G+S++ Y + A + A+
Sbjct: 568 GPFRPNKDGQTLYENVHSWNKFANVLYLESPHQVGYSYSTVANDYTYGDDLTASDNYNAL 627
Score = 41.9 bits (94), Expect = 4e-04
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Frame = +3
Query: 372 LGIESHAGFFTVDEKFN-SNMYFWYFPPLSKNEAAPVLLWLQGGPGAAPYSGSLRKSGR- 545
+ + +AG+ D N +N+++W +LLW+ GGPG + G +++ G
Sbjct: 44 VNFKQYAGYLNSDPNKNYNNLHYWLIESQLTPSNDTLLLWINGGPGCSSVFGQIQEIGPF 103
Query: 546 --*SQARTVLPKESIIGAKNYHLIFIDNPVGTGFSFTD---KDEGYCT 674
S ++TV + K +L+ ID P G GFS+ +D+ Y T
Sbjct: 104 HVSSDSQTVY-ENVFAWNKVSNLLAIDGP-GAGFSWQQNLFQDDSYVT 149
>Z49127-6|CAA88947.1| 454|Caenorhabditis elegans Hypothetical
protein F13D12.6 protein.
Length = 454
Score = 53.2 bits (122), Expect = 2e-07
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Frame = +3
Query: 381 ESHAGFFTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGAAPYSGSLRKSG--R*SQ 554
+ ++G++ V K N +++W+ S PVLLWL GGPG + S L + G +
Sbjct: 36 KQYSGYYNVGTKKNHMLHYWFVESQSNPSTDPVLLWLTGGPGCSGLSALLTEWGPWNVNT 95
Query: 555 ARTVLPKESIIGAKNYHLIFIDNPVGTGFSF-TDKDEGYCTDET 683
L KN ++ ++ P G G+S+ TD + D+T
Sbjct: 96 DGATLRTNPYSWNKNASILTLEAPAGVGYSYATDNNIATGDDQT 139
>U23521-6|AAC46812.1| 469|Caenorhabditis elegans Hypothetical
protein F41C3.5 protein.
Length = 469
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Frame = +3
Query: 387 HAGFFTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGAAPYSGSLRKSGR--*SQAR 560
++GFF V + N +++W+ ++ P++ W GGPG + G L + G ++
Sbjct: 34 YSGFFQVSD--NHVLHYWFVESQNEPSNDPLIFWFNGGPGCSSLDGLLNEMGPYVANEDG 91
Query: 561 TVLPKESIIGAKNYHLIFIDNPVGTGFSF 647
L + K +++I++P G G+S+
Sbjct: 92 KTLRENEYSWNKMASVVYIESPAGVGYSY 120
>U20864-3|AAC46662.1| 574|Caenorhabditis elegans Hypothetical
protein F32A5.3 protein.
Length = 574
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/99 (22%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Frame = +3
Query: 381 ESHAGFFTVDEKFNSNMYFWYFPPLSKNEAAPVLLWLQGGPGAAPYSGSLRKSGR---*S 551
+S++G+ + M++ S + P+L+W GGPG + G + G
Sbjct: 37 KSYSGYVDANANGTWKMHYMLTESRSNPDTDPLLVWFNGGPGCSSLGGLFEELGPFYVNF 96
Query: 552 QARTVLPKESIIGAKNYHLIFIDNPVGTGFSFTDKDEGY 668
+T+ AK +++++++P+G G+S+ GY
Sbjct: 97 DGQTLYENPYAWNAK-ANVLYLESPIGVGYSYDTTTPGY 134
>U28730-5|AAA68259.1| 470|Caenorhabditis elegans Hypothetical
protein K10B2.2a protein.
Length = 470
Score = 36.7 bits (81), Expect = 0.017
Identities = 20/98 (20%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
Frame = +3
Query: 429 MYFWYFPPLSKNEAAPVLLWLQGGPGAAPYSGSLRKSG--R*SQARTVLPKESIIGAKNY 602
+++W P++LWL GGPG + G + + G + K
Sbjct: 53 LHYWLTESSRAPTQDPLVLWLNGGPGCSSLDGLIEELGPFHVKDFGNSIYYNEYAWNKFA 112
Query: 603 HLIFIDNPVGTGFSFTDKDEGYCTDETCIAKGLFAAMD 716
+++F+++P G G+S++ +D+ A +D
Sbjct: 113 NVLFLESPAGVGYSYSTNFNLTVSDDEVSLHNYMALLD 150
>Z54342-1|CAA91143.1| 505|Caenorhabditis elegans Hypothetical
protein C08H9.1 protein.
Length = 505
Score = 32.3 bits (70), Expect = 0.36
Identities = 21/104 (20%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Frame = +3
Query: 378 IESHAGFFTVDEKFNSNMYFWYFPP--LSKNEAAPVLLWLQGGPGAAPYSGSLRKSGR*S 551
++ +G+ +E M+++ + EA+ +++W GGPG + S + G
Sbjct: 35 LKLQSGYLNANENGTQKMFYFLLEARDIPVGEAS-LIIWFNGGPGCSSLSAFFEEFG--- 90
Query: 552 QARTVLPKESIIGAKN--YH---LIFIDNPVGTGFSFTDKDEGY 668
+S+ + YH ++F+++P+G GFS+ + +
Sbjct: 91 PLYVNFGGKSLFENVHSWYHKANILFLESPIGVGFSYDTEQSNF 134
>AC024831-8|AAK72079.3| 362|Caenorhabditis elegans Serpentine
receptor, class t protein24 protein.
Length = 362
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 387 HAGFFTVDEKFNSNMYFWYFPPLSKN 464
+A FFT FNSN W+F PL N
Sbjct: 177 YAIFFTKTASFNSNYISWFFNPLLPN 202
>AF125972-1|AAD14770.2| 349|Caenorhabditis elegans Hypothetical
protein H25P19.1 protein.
Length = 349
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -3
Query: 570 AKPSLLAISGPTSVKSPNKELPRDLLAATAKPVQLRSSIK--AGNTKSTY 427
A P + IS PT KSP K PR + K L+ S++ G + +Y
Sbjct: 288 ATPGISIISSPTPPKSPPKSTPRTSKSTPPKRPYLKRSLEQARGGAQKSY 337
>U23515-7|AAK93859.3| 868|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform a protein.
Length = 868
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -2
Query: 379 IPSVSVNDTLDSSWARAMDSFLRNGVSMRGSPAESLGRASS 257
+P+VS D+L ++A F +NG + +P ES +ASS
Sbjct: 408 MPTVSGADSLPGPSSQAPQQFRQNGPAATAAPVESQPQASS 448
>U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform b protein.
Length = 1065
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -2
Query: 379 IPSVSVNDTLDSSWARAMDSFLRNGVSMRGSPAESLGRASS 257
+P+VS D+L ++A F +NG + +P ES +ASS
Sbjct: 605 MPTVSGADSLPGPSSQAPQQFRQNGPAATAAPVESQPQASS 645
>Z36753-11|CAE17918.1| 68|Caenorhabditis elegans Hypothetical
protein T09A5.14 protein.
Length = 68
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -3
Query: 243 NIRKFSAVQREQSRKKQNTRHCAQQRLPFHSHH 145
+IR F +++ R + + +QRLP H HH
Sbjct: 21 DIRDFEVIRQNAVRNIASLENILEQRLPSHRHH 53
>AC024831-6|AAY86308.1| 351|Caenorhabditis elegans Hypothetical
protein Y55F3C.10 protein.
Length = 351
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 396 FFTVDEKFNSNMYFWYFPPLSKNEAAP 476
FFT FNSN W+F P+ AP
Sbjct: 171 FFTKPLLFNSNYMSWFFNPMIPGNEAP 197
>AF067950-6|AAG24156.2| 372|Caenorhabditis elegans Serpentine
receptor, class w protein122 protein.
Length = 372
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 409 TRSSIQICTFGISRLYRRTKLHRFCCGC 492
T + + +C F +S YR T +H F CGC
Sbjct: 322 TCTHLFVCLF-MSSQYRSTTIHVFTCGC 348
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 558 RTVLPKESIIGAKNYHLIFIDNPVGTGFSF 647
R VL + + +N+H I+ P+G G SF
Sbjct: 65 REVLGNQLVAAIRNHHFAIIEGPLGCGKSF 94
>Z99102-2|CAB11775.1| 499|Caenorhabditis elegans Hypothetical
protein B0331.1 protein.
Length = 499
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Frame = -1
Query: 308 WRQHERIPR*VIRSSVQLTRG*TFGNLAPFSGN-----KVEKNKTHGTALSRGFHFTAI 147
W + + ++ SS ++ +G + L P+ G K EK K+H L+ FHF +
Sbjct: 89 WPLNGKTAATILESSTEVNKGDDYAFLVPWLGGGLLMEKGEKWKSHRRILTPAFHFAKL 147
>Z75527-8|CAA99778.2| 316|Caenorhabditis elegans Hypothetical
protein C15C8.6 protein.
Length = 316
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +3
Query: 39 YIYLKTLVTKTPFNNYSIRNIILIIRTNCF-KLLTRHDG-CEMEASAERSAVCFVFFYFV 212
+IYL + P +S+ + +I F K T DG E E A R +C +FFY +
Sbjct: 179 FIYLVAFII-VPTTLFSLIALSFLIYKKLFQKPHTSEDGEDEDETDAPRETICSLFFYII 237
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,818,540
Number of Sequences: 27780
Number of extensions: 326501
Number of successful extensions: 863
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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